RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 CALB2P22676 271 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 EPHX2P34913 555 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 RPL29P47914 159 aaKnown RBP2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 FNTAP49354 379 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 CEBPDP49716 269 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 DUSP3P51452 185 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 PRKXP51817 358 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 RPL23AP62750 156 aaKnown RBP2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 OTUD4Q01804 1114 aaKnown RBP2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 KLRC3Q07444 240 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 EGFEM1PQ0D2K5 195 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 ASAH1Q13510 395 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 DDX39BQ13838 428 aaKnown RBP2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 RABL6Q3YEC7 729 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 ATAD3CQ5T2N8 411 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 LIPNQ5VXI9 398 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 OR4F3Q6IEY1 312 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 ZSCAN25Q6NSZ9 544 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 Q6ZR54 194 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 EFL1Q7Z2Z2 1120 aaKnown RBP2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 TPRA1Q86W33 373 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 SKA3Q8IX90 412 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 MFSD9Q8NBP5 474 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 OR13F1Q8NGS4 319 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 N4BP2L2Q92802 583 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 RNF126Q9BV68 326 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 GON7Q9BXV9 100 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 CHIAQ9BZP6 476 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 NAT10Q9H0A0 1025 aaKnown RBP2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 SMYD3Q9H7B4 428 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 ZNF702PQ9H963 129 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 ONECUT1Q9UBC0 465 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 ADAM28Q9UKQ2 775 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 RRP15Q9Y3B9 282 aaKnown RBP2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 NAALAD2Q9Y3Q0 740 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 TTC21AQ8NDW8 1320 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 NRAPQ86VF7 1730 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 PPIP5K1Q6PFW1 1433 aa2.33□□□□□ -2.04
HMGB1P27-201ENST00000431429 CLTCL1P53675 1640 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 IGLV8-61A0A075B6I0 122 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 IGHV1OR15-1A0A075B7D0 117 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 XKRY2A2RUG3 117 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 ZNF208O43345 1280 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 RAMP3O60896 148 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 TSPAN12O95859 305 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 IGHV3-23P01764 117 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 THY1P04216 161 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 P0C879 139 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 IMPDH1P20839 514 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 ADORA2BP29275 332 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 TDO2P48775 406 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 DSCR10P59022 87 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 CD47Q08722 323 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 CFAP221Q4G0U5 840 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 OR2B11Q5JQS5 317 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 OR5M10Q6IEU7 315 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 PMF1Q6P1K2 205 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 ZYG11AQ6WRX3 759 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 CCDC80Q76M96 950 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 TRIM69Q86WT6 500 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 SLC39A11Q8N1S5 342 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 PAQR8Q8TEZ7 354 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 SCFD1Q8WVM8 642 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 FAF2Q96CS3 445 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 NOL4LQ96MY1 436 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 KCNA7Q96RP8 456 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 TBX15Q96SF7 602 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 KIR2DL4Q99706 377 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 TSSK1BQ9BXA7 367 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 SRXN1Q9BYN0 137 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 CRNKL1Q9BZJ0 848 aaKnown RBP2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 UBXN6Q9BZV1 441 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 NXF5Q9H1B4 397 aaKnown RBP2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 ZNF385DQ9H6B1 395 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 MCCC2Q9HCC0 563 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 HYPKQ9NX55 129 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 DCAF16Q9NXF7 216 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 OR1A1Q9P1Q5 309 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 WARS2Q9UGM6 360 aaKnown RBP2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 APOBEC3BQ9UH17 382 aaKnown RBP2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 ZNF639Q9UID6 485 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 ZNF107Q9UII5 783 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 CDH9Q9ULB4 789 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 RABL2BQ9UNT1 228 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 PDE10AQ9Y233 779 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 MAD1L1Q9Y6D9 718 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 PIK3C2GO75747 1445 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 SPATA31E1Q6ZUB1 1445 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 VPS8Q8N3P4 1428 aa2.32□□□□□ -2.04
HMGB1P27-201ENST00000431429 PHRF1Q9P1Y6 1649 aaKnown RBP2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 PARP4Q9UKK3 1724 aaKnown RBP2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 FAM240BA0A1B0GVZ2 78 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 FAM168BA1KXE4 195 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 OR52A4PA6NMU1 304 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 UBXN8O00124 270 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 AP3B1O00203 1094 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 SULT2B1O00204 365 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 MPHOSPH10O00566 681 aaKnown RBP2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 SCGNO76038 276 aa2.31□□□□□ -2.04
HMGB1P27-201ENST00000431429 GNA14O95837 355 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms