RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 GFOD2Q3B7J2 385 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 FAM46CQ5VWP2 391 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 C16orf54Q6UWD8 224 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 DEFB128Q7Z7B8 93 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 CPXM2Q8N436 756 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 DNAAF1Q8NEP3 725 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 SYNPRQ8TBG9 265 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 RGMAQ96B86 450 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 NKX6-2Q9C056 277 aaPredicted RBP10.83□□□□□ -0.68
SMPD4-209ENST00000439886 RIMS4Q9H426 269 aaPredicted RBP10.83□□□□□ -0.68
SMPD4-209ENST00000439886 FN3KQ9H479 309 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 ANKRD19PQ9H560 264 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 CWH43Q9H720 699 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 MKI67P46013 3256 aaKnown RBP10.83□□□□□ -0.68
SMPD4-209ENST00000439886 DOCK6Q96HP0 2047 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 F5H5P2 479 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 K7ESM1 405 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 GPR31O00270 319 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 FOXE1O00358 373 aaPredicted RBP10.83□□□□□ -0.68
SMPD4-209ENST00000439886 ABCD4O14678 606 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 OIP5O43482 229 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 MAS1P04201 325 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 SPP1P10451 314 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 ELAVL2Q12926 359 aaKnown RBP10.83□□□□□ -0.68
SMPD4-209ENST00000439886 SSPNQ14714 243 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 C9orf131Q5VYM1 1079 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 USP53Q70EK8 1073 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 LRRC56Q8IYG6 542 aaPredicted RBP10.83□□□□□ -0.68
SMPD4-209ENST00000439886 SDR9C7Q8NEX9 313 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 PXT1Q8NFP0 134 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 OR9A2Q8NGT5 310 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 ACOT11Q8WXI4 607 aaPredicted RBP10.83□□□□□ -0.68
SMPD4-209ENST00000439886 TIFAQ96CG3 184 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 KCTD12Q96CX2 325 aaKnown RBP10.83□□□□□ -0.68
SMPD4-209ENST00000439886 ALG14Q96F25 216 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 TMEM231Q9H6L2 316 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 FKRPQ9H9S5 495 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 ZNF334Q9HCZ1 680 aaPredicted RBP10.83□□□□□ -0.68
SMPD4-209ENST00000439886 KRCC1Q9NPI7 259 aaPredicted RBP10.83□□□□□ -0.68
SMPD4-209ENST00000439886 MARCH5Q9NX47 278 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 GHRLQ9UBU3 117 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 NDOR1Q9UHB4 597 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 PATJQ8NI35 1801 aa10.83□□□□□ -0.68
SMPD4-209ENST00000439886 UNC119BA6NIH7 251 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 RHPN2P1A8MT19 583 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 NPIPB8E9PQR5 432 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 PYCARD-AS1I3L0S3 204 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 SERPINA3P01011 423 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 EPXP11678 715 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 ELNP15502 786 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 OMPP47874 163 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 RNLSQ5VYX0 342 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 RNF44Q7L0R7 432 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 GDF7Q7Z4P5 450 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 CBLN2Q8IUK8 224 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 GID4Q8IVV7 300 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 PRSS58Q8IYP2 241 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 NUP43Q8NFH3 380 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 APOBEC4Q8WW27 367 aaKnown RBP10.82□□□□□ -0.68
SMPD4-209ENST00000439886 TFGQ92734 400 aaPredicted RBP10.82□□□□□ -0.68
SMPD4-209ENST00000439886 SGIP1Q9BQI5 828 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 ADAP2Q9NPF8 381 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 NOX4Q9NPH5 578 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 MRPL17Q9NRX2 175 aaKnown RBP10.82□□□□□ -0.68
SMPD4-209ENST00000439886 SIRT3Q9NTG7 399 aaPredicted RBP10.82□□□□□ -0.68
SMPD4-209ENST00000439886 COMMD9Q9P000 198 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 CAMK2AQ9UQM7 478 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 PLEKHA6Q9Y2H5 1048 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 ZNF705EA8MWA4 302 aaPredicted RBP10.82□□□□□ -0.68
SMPD4-209ENST00000439886 AIPO00170 330 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 F12P00748 615 aaPredicted RBP10.82□□□□□ -0.68
SMPD4-209ENST00000439886 ATP1B1P05026 303 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 S100A8P05109 93 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 GTF2F2P13984 249 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 LUMP51884 338 aaPredicted RBP10.82□□□□□ -0.68
SMPD4-209ENST00000439886 TAS2R38P59533 333 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 RAB33AQ14088 237 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 CLINT1Q14677 625 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 ALG11Q2TAA5 492 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 LIN54Q6MZP7 749 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 FAM83HQ6ZRV2 1179 aaPredicted RBP10.82□□□□□ -0.68
SMPD4-209ENST00000439886 TMEM25Q86YD3 366 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 C10orf53Q8N6V4 93 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 OR52E2Q8NGJ4 325 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 POC1BQ8TC44 478 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 BRIX1Q8TDN6 353 aaKnown RBP10.82□□□□□ -0.68
SMPD4-209ENST00000439886 S100PBPQ96BU1 408 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 TEAD3Q99594 435 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 JAM3Q9BX67 310 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 REG4Q9BYZ8 158 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 CA5BQ9Y2D0 317 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 ZNF729A6NN14 1252 aaPredicted RBP10.82□□□□□ -0.68
SMPD4-209ENST00000439886 KIAA0355O15063 1070 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 RAD1O60671 282 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 APBB3O95704 486 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 THBS2P35442 1172 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 MMP15P51511 669 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 ART1P52961 327 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 IRF4Q15306 451 aa10.82□□□□□ -0.68
SMPD4-209ENST00000439886 SCGB2B2Q4G0G5 96 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 511.9 ms