RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 POT1Q9NUX5 634 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 WSB2Q9NYS7 404 aaPredicted RBP10.84□□□□□ -0.67
CD44-209ENST00000433892 HCN3Q9P1Z3 774 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 ZNF222Q9UK12 451 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 COPS3Q9UNS2 423 aa10.84□□□□□ -0.67
CD44-209ENST00000433892 A0A0A6YYC8 382 aaPredicted RBP10.83□□□□□ -0.68
CD44-209ENST00000433892 TEX13CA0A0J9YWL9 993 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 I3L1I5 382 aaPredicted RBP10.83□□□□□ -0.68
CD44-209ENST00000433892 PSMD9O00233 223 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 SELENOFO60613 162 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 ARL6IP5O75915 188 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 EDNRAP25101 427 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 STOMP27105 288 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 CAPZA2P47755 286 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 MMP15P51511 669 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 ACTA2P62736 377 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 ACTG2P63267 376 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 UBE2IP63279 158 aaKnown RBP10.83□□□□□ -0.68
CD44-209ENST00000433892 STX4Q12846 297 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 ERV3-1Q14264 604 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 PON3Q15166 354 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 TMEM92Q6UXU6 159 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 NPSR1Q6W5P4 371 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 CREB3L2Q70SY1 520 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 TIGD4Q8IY51 512 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 C9orf62Q8N4C0 152 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 OR6K6Q8NGW6 343 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 SGTBQ96EQ0 304 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 RBM18Q96H35 190 aaKnown RBP10.83□□□□□ -0.68
CD44-209ENST00000433892 DERL3Q96Q80 235 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 CITED4Q96RK1 184 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 GAS2L1Q99501 681 aaPredicted RBP10.83□□□□□ -0.68
CD44-209ENST00000433892 CACNG6Q9BXT2 260 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 LMAN2LQ9H0V9 348 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 MKKSQ9NPJ1 570 aaPredicted RBP10.83□□□□□ -0.68
CD44-209ENST00000433892 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.83□□□□□ -0.68
CD44-209ENST00000433892 WBP1LQ9NX94 342 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 ABRACLQ9P1F3 81 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 LRIT1Q9P2V4 623 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 SLC23A1Q9UHI7 598 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 ICAM5Q9UMF0 924 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 C7orf66A4D0T2 115 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 OR6C68A6NDL8 312 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 FAM171A2A8MVW0 826 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 IDSB3KWA1 339 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 MT-ND4P03905 459 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 SYPP08247 313 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 UCHL1P09936 223 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 ANKRD34CP0C6C1 535 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 CXCL3P19876 107 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 GRPRP30550 384 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 AKT2P31751 481 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 FGFBP1Q14512 234 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 CDONQ4KMG0 1287 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 HACD4Q5VWC8 232 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 SYS1Q8N2H4 156 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 POMGNT2Q8NAT1 580 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 NPEPL1Q8NDH3 523 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 OR7G1Q8NGA0 311 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 OR4C3Q8NH37 302 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 ZNF671Q8TAW3 534 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 HAVCR2Q8TDQ0 301 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 RASD2Q96D21 266 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 HSPA12BQ96MM6 686 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 TEKT2Q9UIF3 430 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 NUBP2Q9Y5Y2 271 aa10.83□□□□□ -0.68
CD44-209ENST00000433892 PRKNO60260 465 aaPredicted RBP10.82□□□□□ -0.68
CD44-209ENST00000433892 CSTAP01040 98 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 TNFP01375 233 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 ADRB1P08588 477 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 MAGEB1P43366 347 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 PGDP52209 483 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 YPEL5P62699 121 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 ERVK-25P63136 954 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 PITPNAQ00169 270 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 MAT1AQ00266 395 aaKnown RBP10.82□□□□□ -0.68
CD44-209ENST00000433892 HYAL1Q12794 435 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 C1orf61Q13536 156 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 GGTLC2Q14390 218 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 GAS6Q14393 721 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 ZNF267Q14586 743 aaPredicted RBP10.82□□□□□ -0.68
CD44-209ENST00000433892 HSD17B12Q53GQ0 312 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 RPL22L1Q6P5R6 122 aaKnown RBP10.82□□□□□ -0.68
CD44-209ENST00000433892 ZNF550Q7Z398 422 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 TAF8Q7Z7C8 310 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 OOSP2Q86WS3 158 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 BEST4Q8NFU0 473 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 OR51Q1Q8NH59 317 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 OR14A16Q8NHC5 309 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 LGALS14Q8TCE9 139 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 GPBAR1Q8TDU6 330 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 CDCA3Q99618 268 aaPredicted RBP10.82□□□□□ -0.68
CD44-209ENST00000433892 OR51J1Q9H342 316 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 ZCCHC4Q9H5U6 513 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 AUNIPQ9H7T9 357 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 NOX4Q9NPH5 578 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 SLCO1C1Q9NYB5 712 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 STMN3Q9NZ72 180 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 NCDNQ9UBB6 729 aa10.82□□□□□ -0.68
CD44-209ENST00000433892 A0A1B0GVT2 93 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms