RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 LSMEM1Q8N8F7 131 aa21.94■■□□□ 1.1
RAPGEF1-206ENST00000438647 OR10A6Q8NH74 314 aa21.94■■□□□ 1.1
RAPGEF1-206ENST00000438647 STK35Q8TDR2 534 aa21.94■■□□□ 1.1
RAPGEF1-206ENST00000438647 C10orf82Q8WW14 230 aa21.94■■□□□ 1.1
RAPGEF1-206ENST00000438647 LRRC58Q96CX6 371 aa21.94■■□□□ 1.1
RAPGEF1-206ENST00000438647 TRIM2Q9C040 744 aa21.94■■□□□ 1.1
RAPGEF1-206ENST00000438647 C6orf203Q9P0P8 240 aaPredicted RBP21.94■■□□□ 1.1
RAPGEF1-206ENST00000438647 TESQ9UGI8 421 aaKnown RBP21.94■■□□□ 1.1
RAPGEF1-206ENST00000438647 AKAP6Q13023 2319 aa21.94■■□□□ 1.1
RAPGEF1-206ENST00000438647 LIPT2A6NK58 231 aa21.93■■□□□ 1.1
RAPGEF1-206ENST00000438647 DEFB108AA8MXU0 73 aa21.93■■□□□ 1.1
RAPGEF1-206ENST00000438647 MRASO14807 208 aa21.93■■□□□ 1.1
RAPGEF1-206ENST00000438647 MFN2O95140 757 aa21.93■■□□□ 1.1
RAPGEF1-206ENST00000438647 IL32P24001 234 aa21.93■■□□□ 1.1
RAPGEF1-206ENST00000438647 RGS8P57771 180 aaPredicted RBP21.93■■□□□ 1.1
RAPGEF1-206ENST00000438647 ITGADQ13349 1161 aa21.93■■□□□ 1.1
RAPGEF1-206ENST00000438647 CEACAM7Q14002 265 aa21.93■■□□□ 1.1
RAPGEF1-206ENST00000438647 SFRP5Q5T4F7 317 aa21.93■■□□□ 1.1
RAPGEF1-206ENST00000438647 REP15Q6BDI9 236 aa21.93■■□□□ 1.1
RAPGEF1-206ENST00000438647 NANOGP8Q6NSW7 305 aa21.93■■□□□ 1.1
RAPGEF1-206ENST00000438647 CCDC103Q8IW40 242 aa21.93■■□□□ 1.1
RAPGEF1-206ENST00000438647 OR8J3Q8NGG0 315 aa21.93■■□□□ 1.1
RAPGEF1-206ENST00000438647 OR52E4Q8NGH9 312 aa21.93■■□□□ 1.1
RAPGEF1-206ENST00000438647 DNAJA4Q8WW22 397 aaPredicted RBP21.93■■□□□ 1.1
RAPGEF1-206ENST00000438647 KISS1RQ969F8 398 aaPredicted RBP21.93■■□□□ 1.1
RAPGEF1-206ENST00000438647 NANOGQ9H9S0 305 aa21.93■■□□□ 1.1
RAPGEF1-206ENST00000438647 GID8Q9NWU2 228 aa21.93■■□□□ 1.1
RAPGEF1-206ENST00000438647 ELOA3DA6NLF2 546 aaPredicted RBP21.92■■□□□ 1.1
RAPGEF1-206ENST00000438647 TMEM229AB2RXF0 380 aa21.92■■□□□ 1.1
RAPGEF1-206ENST00000438647 ZNF814B7Z6K7 855 aa21.92■■□□□ 1.1
RAPGEF1-206ENST00000438647 TPST1O60507 370 aa21.92■■□□□ 1.1
RAPGEF1-206ENST00000438647 ADAP00813 363 aa21.92■■□□□ 1.1
RAPGEF1-206ENST00000438647 DNASE1P24855 282 aa21.92■■□□□ 1.1
RAPGEF1-206ENST00000438647 BNIP2Q12982 314 aa21.92■■□□□ 1.1
RAPGEF1-206ENST00000438647 OR7A5Q15622 319 aa21.92■■□□□ 1.1
RAPGEF1-206ENST00000438647 ELOA3BQ3SY89 546 aa21.92■■□□□ 1.1
RAPGEF1-206ENST00000438647 GLIPR1L2Q4G1C9 344 aa21.92■■□□□ 1.1
RAPGEF1-206ENST00000438647 OTUD3Q5T2D3 398 aaPredicted RBP21.92■■□□□ 1.1
RAPGEF1-206ENST00000438647 C1orf140Q5VVS0 124 aa21.92■■□□□ 1.1
RAPGEF1-206ENST00000438647 C6orf89Q6UWU4 347 aa21.92■■□□□ 1.1
RAPGEF1-206ENST00000438647 PATL1Q86TB9 770 aaKnown RBP21.92■■□□□ 1.1
RAPGEF1-206ENST00000438647 SNX32Q86XE0 403 aa21.92■■□□□ 1.1
RAPGEF1-206ENST00000438647 ELOA3Q8NG57 546 aa21.92■■□□□ 1.1
RAPGEF1-206ENST00000438647 APH1AQ96BI3 265 aa21.92■■□□□ 1.1
RAPGEF1-206ENST00000438647 RSPO3Q9BXY4 272 aaPredicted RBP21.92■■□□□ 1.1
RAPGEF1-206ENST00000438647 PLEKHF2Q9H8W4 249 aa21.92■■□□□ 1.1
RAPGEF1-206ENST00000438647 SELENONQ9NZV5 590 aa21.92■■□□□ 1.1
RAPGEF1-206ENST00000438647 SLC9A8Q9Y2E8 581 aa21.92■■□□□ 1.1
RAPGEF1-206ENST00000438647 HRNRQ86YZ3 2850 aaPredicted RBP21.92■■□□□ 1.1
RAPGEF1-206ENST00000438647 FREM1Q5H8C1 2179 aa21.91■■□□□ 1.1
RAPGEF1-206ENST00000438647 LOC100653049A0A140TA62 436 aa21.91■■□□□ 1.1
RAPGEF1-206ENST00000438647 NPIPB7O75200 414 aa21.91■■□□□ 1.1
RAPGEF1-206ENST00000438647 MRPL33O75394 65 aaKnown RBP21.91■■□□□ 1.1
RAPGEF1-206ENST00000438647 KRT34O76011 436 aa21.91■■□□□ 1.1
RAPGEF1-206ENST00000438647 AHSA1O95433 338 aa21.91■■□□□ 1.1
RAPGEF1-206ENST00000438647 PNMTP11086 282 aa21.91■■□□□ 1.1
RAPGEF1-206ENST00000438647 PCGF2P35227 344 aa21.91■■□□□ 1.1
RAPGEF1-206ENST00000438647 DMTNQ08495 405 aa21.91■■□□□ 1.1
RAPGEF1-206ENST00000438647 BEX5Q5H9J7 111 aa21.91■■□□□ 1.1
RAPGEF1-206ENST00000438647 FAM91A1Q658Y4 838 aa21.91■■□□□ 1.1
RAPGEF1-206ENST00000438647 C5orf46Q6UWT4 87 aa21.91■■□□□ 1.1
RAPGEF1-206ENST00000438647 PAMR1Q6UXH9 720 aa21.91■■□□□ 1.1
RAPGEF1-206ENST00000438647 RANBP3LQ86VV4 465 aaPredicted RBP21.91■■□□□ 1.1
RAPGEF1-206ENST00000438647 PIK3IP1Q96FE7 263 aa21.91■■□□□ 1.1
RAPGEF1-206ENST00000438647 ECSITQ9BQ95 431 aa21.91■■□□□ 1.1
RAPGEF1-206ENST00000438647 TMEM27Q9HBJ8 222 aa21.91■■□□□ 1.1
RAPGEF1-206ENST00000438647 PARPBPQ9NWS1 579 aa21.91■■□□□ 1.1
RAPGEF1-206ENST00000438647 PRSS50Q9UI38 385 aa21.91■■□□□ 1.1
RAPGEF1-206ENST00000438647 A0A1B0GWA3 101 aa21.9■■□□□ 1.1
RAPGEF1-206ENST00000438647 M0QX08 132 aa21.9■■□□□ 1.1
RAPGEF1-206ENST00000438647 FXYD1O00168 92 aa21.9■■□□□ 1.1
RAPGEF1-206ENST00000438647 CCDC22O60826 627 aa21.9■■□□□ 1.1
RAPGEF1-206ENST00000438647 RAMP1O60894 148 aa21.9■■□□□ 1.1
RAPGEF1-206ENST00000438647 THBDP07204 575 aa21.9■■□□□ 1.1
RAPGEF1-206ENST00000438647 C8BP07358 591 aa21.9■■□□□ 1.1
RAPGEF1-206ENST00000438647 HTR2AP28223 471 aa21.9■■□□□ 1.1
RAPGEF1-206ENST00000438647 SLC17A1Q14916 467 aa21.9■■□□□ 1.1
RAPGEF1-206ENST00000438647 VMACQ2NL98 169 aa21.9■■□□□ 1.1
RAPGEF1-206ENST00000438647 ALG10BQ5I7T1 473 aa21.9■■□□□ 1.1
RAPGEF1-206ENST00000438647 ULK3Q6PHR2 472 aa21.9■■□□□ 1.1
RAPGEF1-206ENST00000438647 C22orf34Q6ZV56 151 aa21.9■■□□□ 1.1
RAPGEF1-206ENST00000438647 COMTD1Q86VU5 262 aa21.9■■□□□ 1.1
RAPGEF1-206ENST00000438647 SMYD1Q8NB12 490 aa21.9■■□□□ 1.1
RAPGEF1-206ENST00000438647 RASSF5Q8WWW0 418 aa21.9■■□□□ 1.1
RAPGEF1-206ENST00000438647 S100PBPQ96BU1 408 aa21.9■■□□□ 1.1
RAPGEF1-206ENST00000438647 SF3B5Q9BWJ5 86 aaKnown RBP21.9■■□□□ 1.1
RAPGEF1-206ENST00000438647 LIME1Q9H400 295 aa21.9■■□□□ 1.1
RAPGEF1-206ENST00000438647 ADPRHL2Q9NX46 363 aa21.9■■□□□ 1.1
RAPGEF1-206ENST00000438647 AQP7P3A6NL99 342 aa21.89■■□□□ 1.09
RAPGEF1-206ENST00000438647 SIAH2O43255 324 aa21.89■■□□□ 1.09
RAPGEF1-206ENST00000438647 AKR7A3O95154 331 aa21.89■■□□□ 1.09
RAPGEF1-206ENST00000438647 VAMP5O95183 116 aa21.89■■□□□ 1.09
RAPGEF1-206ENST00000438647 RAF1P04049 648 aa21.89■■□□□ 1.09
RAPGEF1-206ENST00000438647 IST1P53990 364 aa21.89■■□□□ 1.09
RAPGEF1-206ENST00000438647 NR1H2P55055 460 aa21.89■■□□□ 1.09
RAPGEF1-206ENST00000438647 FBXW9Q5XUX1 488 aa21.89■■□□□ 1.09
RAPGEF1-206ENST00000438647 BHLHA15Q7RTS1 189 aaPredicted RBP21.89■■□□□ 1.09
RAPGEF1-206ENST00000438647 UBE2J2Q8N2K1 259 aa21.89■■□□□ 1.09
RAPGEF1-206ENST00000438647 TMEM99Q8N816 258 aa21.89■■□□□ 1.09
RAPGEF1-206ENST00000438647 MFSD8Q8NHS3 518 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms