RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 HDDC2Q7Z4H3 204 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 OR52E2Q8NGJ4 325 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 OR5M3Q8NGP4 307 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 HAVCR2Q8TDQ0 301 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 GPR119Q8TDV5 335 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 RNF31Q96EP0 1072 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 GPX7Q96SL4 187 aaPredicted RBP5.49□□□□□ -1.53
VPS50-205ENST00000441602 JAM3Q9BX67 310 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 NAA50Q9GZZ1 169 aaKnown RBP5.49□□□□□ -1.53
VPS50-205ENST00000441602 SACM1LQ9NTJ5 587 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 GRHPRQ9UBQ7 328 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 MOKQ9UQ07 419 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 HIF3AQ9Y2N7 669 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 B3GALT1Q9Y5Z6 326 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 COL5A1P20908 1838 aaPredicted RBP5.49□□□□□ -1.53
VPS50-205ENST00000441602 ASXL3Q9C0F0 2248 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 IGHV1-45A0A0A0MS14 117 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 LOC100506127A0A0U1RQW1 187 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 C4orf47A7E2U8 309 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 BLOC1S5-TXNDC5H3BN57 136 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 CLPXO76031 633 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 MT-ND5P03915 603 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 TCN2P20062 427 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 GADD45AP24522 165 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 EIF1P41567 113 aaKnown RBP5.49□□□□□ -1.53
VPS50-205ENST00000441602 FBXW4P57775 412 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 BDH1Q02338 343 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 DNASE1L3Q13609 305 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 CRMP1Q14194 572 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 TRAM1Q15629 374 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 MOGQ16653 247 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 C1orf140Q5VVS0 124 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 CDCP2Q5VXM1 449 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 ZNF544Q6NX49 715 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 DNM1P34Q6PK57 102 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 CBLN3Q6UW01 205 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 RPS19BP1Q86WX3 136 aaKnown RBP5.49□□□□□ -1.53
VPS50-205ENST00000441602 SLC37A3Q8NCC5 494 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 OR10H4Q8NGA5 316 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 OR51G2Q8NGK0 314 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 MOSPD2Q8NHP6 518 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 ELP5Q8TE02 316 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 SLC25A43Q8WUT9 341 aaPredicted RBP5.49□□□□□ -1.53
VPS50-205ENST00000441602 MRGPRX4Q96LA9 322 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 CNN2Q99439 309 aaKnown RBP5.49□□□□□ -1.53
VPS50-205ENST00000441602 GPR87Q9BY21 358 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 WDR12Q9GZL7 423 aaKnown RBP5.49□□□□□ -1.53
VPS50-205ENST00000441602 DCSTAMPQ9H295 470 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 LIN28AQ9H9Z2 209 aaKnown RBP5.49□□□□□ -1.53
VPS50-205ENST00000441602 HMG20AQ9NP66 347 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 TRIM36Q9NQ86 728 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 INIPQ9NRY2 104 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 HPF1Q9NWY4 346 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 CRNNQ9UBG3 495 aaPredicted RBP5.49□□□□□ -1.53
VPS50-205ENST00000441602 TEKT2Q9UIF3 430 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 STUB1Q9UNE7 303 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 A0A1W2PRG6 482 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 TRIM64BA6NI03 449 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 A6NIZ1 184 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 PRR33A8MZF0 331 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 PRKNO60260 465 aaPredicted RBP5.49□□□□□ -1.53
VPS50-205ENST00000441602 OR2J2O76002 312 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 NTN1O95631 604 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 S100A5P33763 92 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 CASRP41180 1078 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 SLC25A1P53007 311 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 RAP1BP61224 184 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 LSM3P62310 102 aaKnown RBP5.49□□□□□ -1.53
VPS50-205ENST00000441602 RAP1AP62834 184 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 INSM1Q01101 510 aaPredicted RBP5.49□□□□□ -1.53
VPS50-205ENST00000441602 SPEM2Q0P670 501 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 ZNF846Q147U1 533 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 NTRK2Q16620 822 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 JMJD6Q6NYC1 403 aaPredicted RBP5.49□□□□□ -1.53
VPS50-205ENST00000441602 POMZP3Q6PJE2 187 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 APOOLQ6UXV4 268 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 SLC16A12Q6ZSM3 486 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 OR2T4Q8NH00 348 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 OR5J2Q8NH18 312 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 CT55Q8WUE5 264 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 BORCS5Q969J3 196 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 PMEPA1Q969W9 287 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 KIAA1143Q96AT1 154 aaPredicted RBP5.49□□□□□ -1.53
VPS50-205ENST00000441602 MNTQ99583 582 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 CHCHD6Q9BRQ6 235 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 POTEKPQ9BYX7 375 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 CPNE5Q9HCH3 593 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 HAO2Q9NYQ3 351 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 CCDC59Q9P031 241 aaKnown RBP5.49□□□□□ -1.53
VPS50-205ENST00000441602 IL20RAQ9UHF4 553 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 WIF1Q9Y5W5 379 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 A3GALT2U3KPV4 340 aa5.49□□□□□ -1.53
VPS50-205ENST00000441602 ADAMTS20P59510 1910 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 A0A1W2PQ72 361 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 MCIDASD6RGH6 385 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 ZNF670-ZNF695F2Z2N8 137 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 M0R082 166 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 SOCS6O14544 535 aa5.48□□□□□ -1.53
VPS50-205ENST00000441602 ZNF208O43345 1280 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms