RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.48□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 C1QTNF12Q5T7M4 302 aa10.48□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 KRT80Q6KB66 452 aa10.48□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 C3orf33Q6P1S2 294 aa10.48□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 LYPD4Q6UWN0 246 aa10.48□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 LRIG3Q6UXM1 1119 aa10.48□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 WDFY1Q8IWB7 410 aa10.48□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 CENPLQ8N0S6 344 aaPredicted RBP10.48□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 SLC35F6Q8N357 371 aa10.48□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 MMGT1Q8N4V1 131 aa10.48□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 DEFB108BQ8NET1 73 aa10.48□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 GATA5Q9BWX5 397 aaPredicted RBP10.48□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 BRF2Q9HAW0 419 aa10.48□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 OXSMQ9NWU1 459 aa10.48□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 VPS29Q9UBQ0 182 aa10.48□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 FLVCR1Q9Y5Y0 555 aa10.48□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 DYNC2H1Q8NCM8 4307 aaKnown RBP10.48□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 MDFIC2A0A1B0GVS7 189 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 CLPSL1A2RUU4 121 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 MEGF11A6BM72 1044 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 ETV2O00321 342 aaPredicted RBP10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 RGS13O14921 159 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 SHOX2O60902 331 aaPredicted RBP10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 PRPS2P11908 318 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 TSPAN8P19075 237 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 GATA3P23771 443 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 TIA1P31483 386 aaKnown RBP eCLIP10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 POU3F1Q03052 451 aaPredicted RBP10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 C2orf80Q0P641 193 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 SNTB2Q13425 540 aaKnown RBP10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 HLXQ14774 488 aaPredicted RBP10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 KLHL26Q53HC5 615 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 SYT14P1Q58G82 188 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 LETMD1Q6P1Q0 360 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 ZNF551Q7Z340 670 aaPredicted RBP10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 LRP11Q86VZ4 500 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 PTGR2Q8N8N7 351 aaPredicted RBP10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 NOA1Q8NC60 698 aaKnown RBP10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 OR1K1Q8NGR3 316 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 OR6Y1Q8NGX8 325 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 OR4F5Q8NH21 305 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 CDC26Q8NHZ8 85 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 RHEBL1Q8TAI7 183 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 PIGXQ8TBF5 258 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 BCL2L2Q92843 193 aaPredicted RBP10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 RAB39BQ96DA2 213 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 LRRC39Q96DD0 335 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 KTI12Q96EK9 354 aaPredicted RBP10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 GIMAP5Q96F15 307 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 C16orf58Q96GQ5 468 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 APIPQ96GX9 242 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 BOD1Q96IK1 185 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 ARL5BQ96KC2 179 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 SYT3Q9BQG1 590 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 ZNF416Q9BWM5 594 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 OBP2BQ9NPH6 170 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 MMP26Q9NRE1 261 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 TNFRSF19Q9NS68 423 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 C1RLQ9NZP8 487 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 MYEF2Q9P2K5 600 aaKnown RBP10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 PCTPQ9UKL6 214 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 CMAHPQ9Y471 501 aa10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 TNPO3Q9Y5L0 923 aaKnown RBP10.47□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 DNAH9Q9NYC9 4486 aa10.46□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 IGHV3OR16-10A0A075B7F0 116 aa10.46□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 TTC36A6NLP5 189 aa10.46□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 GTPBP1O00178 669 aaKnown RBP10.46□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 UBOX5O94941 541 aa10.46□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 SLITRK5O94991 958 aa10.46□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 NGFP01138 241 aa10.46□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 GSNP06396 782 aa10.46□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 TFPIP10646 304 aa10.46□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 NAT2P11245 290 aa10.46□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 DDCP20711 480 aa10.46□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 MAGEB1P43366 347 aa10.46□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 SUMO3P55854 103 aaPredicted RBP10.46□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 UBE2NP61088 152 aaKnown RBP10.46□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 PDIA2Q13087 525 aaKnown RBP10.46□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 DAG1Q14118 895 aa10.46□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 GGTA1PQ4G0N0 100 aa10.46□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 ATP6AP1LQ52LC2 224 aa10.46□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 MTERF4Q7Z6M4 381 aaKnown RBP10.46□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 POP5Q969H6 163 aaKnown RBP10.46□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 PHF21BQ96EK2 531 aa10.46□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 AURKBQ96GD4 344 aaPredicted RBP10.46□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 NELFAQ9H3P2 528 aa10.46□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 MS4A5Q9H3V2 200 aa10.46□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 KLHL21Q9UJP4 597 aa10.46□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 ZNF225Q9UK10 706 aa10.46□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 ARPC4-TTLL3A0A0A6YYG9 625 aa10.45□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 ZNF503-AS2A6NEH8 195 aa10.45□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 HOXA3O43365 443 aaPredicted RBP10.45□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 SEC14L2O76054 403 aa10.45□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 IGKV3-15P01624 115 aa10.45□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 SSTR1P30872 391 aa10.45□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 MAGEA8P43361 318 aa10.45□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 FNTAP49354 379 aa10.45□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 CCR4P51679 360 aa10.45□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 GNG11P61952 73 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms