RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 PIP5K1AQ99755 562 aa9.59□□□□□ -0.87
SF3A1-203ENST00000444440 WFDC6Q9BQY6 131 aa9.59□□□□□ -0.87
SF3A1-203ENST00000444440 TACO1Q9BSH4 297 aaKnown RBP9.59□□□□□ -0.87
SF3A1-203ENST00000444440 HDHD5Q9BXW7 423 aa9.59□□□□□ -0.87
SF3A1-203ENST00000444440 BCL2L10Q9HD36 194 aa9.59□□□□□ -0.87
SF3A1-203ENST00000444440 A4GALTQ9NPC4 353 aa9.59□□□□□ -0.87
SF3A1-203ENST00000444440 ZNF232Q9UNY5 417 aa9.59□□□□□ -0.87
SF3A1-203ENST00000444440 TRAPPC4Q9Y296 219 aa9.59□□□□□ -0.87
SF3A1-203ENST00000444440 NOSIPQ9Y314 301 aaKnown RBP9.59□□□□□ -0.87
SF3A1-203ENST00000444440 FLVCR1Q9Y5Y0 555 aa9.59□□□□□ -0.87
SF3A1-203ENST00000444440 SPIN1Q9Y657 262 aaPredicted RBP9.59□□□□□ -0.87
SF3A1-203ENST00000444440 NSD1Q96L73 2696 aaPredicted RBP9.59□□□□□ -0.88
SF3A1-203ENST00000444440 A0A0G2JPF8 293 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 A0A1W2PP18 115 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 LIPT2A6NK58 231 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 EVPLLA8MZ36 301 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 TMEM229AB2RXF0 380 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 HNRNPCL2B2RXH8 293 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 HNRNPCL3B7ZW38 293 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 PDLIM1O00151 329 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 DNPH1O43598 174 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 TPST1O60507 370 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 HNRNPCL1O60812 293 aaKnown RBP9.58□□□□□ -0.88
SF3A1-203ENST00000444440 SMPD2O60906 423 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 RAD51DO75771 328 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 AKR7A3O95154 331 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 PGM3O95394 542 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 HNRNPCL4P0DMR1 293 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 HOXB4P17483 251 aaPredicted RBP9.58□□□□□ -0.88
SF3A1-203ENST00000444440 HTR2AP28223 471 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 HTR3AP46098 478 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 PTH2RP49190 550 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 CLK1P49759 484 aaKnown RBP9.58□□□□□ -0.88
SF3A1-203ENST00000444440 ARFIP2P53365 341 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 SLC25A3Q00325 362 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 EGR4Q05215 589 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 BSPH1Q075Z2 132 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 LGALS3BPQ08380 585 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 CEACAM7Q14002 265 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 SELPLGQ14242 412 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 CAPRIN1Q14444 709 aaKnown RBP9.58□□□□□ -0.88
SF3A1-203ENST00000444440 SLC17A1Q14916 467 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 P2RY6Q15077 328 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 OR7A5Q15622 319 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 ADAM5Q6NVV9 412 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 DLEU7Q6UYE1 221 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 C20orf204Q6ZNR8 217 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 Q71RC1 249 aaPredicted RBP9.58□□□□□ -0.88
SF3A1-203ENST00000444440 P3H2Q8IVL5 708 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 ZNF100Q8IYN0 542 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 LRRC75A-AS1Q8N1F1 130 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 ZIC4Q8N9L1 334 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 NFKBIDQ8NI38 313 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 PIGXQ8TBF5 258 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 TSPEARQ8WU66 669 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 PIGTQ969N2 578 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 C3orf49Q96BT1 292 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 DDIT4LQ96D03 193 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 Q96MF0 132 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 ZNF385AQ96PM9 386 aaKnown RBP9.58□□□□□ -0.88
SF3A1-203ENST00000444440 CPPED1Q9BRF8 314 aaPredicted RBP9.58□□□□□ -0.88
SF3A1-203ENST00000444440 PRR14Q9BWN1 585 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 SPATA9Q9BWV2 254 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 POTEKPQ9BYX7 375 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 ARMC7Q9H6L4 198 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 SEC14L4Q9UDX3 406 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 PRDM4Q9UKN5 801 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 CORO2BQ9UQ03 480 aa9.58□□□□□ -0.88
SF3A1-203ENST00000444440 TRIM64A6NGJ6 449 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 TRIM64BA6NI03 449 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 CLOCKO15516 846 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 NPIPB7O75200 414 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 SOD3P08294 240 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 DANCRP0C864 163 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 NR1H2P55055 460 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 SLC35A1P78382 337 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 SPOCK1Q08629 439 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 FAPQ12884 760 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 FADDQ13158 208 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 LARS2Q15031 903 aaKnown RBP9.57□□□□□ -0.88
SF3A1-203ENST00000444440 PPA1Q15181 289 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 ADRM1Q16186 407 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 ZSWIM7Q19AV6 140 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 PGGHGQ32M88 737 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 ZNF311Q5JNZ3 666 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 OTUD3Q5T2D3 398 aaPredicted RBP9.57□□□□□ -0.88
SF3A1-203ENST00000444440 TSPO2Q5TGU0 170 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 C9orf135Q5VTT2 229 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 SHEQ5VZ18 495 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 FBXW9Q5XUX1 488 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 WBP2NLQ6ICG8 309 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 PAQR6Q6TCH4 344 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 YTHDF3Q7Z739 585 aaKnown RBP9.57□□□□□ -0.88
SF3A1-203ENST00000444440 RETREG3Q86VR2 466 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 ZNF440Q8IYI8 595 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 ZNF611Q8N823 705 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 OR52N5Q8NH56 324 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 HSD17B8Q92506 261 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 APH1AQ96BI3 265 aa9.57□□□□□ -0.88
SF3A1-203ENST00000444440 ZHX1-C8orf76Q96EF9 292 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms