RNA–Protein interactions for RNA: ENST00000439780.5

UBE2F-213, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-213ENST00000439780 TRAPPC4Q9Y296 219 aa9.33□□□□□ -0.92
UBE2F-213ENST00000439780 SH3GLB1Q9Y371 365 aa9.33□□□□□ -0.92
UBE2F-213ENST00000439780 ELOA3DA6NLF2 546 aaPredicted RBP9.32□□□□□ -0.92
UBE2F-213ENST00000439780 CPSF4LA6NMK7 179 aaKnown RBP9.32□□□□□ -0.92
UBE2F-213ENST00000439780 ZNF716A6NP11 495 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 B2RBV5 119 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 GSTA4O15217 222 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 FMO6PO60774 539 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 SMNDC1O75940 238 aaKnown RBP eCLIP9.32□□□□□ -0.92
UBE2F-213ENST00000439780 PLGP00747 810 aaPredicted RBP9.32□□□□□ -0.92
UBE2F-213ENST00000439780 GGT1P19440 569 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 FUT4P22083 530 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 EDNRAP25101 427 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 UQCRC1P31930 480 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 NTF4P34130 210 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 IDUAP35475 653 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 MSX2P35548 267 aaPredicted RBP9.32□□□□□ -0.92
UBE2F-213ENST00000439780 SELENOWP63302 87 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 CSNK2A1P68400 391 aaPredicted RBP9.32□□□□□ -0.92
UBE2F-213ENST00000439780 RASGEF1BQ0VAM2 473 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 CEACAM7Q14002 265 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 ELOA3BQ3SY89 546 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 ALG10BQ5I7T1 473 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 C1orf140Q5VVS0 124 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 ABLIM2Q6H8Q1 611 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 ULK3Q6PHR2 472 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 LINC00114Q6XXX2 140 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 WDR88Q6ZMY6 472 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 MEX3BQ6ZN04 569 aaKnown RBP9.32□□□□□ -0.92
UBE2F-213ENST00000439780 RINLQ6ZS11 566 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 VTCN1Q7Z7D3 282 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 RANBP3LQ86VV4 465 aaPredicted RBP9.32□□□□□ -0.92
UBE2F-213ENST00000439780 DMRTC2Q8IXT2 367 aaPredicted RBP9.32□□□□□ -0.92
UBE2F-213ENST00000439780 DEFB107AQ8IZN7 70 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 ZNF295-AS1Q8N0V1 137 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 ELOA3Q8NG57 546 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 STK35Q8TDR2 534 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 DNAJA4Q8WW22 397 aaPredicted RBP9.32□□□□□ -0.92
UBE2F-213ENST00000439780 PROX1Q92786 737 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 RNASE6Q93091 150 aaKnown RBP9.32□□□□□ -0.92
UBE2F-213ENST00000439780 TAAR8Q969N4 342 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 ZNF300Q96RE9 604 aaPredicted RBP9.32□□□□□ -0.92
UBE2F-213ENST00000439780 SPOCK3Q9BQ16 436 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 RBM24Q9BX46 236 aaKnown RBP9.32□□□□□ -0.92
UBE2F-213ENST00000439780 PCDHAC1Q9H158 963 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 PIGMQ9H3S5 423 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 EVA1AQ9H8M9 152 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 C12orf10Q9HB07 376 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 TMEM27Q9HBJ8 222 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 PLSCR4Q9NRQ2 329 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 GALNT8Q9NY28 637 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 KLHL13Q9P2N7 655 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 BAG5Q9UL15 447 aa9.32□□□□□ -0.92
UBE2F-213ENST00000439780 ITPR2Q14571 2701 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 A0A087WUJ7 227 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 FTCDNL1E5RQL4 147 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 MSTNO14793 375 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 DNPH1O43598 174 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 AKR7A3O95154 331 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 IFNA14P01570 189 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 YES1P07947 543 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 CD8BP10966 210 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 HSD17B1P14061 328 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 PRF1P14222 555 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 TCN1P20061 433 aaPredicted RBP9.31□□□□□ -0.92
UBE2F-213ENST00000439780 RPS5P46782 204 aaKnown RBP9.31□□□□□ -0.92
UBE2F-213ENST00000439780 P2RY4P51582 365 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 CTBP2P56545 445 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 NCALDP61601 193 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 SLC35A1P78382 337 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 LTBQ06643 244 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 FAM27E3Q08E93 113 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 RNPS1Q15287 305 aaKnown RBP9.31□□□□□ -0.92
UBE2F-213ENST00000439780 OR7A5Q15622 319 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 FXNQ16595 210 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 EEF1A1P5Q5VTE0 462 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 GTF2IRD2BQ6EKJ0 949 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 GLYATQ6IB77 296 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 ZNF613Q6PF04 617 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 CBLL1Q75N03 491 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 TSEN54Q7Z6J9 526 aaKnown RBP9.31□□□□□ -0.92
UBE2F-213ENST00000439780 GTF2IRD2Q86UP8 949 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 MCEMP1Q8IX19 187 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 SLC43A2Q8N370 569 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 TMEM99Q8N816 258 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 RBM15BQ8NDT2 890 aaKnown RBP9.31□□□□□ -0.92
UBE2F-213ENST00000439780 OR6K3Q8NGY3 331 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 RNF217Q8TC41 542 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 ADAMTS16Q8TE57 1224 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 RASSF5Q8WWW0 418 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 SLC47A1Q96FL8 570 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 TPD52L3Q96J77 140 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 PRSS27Q9BQR3 290 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 C12orf49Q9H741 205 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 BCO1Q9HAY6 547 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 GLRX2Q9NS18 164 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 PROCRQ9UNN8 238 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 EMC9Q9Y3B6 208 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 SNX13Q9Y5W8 968 aa9.31□□□□□ -0.92
UBE2F-213ENST00000439780 MPDZO75970 2070 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms