RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 IQGAP2Q13576 1575 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 NRKQ7Z2Y5 1582 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 BLMP54132 1417 aaPredicted RBP2.46□□□□□ -2.02
VPS41-207ENST00000439468 FGD6Q6ZV73 1430 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 C15orf38-AP3S2A0A0A6YYH1 394 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 A0A1W2PNV4 684 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 FAM231BA6NCW3 169 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 RGS16O15492 202 aaPredicted RBP2.46□□□□□ -2.02
VPS41-207ENST00000439468 RIPK2O43353 540 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 TPST2O60704 377 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 LYPLA1O75608 230 aaPredicted RBP2.46□□□□□ -2.02
VPS41-207ENST00000439468 IL1BP01584 269 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 IGHV3-48P01763 117 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 ZNF44P15621 663 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 ATP6V1B2P21281 511 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 DAP3P51398 398 aaKnown RBP2.46□□□□□ -2.02
VPS41-207ENST00000439468 AIF1P55008 147 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 IL24Q13007 206 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 GPM6BQ13491 265 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 DMRTC1Q5HYR2 192 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 OLFML2AQ68BL7 652 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 TMEM225Q6GV28 225 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 OR4F3Q6IEY1 312 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 CASC1Q6TDU7 716 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 TMEM179BQ7Z7N9 219 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 SVOPLQ8N434 492 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 DHRSXQ8N5I4 330 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 C14orf178Q8N769 122 aaPredicted RBP2.46□□□□□ -2.02
VPS41-207ENST00000439468 OR52I1Q8NGK6 324 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 RLN3Q8WXF3 142 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 RPUSD4Q96CM3 377 aaKnown RBP2.46□□□□□ -2.02
VPS41-207ENST00000439468 CCNL2Q96S94 520 aaPredicted RBP2.46□□□□□ -2.02
VPS41-207ENST00000439468 NIPSNAP3BQ9BS92 247 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 LRRN3Q9H3W5 708 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 VCPKMTQ9H867 229 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 APMAPQ9HDC9 416 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 UFSP2Q9NUQ7 469 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 PRO0461Q9UI25 63 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 PHF11Q9UIL8 331 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 CASZ1Q86V15 1759 aa2.46□□□□□ -2.02
VPS41-207ENST00000439468 ATP10BO94823 1461 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 RGPD1P0DJD0 1748 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 MARF1Q9Y4F3 1742 aaKnown RBP2.45□□□□□ -2.02
VPS41-207ENST00000439468 TIAM1Q13009 1591 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 GOLGB1Q14789 3259 aaKnown RBP2.45□□□□□ -2.02
VPS41-207ENST00000439468 E7ESA3 106 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 HDAC3O15379 428 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 ZNF208O43345 1280 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 MBTPS2O43462 519 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 CXCL13O43927 109 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 N4BP1O75113 896 aaKnown RBP2.45□□□□□ -2.02
VPS41-207ENST00000439468 UGT2B17O75795 530 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 ATP5LO75964 103 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 STAMBPO95630 424 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 RNH1P13489 461 aaKnown RBP2.45□□□□□ -2.02
VPS41-207ENST00000439468 GCFC2P16383 781 aaKnown RBP2.45□□□□□ -2.02
VPS41-207ENST00000439468 IMPDH1P20839 514 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 NTSP30990 170 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 TAGLN2P37802 199 aaKnown RBP2.45□□□□□ -2.02
VPS41-207ENST00000439468 PTGDSP41222 190 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 RIPPLY3P57055 190 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 ZNF45Q02386 682 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 CCDC173Q0VFZ6 552 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 VGLL4Q14135 290 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 GRB7Q14451 532 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 SLC15A2Q16348 729 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 NSUN5P1Q3KNT7 163 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 CFAP221Q4G0U5 840 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 PDZK1Q5T2W1 519 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 OR2G6Q5TZ20 316 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 CENPPQ6IPU0 288 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 UNQ9370/PRO34162Q6UXP9 181 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 TFAP2EQ6VUC0 442 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 ERI1Q8IV48 349 aaKnown RBP2.45□□□□□ -2.02
VPS41-207ENST00000439468 CCDC65Q8IXS2 484 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 SLC35F2Q8IXU6 374 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 ZCCHC7Q8N3Z6 543 aaKnown RBP2.45□□□□□ -2.02
VPS41-207ENST00000439468 OR5D13Q8NGL4 314 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 OR8J1Q8NGP2 316 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 SCFD1Q8WVM8 642 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 TCTEX1D2Q8WW35 142 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 CHCHD10Q8WYQ3 142 aaPredicted RBP2.45□□□□□ -2.02
VPS41-207ENST00000439468 DCUN1D4Q92564 292 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 FAM122AQ96E09 287 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 TIMD4Q96H15 378 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 MAGEB18Q96M61 343 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 SLC38A2Q96QD8 506 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 SLC35A5Q9BS91 424 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 CAPS2Q9BXY5 557 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 OR51J1Q9H342 316 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 ZNF385DQ9H6B1 395 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 STAP1Q9ULZ2 295 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 RASD1Q9Y272 281 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 MRPS7Q9Y2R9 242 aaKnown RBP2.45□□□□□ -2.02
VPS41-207ENST00000439468 UGT2A1Q9Y4X1 527 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 NINLQ9Y2I6 1382 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 A2ML1A8K2U0 1454 aa2.45□□□□□ -2.02
VPS41-207ENST00000439468 KDM5AP29375 1690 aaKnown RBP2.44□□□□□ -2.02
VPS41-207ENST00000439468 TRAV26-1A0A087WT03 109 aa2.44□□□□□ -2.02
VPS41-207ENST00000439468 IGHV7-81A0A0B4J1V7 117 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms