RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 CLEC4AQ9UMR7 237 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 CA5BQ9Y2D0 317 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 TRBV23OR9-2A0A075B6M9 112 aa15.06■□□□□ 0
CLCNKA-203ENST00000439316 GATBO75879 557 aaKnown RBP15.06■□□□□ 0
CLCNKA-203ENST00000439316 OR2T7P0C7T2 308 aa15.06■□□□□ 0
CLCNKA-203ENST00000439316 POLR2CP19387 275 aaPredicted RBP15.06■□□□□ 0
CLCNKA-203ENST00000439316 ACTR1BP42025 376 aa15.06■□□□□ 0
CLCNKA-203ENST00000439316 ACAA2P42765 397 aaKnown RBP15.06■□□□□ 0
CLCNKA-203ENST00000439316 EMDP50402 254 aa15.06■□□□□ 0
CLCNKA-203ENST00000439316 GBX2P52951 348 aaPredicted RBP15.06■□□□□ 0
CLCNKA-203ENST00000439316 HCCSP53701 268 aa15.06■□□□□ 0
CLCNKA-203ENST00000439316 ACTR1AP61163 376 aa15.06■□□□□ 0
CLCNKA-203ENST00000439316 ZP2Q05996 745 aa15.06■□□□□ 0
CLCNKA-203ENST00000439316 GSG1Q2KHT4 349 aa15.06■□□□□ 0
CLCNKA-203ENST00000439316 CDONQ4KMG0 1287 aa15.06■□□□□ 0
CLCNKA-203ENST00000439316 BTN2A1Q7KYR7 527 aa15.06■□□□□ 0
CLCNKA-203ENST00000439316 OVCH1Q7RTY7 1134 aa15.06■□□□□ 0
CLCNKA-203ENST00000439316 SYT9Q86SS6 491 aa15.06■□□□□ 0
CLCNKA-203ENST00000439316 TIGD4Q8IY51 512 aa15.06■□□□□ 0
CLCNKA-203ENST00000439316 ARL14Q8N4G2 192 aa15.06■□□□□ 0
CLCNKA-203ENST00000439316 OR11H4Q8NGC9 324 aa15.06■□□□□ 0
CLCNKA-203ENST00000439316 OR5T3Q8NGG3 340 aa15.06■□□□□ 0
CLCNKA-203ENST00000439316 OR8H1Q8NGG4 311 aa15.06■□□□□ 0
CLCNKA-203ENST00000439316 OR52E2Q8NGJ4 325 aa15.06■□□□□ 0
CLCNKA-203ENST00000439316 OR2T27Q8NH04 317 aa15.06■□□□□ 0
CLCNKA-203ENST00000439316 ASB12Q8WXK4 309 aa15.06■□□□□ 0
CLCNKA-203ENST00000439316 ZFP3Q96NJ6 502 aa15.06■□□□□ 0
CLCNKA-203ENST00000439316 ERMAPQ96PL5 475 aaPredicted RBP15.06■□□□□ 0
CLCNKA-203ENST00000439316 TTTY10Q9BZA0 68 aa15.06■□□□□ 0
CLCNKA-203ENST00000439316 TRIM2Q9C040 744 aa15.06■□□□□ 0
CLCNKA-203ENST00000439316 BRD7Q9NPI1 651 aa15.06■□□□□ 0
CLCNKA-203ENST00000439316 ZNF275Q9NSD4 429 aaPredicted RBP15.06■□□□□ 0
CLCNKA-203ENST00000439316 DNAJB12Q9NXW2 375 aaKnown RBP15.06■□□□□ 0
CLCNKA-203ENST00000439316 SCN2AQ99250 2005 aa15.06■□□□□ 0
CLCNKA-203ENST00000439316 LEUTXA8MZ59 168 aa15.05■□□□□ 0
CLCNKA-203ENST00000439316 CHURC1-FNTBB4DL54 471 aa15.05■□□□□ 0
CLCNKA-203ENST00000439316 H0Y8X5 98 aa15.05■□□□□ 0
CLCNKA-203ENST00000439316 TSC22D2O75157 780 aa15.05■□□□□ 0
CLCNKA-203ENST00000439316 SEMA4FO95754 770 aa15.05■□□□□ 0
CLCNKA-203ENST00000439316 CBX7O95931 251 aa15.05■□□□□ 0
CLCNKA-203ENST00000439316 TPOP07202 933 aa15.05■□□□□ 0
CLCNKA-203ENST00000439316 CXCL3P19876 107 aa15.05■□□□□ 0
CLCNKA-203ENST00000439316 IKZF1Q13422 519 aa15.05■□□□□ 0
CLCNKA-203ENST00000439316 DYRK1AQ13627 763 aa15.05■□□□□ 0
CLCNKA-203ENST00000439316 LINC00114Q6XXX2 140 aa15.05■□□□□ 0
CLCNKA-203ENST00000439316 CA13Q8N1Q1 262 aa15.05■□□□□ 0
CLCNKA-203ENST00000439316 SDR9C7Q8NEX9 313 aa15.05■□□□□ 0
CLCNKA-203ENST00000439316 OR10G6Q8NH81 332 aa15.05■□□□□ 0
CLCNKA-203ENST00000439316 SMIM4Q8WVI0 70 aa15.05■□□□□ 0
CLCNKA-203ENST00000439316 RERGQ96A58 199 aaPredicted RBP15.05■□□□□ 0
CLCNKA-203ENST00000439316 CMTM3Q96MX0 182 aa15.05■□□□□ 0
CLCNKA-203ENST00000439316 WDR92Q96MX6 357 aa15.05■□□□□ 0
CLCNKA-203ENST00000439316 CYP8B1Q9UNU6 501 aa15.05■□□□□ 0
CLCNKA-203ENST00000439316 PCDHGA9Q9Y5G4 932 aaKnown RBP15.05■□□□□ 0
CLCNKA-203ENST00000439316 MUC3AQ02505 3323 aa15.05■□□□□ -0
CLCNKA-203ENST00000439316 MEIKINA0A087WXM9 373 aa15.05■□□□□ -0
CLCNKA-203ENST00000439316 A0A1W2PPK0 400 aa15.05■□□□□ -0
CLCNKA-203ENST00000439316 OR6C74A6NCV1 312 aa15.05■□□□□ -0
CLCNKA-203ENST00000439316 MAGEB4O15481 346 aaPredicted RBP15.05■□□□□ -0
CLCNKA-203ENST00000439316 GUSBP08236 651 aa15.05■□□□□ -0
CLCNKA-203ENST00000439316 H2AFB2P0C5Z0 115 aa15.05■□□□□ -0
CLCNKA-203ENST00000439316 SULT1A3P0DMM9 295 aa15.05■□□□□ -0
CLCNKA-203ENST00000439316 SULT1A4P0DMN0 295 aa15.05■□□□□ -0
CLCNKA-203ENST00000439316 HIST1H1CP16403 213 aaKnown RBP15.05■□□□□ -0
CLCNKA-203ENST00000439316 NUDT1P36639 197 aa15.05■□□□□ -0
CLCNKA-203ENST00000439316 CCR6P51684 374 aa15.05■□□□□ -0
CLCNKA-203ENST00000439316 SIRPAP78324 504 aa15.05■□□□□ -0
CLCNKA-203ENST00000439316 CRYZQ08257 329 aaKnown RBP15.05■□□□□ -0
CLCNKA-203ENST00000439316 ESCO2Q56NI9 601 aa15.05■□□□□ -0
CLCNKA-203ENST00000439316 ALG10BQ5I7T1 473 aa15.05■□□□□ -0
CLCNKA-203ENST00000439316 SLC22A10Q63ZE4 541 aa15.05■□□□□ -0
CLCNKA-203ENST00000439316 RPL22L1Q6P5R6 122 aaKnown RBP15.05■□□□□ -0
CLCNKA-203ENST00000439316 ESPNLQ6ZVH7 1005 aa15.05■□□□□ -0
CLCNKA-203ENST00000439316 RD3Q7Z3Z2 195 aa15.05■□□□□ -0
CLCNKA-203ENST00000439316 FGD2Q7Z6J4 655 aa15.05■□□□□ -0
CLCNKA-203ENST00000439316 LUZP2Q86TE4 346 aa15.05■□□□□ -0
CLCNKA-203ENST00000439316 SLITRK4Q8IW52 837 aa15.05■□□□□ -0
CLCNKA-203ENST00000439316 SLC35F2Q8IXU6 374 aa15.05■□□□□ -0
CLCNKA-203ENST00000439316 LSMEM1Q8N8F7 131 aa15.05■□□□□ -0
CLCNKA-203ENST00000439316 FAM98AQ8NCA5 519 aaKnown RBP15.05■□□□□ -0
CLCNKA-203ENST00000439316 OR4K13Q8NH42 304 aa15.05■□□□□ -0
CLCNKA-203ENST00000439316 TSACCQ96A04 125 aaPredicted RBP15.05■□□□□ -0
CLCNKA-203ENST00000439316 ANKRD9Q96BM1 317 aaPredicted RBP15.05■□□□□ -0
CLCNKA-203ENST00000439316 GSDMCQ9BYG8 508 aa15.05■□□□□ -0
CLCNKA-203ENST00000439316 TMEM168Q9H0V1 697 aa15.05■□□□□ -0
CLCNKA-203ENST00000439316 NRIP3Q9NQ35 241 aa15.05■□□□□ -0
CLCNKA-203ENST00000439316 EVA1BQ9NVM1 165 aa15.05■□□□□ -0
CLCNKA-203ENST00000439316 WNT16Q9UBV4 365 aa15.05■□□□□ -0
CLCNKA-203ENST00000439316 MRPS17Q9Y2R5 130 aaKnown RBP15.05■□□□□ -0
CLCNKA-203ENST00000439316 ENTPD2Q9Y5L3 495 aa15.05■□□□□ -0
CLCNKA-203ENST00000439316 A0A1B0GVI7 797 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 TRABD2BA6NFA1 517 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.04■□□□□ -0
CLCNKA-203ENST00000439316 ZNF593O00488 134 aaPredicted RBP15.04■□□□□ -0
CLCNKA-203ENST00000439316 ZNF749O43361 778 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 GALR3O60755 368 aaPredicted RBP15.04■□□□□ -0
CLCNKA-203ENST00000439316 SLC22A5O76082 557 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 NDUFB2O95178 105 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 CRYZL1O95825 349 aa15.04■□□□□ -0
CLCNKA-203ENST00000439316 ANKRD34CP0C6C1 535 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms