RNA–Protein interactions for RNA: ENST00000432213.1

SEC13-212, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-212ENST00000432213 NELFAQ9H3P2 528 aa12.4□□□□□ -0.42
SEC13-212ENST00000432213 MARCOQ9UEW3 520 aaPredicted RBP12.4□□□□□ -0.42
SEC13-212ENST00000432213 IGHV1-18A0A0C4DH31 117 aa12.39□□□□□ -0.43
SEC13-212ENST00000432213 IGHV4-61A0A0C4DH41 118 aa12.39□□□□□ -0.43
SEC13-212ENST00000432213 NR5A2O00482 541 aa12.39□□□□□ -0.43
SEC13-212ENST00000432213 BGNP21810 368 aa12.39□□□□□ -0.43
SEC13-212ENST00000432213 MAGEA8P43361 318 aa12.39□□□□□ -0.43
SEC13-212ENST00000432213 MVDP53602 400 aa12.39□□□□□ -0.43
SEC13-212ENST00000432213 EPS8Q12929 822 aa12.39□□□□□ -0.43
SEC13-212ENST00000432213 CEACAM7Q14002 265 aa12.39□□□□□ -0.43
SEC13-212ENST00000432213 RAB35Q15286 201 aa12.39□□□□□ -0.43
SEC13-212ENST00000432213 SWI5Q1ZZU3 235 aa12.39□□□□□ -0.43
SEC13-212ENST00000432213 GTDC1Q4AE62 458 aa12.39□□□□□ -0.43
SEC13-212ENST00000432213 MRPL2Q5T653 305 aaKnown RBP12.39□□□□□ -0.43
SEC13-212ENST00000432213 ATAD3BQ5T9A4 648 aa12.39□□□□□ -0.43
SEC13-212ENST00000432213 KLHL17Q6TDP4 642 aa12.39□□□□□ -0.43
SEC13-212ENST00000432213 ZNF836Q6ZNA1 936 aa12.39□□□□□ -0.43
SEC13-212ENST00000432213 VRK2Q86Y07 508 aa12.39□□□□□ -0.43
SEC13-212ENST00000432213 NUDCD3Q8IVD9 361 aa12.39□□□□□ -0.43
SEC13-212ENST00000432213 ZHX1-C8orf76Q96EF9 292 aa12.39□□□□□ -0.43
SEC13-212ENST00000432213 RADILQ96JH8 1075 aa12.39□□□□□ -0.43
SEC13-212ENST00000432213 CCDC115Q96NT0 180 aa12.39□□□□□ -0.43
SEC13-212ENST00000432213 KCNK17Q96T54 332 aa12.39□□□□□ -0.43
SEC13-212ENST00000432213 POLE3Q9NRF9 147 aa12.39□□□□□ -0.43
SEC13-212ENST00000432213 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.39□□□□□ -0.43
SEC13-212ENST00000432213 MGAT4BQ9UQ53 548 aa12.39□□□□□ -0.43
SEC13-212ENST00000432213 ZNF503-AS2A6NEH8 195 aa12.38□□□□□ -0.43
SEC13-212ENST00000432213 LIPT2A6NK58 231 aa12.38□□□□□ -0.43
SEC13-212ENST00000432213 E9PBE3 544 aa12.38□□□□□ -0.43
SEC13-212ENST00000432213 SDHDO14521 159 aa12.38□□□□□ -0.43
SEC13-212ENST00000432213 GPR171O14626 319 aa12.38□□□□□ -0.43
SEC13-212ENST00000432213 DNPH1O43598 174 aa12.38□□□□□ -0.43
SEC13-212ENST00000432213 LGI1O95970 557 aa12.38□□□□□ -0.43
SEC13-212ENST00000432213 SERPINE1P05121 402 aa12.38□□□□□ -0.43
SEC13-212ENST00000432213 CELA3BP08861 270 aa12.38□□□□□ -0.43
SEC13-212ENST00000432213 CALCRP30988 508 aa12.38□□□□□ -0.43
SEC13-212ENST00000432213 CHI3L1P36222 383 aaPredicted RBP12.38□□□□□ -0.43
SEC13-212ENST00000432213 ACAA2P42765 397 aaKnown RBP12.38□□□□□ -0.43
SEC13-212ENST00000432213 SELENOPP49908 381 aa12.38□□□□□ -0.43
SEC13-212ENST00000432213 POLR2HP52434 150 aaKnown RBP12.38□□□□□ -0.43
SEC13-212ENST00000432213 EFNA4P52798 201 aa12.38□□□□□ -0.43
SEC13-212ENST00000432213 MAD2L1Q13257 205 aaPredicted RBP12.38□□□□□ -0.43
SEC13-212ENST00000432213 OR7A5Q15622 319 aa12.38□□□□□ -0.43
SEC13-212ENST00000432213 SMU1Q2TAY7 513 aa12.38□□□□□ -0.43
SEC13-212ENST00000432213 RPS26P11Q5JNZ5 115 aaPredicted RBP12.38□□□□□ -0.43
SEC13-212ENST00000432213 OTUD3Q5T2D3 398 aaPredicted RBP12.38□□□□□ -0.43
SEC13-212ENST00000432213 ZNF544Q6NX49 715 aa12.38□□□□□ -0.43
SEC13-212ENST00000432213 OR9K2Q8NGE7 335 aa12.38□□□□□ -0.43
SEC13-212ENST00000432213 TMEM45BQ96B21 275 aa12.38□□□□□ -0.43
SEC13-212ENST00000432213 FBXO17Q96EF6 278 aa12.38□□□□□ -0.43
SEC13-212ENST00000432213 ALKBH3Q96Q83 286 aaPredicted RBP12.38□□□□□ -0.43
SEC13-212ENST00000432213 ADAM19Q9H013 955 aa12.38□□□□□ -0.43
SEC13-212ENST00000432213 CHODLQ9H9P2 273 aa12.38□□□□□ -0.43
SEC13-212ENST00000432213 SEC14L4Q9UDX3 406 aa12.38□□□□□ -0.43
SEC13-212ENST00000432213 DCTN4Q9UJW0 460 aa12.38□□□□□ -0.43
SEC13-212ENST00000432213 TRAPPC4Q9Y296 219 aa12.38□□□□□ -0.43
SEC13-212ENST00000432213 SLC9A8Q9Y2E8 581 aa12.38□□□□□ -0.43
SEC13-212ENST00000432213 SPIN1Q9Y657 262 aaPredicted RBP12.38□□□□□ -0.43
SEC13-212ENST00000432213 CCDC154A6NI56 674 aa12.37□□□□□ -0.43
SEC13-212ENST00000432213 ZNF208O43345 1280 aa12.37□□□□□ -0.43
SEC13-212ENST00000432213 UPK3AO75631 287 aa12.37□□□□□ -0.43
SEC13-212ENST00000432213 IGFBP1P08833 259 aaPredicted RBP12.37□□□□□ -0.43
SEC13-212ENST00000432213 SLC25A16P16260 332 aa12.37□□□□□ -0.43
SEC13-212ENST00000432213 MPGP29372 298 aa12.37□□□□□ -0.43
SEC13-212ENST00000432213 IL2RGP31785 369 aa12.37□□□□□ -0.43
SEC13-212ENST00000432213 SLC1A6P48664 564 aa12.37□□□□□ -0.43
SEC13-212ENST00000432213 SLC35A1P78382 337 aa12.37□□□□□ -0.43
SEC13-212ENST00000432213 IFFO1Q0D2I5 559 aa12.37□□□□□ -0.43
SEC13-212ENST00000432213 GGTLC2Q14390 218 aa12.37□□□□□ -0.43
SEC13-212ENST00000432213 OR7E24Q6IFN5 339 aa12.37□□□□□ -0.43
SEC13-212ENST00000432213 PAQR6Q6TCH4 344 aa12.37□□□□□ -0.43
SEC13-212ENST00000432213 WDFY1Q8IWB7 410 aa12.37□□□□□ -0.43
SEC13-212ENST00000432213 CLIP4Q8N3C7 705 aa12.37□□□□□ -0.43
SEC13-212ENST00000432213 C1orf162Q8NEQ5 155 aaPredicted RBP12.37□□□□□ -0.43
SEC13-212ENST00000432213 WDR60Q8WVS4 1066 aa12.37□□□□□ -0.43
SEC13-212ENST00000432213 TMEM158Q8WZ71 300 aa12.37□□□□□ -0.43
SEC13-212ENST00000432213 ARL8AQ96BM9 186 aa12.37□□□□□ -0.43
SEC13-212ENST00000432213 C3orf49Q96BT1 292 aa12.37□□□□□ -0.43
SEC13-212ENST00000432213 MSI2Q96DH6 328 aaKnown RBP12.37□□□□□ -0.43
SEC13-212ENST00000432213 AURKBQ96GD4 344 aaPredicted RBP12.37□□□□□ -0.43
SEC13-212ENST00000432213 TRNT1Q96Q11 434 aaKnown RBP12.37□□□□□ -0.43
SEC13-212ENST00000432213 AIG1Q9NVV5 245 aa12.37□□□□□ -0.43
SEC13-212ENST00000432213 UPB1Q9UBR1 384 aa12.37□□□□□ -0.43
SEC13-212ENST00000432213 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.37□□□□□ -0.43
SEC13-212ENST00000432213 BTNL2Q9UIR0 455 aa12.37□□□□□ -0.43
SEC13-212ENST00000432213 HAO1Q9UJM8 370 aa12.37□□□□□ -0.43
SEC13-212ENST00000432213 CDC42EP3Q9UKI2 254 aa12.37□□□□□ -0.43
SEC13-212ENST00000432213 PCDHGB4Q9UN71 923 aa12.37□□□□□ -0.43
SEC13-212ENST00000432213 RAP2CQ9Y3L5 183 aa12.37□□□□□ -0.43
SEC13-212ENST00000432213 V9GYY5 206 aaPredicted RBP12.37□□□□□ -0.43
SEC13-212ENST00000432213 DSPPQ9NZW4 1301 aa12.37□□□□□ -0.43
SEC13-212ENST00000432213 ANK2Q01484 3957 aa12.36□□□□□ -0.43
SEC13-212ENST00000432213 AQP7P3A6NL99 342 aa12.36□□□□□ -0.43
SEC13-212ENST00000432213 FRS3O43559 492 aa12.36□□□□□ -0.43
SEC13-212ENST00000432213 F12P00748 615 aaPredicted RBP12.36□□□□□ -0.43
SEC13-212ENST00000432213 IFNA2P01563 188 aa12.36□□□□□ -0.43
SEC13-212ENST00000432213 LBPP18428 481 aa12.36□□□□□ -0.43
SEC13-212ENST00000432213 USF1P22415 310 aaPredicted RBP12.36□□□□□ -0.43
SEC13-212ENST00000432213 APOBEC3AP31941 199 aaPredicted RBP12.36□□□□□ -0.43
SEC13-212ENST00000432213 SLC1A3P43003 542 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms