RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 ZNF474Q6S9Z5 364 aaPredicted RBP7.84□□□□□ -1.15
USP6NL-203ENST00000443016 GTF2IRD2Q86UP8 949 aa7.84□□□□□ -1.15
USP6NL-203ENST00000443016 ZNF610Q8N9Z0 462 aa7.84□□□□□ -1.15
USP6NL-203ENST00000443016 ATP6V1C2Q8NEY4 427 aa7.84□□□□□ -1.15
USP6NL-203ENST00000443016 OSTF1Q92882 214 aa7.84□□□□□ -1.15
USP6NL-203ENST00000443016 ZC3HAV1LQ96H79 300 aaKnown RBP7.84□□□□□ -1.15
USP6NL-203ENST00000443016 KLHL15Q96M94 604 aa7.84□□□□□ -1.15
USP6NL-203ENST00000443016 FOXC2Q99958 501 aa7.84□□□□□ -1.15
USP6NL-203ENST00000443016 TRIM15Q9C019 465 aa7.84□□□□□ -1.15
USP6NL-203ENST00000443016 KAT8Q9H7Z6 458 aaKnown RBP7.84□□□□□ -1.15
USP6NL-203ENST00000443016 EXD2Q9NVH0 621 aa7.84□□□□□ -1.15
USP6NL-203ENST00000443016 CMTM6Q9NX76 183 aa7.84□□□□□ -1.15
USP6NL-203ENST00000443016 ELOVL5Q9NYP7 299 aa7.84□□□□□ -1.15
USP6NL-203ENST00000443016 DTNAQ9Y4J8 743 aa7.84□□□□□ -1.15
USP6NL-203ENST00000443016 A0A1W2PPH5 198 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 C7orf72A4D263 438 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 GJE1A6NN92 205 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 C5orf58C9J3I9 102 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 ADAMDEC1O15204 470 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 GSTA4O15217 222 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 ZNF264O43296 627 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 STX11O75558 287 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 B3GALNT1O75752 331 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 PDE5AO76074 875 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 AK1P00568 194 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 RAF1P04049 648 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 HRGP04196 525 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 PABPC4LP0CB38 370 aaKnown RBP7.84□□□□□ -1.16
USP6NL-203ENST00000443016 NQO1P15559 274 aaKnown RBP7.84□□□□□ -1.16
USP6NL-203ENST00000443016 UGT2B10P36537 528 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 SLC6A8P48029 635 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 GSK3BP49841 420 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 RBBP4Q09028 425 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 FOXF1Q12946 379 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 EXOSC6Q5RKV6 272 aaKnown RBP7.84□□□□□ -1.16
USP6NL-203ENST00000443016 ZNF362Q5T0B9 420 aaPredicted RBP7.84□□□□□ -1.16
USP6NL-203ENST00000443016 PDZK1Q5T2W1 519 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 STK32CQ86UX6 486 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 C11orf65Q8NCR3 313 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 TOR1AIP2Q8NFQ8 470 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 OR10A6Q8NH74 314 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 MIPOL1Q8TD10 442 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 XAGE5Q8WWM1 108 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 CCDC124Q96CT7 223 aaKnown RBP7.84□□□□□ -1.16
USP6NL-203ENST00000443016 GMPPAQ96IJ6 420 aaPredicted RBP7.84□□□□□ -1.16
USP6NL-203ENST00000443016 WFIKKN1Q96NZ8 548 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 SDF2Q99470 211 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 CACYBPQ9HB71 228 aaKnown RBP7.84□□□□□ -1.16
USP6NL-203ENST00000443016 C6orf203Q9P0P8 240 aaPredicted RBP7.84□□□□□ -1.16
USP6NL-203ENST00000443016 P2RX2Q9UBL9 471 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 MAGEL2Q9UJ55 1249 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 PRDM4Q9UKN5 801 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 MKLN1Q9UL63 735 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 ANGPT4Q9Y264 503 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 LRCH1Q9Y2L9 728 aa7.84□□□□□ -1.16
USP6NL-203ENST00000443016 GPC6Q9Y625 555 aaPredicted RBP7.84□□□□□ -1.16
USP6NL-203ENST00000443016 ZNF469Q96JG9 3925 aaPredicted RBP7.83□□□□□ -1.16
USP6NL-203ENST00000443016 A0A0J9YW62 118 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 ELOVL7A1L3X0 281 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 LINGO3P0C6S8 592 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 UBL4AP11441 157 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 ADH6P28332 368 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 SLC7A1P30825 629 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 SUMO3P55854 103 aaPredicted RBP7.83□□□□□ -1.16
USP6NL-203ENST00000443016 SELPLGQ14242 412 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 PPA1Q15181 289 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 NDUFAF6Q330K2 333 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 LINC01559Q495D7 138 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 ANKRD34AQ69YU3 496 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 TNFAIP8L2Q6P589 184 aaPredicted RBP7.83□□□□□ -1.16
USP6NL-203ENST00000443016 PAMR1Q6UXH9 720 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 ZNF550Q7Z398 422 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 RNF148Q8N7C7 305 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 CLRN3Q8NCR9 226 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 OR6K3Q8NGY3 331 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 OR51I1Q9H343 314 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 IKZF5Q9H5V7 419 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 PLSCR4Q9NRQ2 329 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 GLRX2Q9NS18 164 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 ICAM5Q9UMF0 924 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 ARID1AO14497 2285 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 PRORSD1PA6NEY8 169 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 VGLL3A8MV65 326 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 H0YHG0 523 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 FCMRO60667 390 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 TPPPO94811 219 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 UBTFL6P0CB48 400 aaPredicted RBP7.83□□□□□ -1.16
USP6NL-203ENST00000443016 BMP2P12643 396 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 ETFAP13804 333 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 TCN1P20061 433 aaPredicted RBP7.83□□□□□ -1.16
USP6NL-203ENST00000443016 IL11P20809 199 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 PSMA4P25789 261 aaKnown RBP7.83□□□□□ -1.16
USP6NL-203ENST00000443016 ELK4P28324 431 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 PCGF2P35227 344 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 CBFBQ13951 182 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 CEACAM7Q14002 265 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 CTU2Q2VPK5 515 aaKnown RBP7.83□□□□□ -1.16
USP6NL-203ENST00000443016 TMEM176BQ3YBM2 270 aaPredicted RBP7.83□□□□□ -1.16
USP6NL-203ENST00000443016 C1orf146Q5VVC0 180 aa7.83□□□□□ -1.16
USP6NL-203ENST00000443016 NET1Q7Z628 596 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms