RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 TP53P04637 393 aaPredicted RBP14.34□□□□□ -0.11
PTPRF-206ENST00000429895 SLC41A2Q96JW4 573 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 AMDHD1Q96NU7 426 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 SGPP1Q9BX95 441 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 NOX3Q9HBY0 568 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 CNOT11Q9UKZ1 510 aaKnown RBP14.34□□□□□ -0.11
PTPRF-206ENST00000429895 PKLRP30613 574 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 CARD18P57730 90 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 SLC10A1Q14973 349 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 SLC6A19Q695T7 634 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 PRICKLE2Q7Z3G6 844 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 SLC25A31Q9H0C2 315 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 LHX3Q9UBR4 397 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 TOR1AO14656 332 aa14.33□□□□□ -0.11
PTPRF-206ENST00000429895 SEC14L2O76054 403 aa14.33□□□□□ -0.11
PTPRF-206ENST00000429895 CLEC3BP05452 202 aa14.33□□□□□ -0.11
PTPRF-206ENST00000429895 OR8G3PP0DMU2 310 aa14.33□□□□□ -0.11
PTPRF-206ENST00000429895 GIFP27352 417 aa14.33□□□□□ -0.11
PTPRF-206ENST00000429895 ELF4Q99607 663 aaPredicted RBP14.33□□□□□ -0.11
PTPRF-206ENST00000429895 MYH2Q9UKX2 1941 aa14.33□□□□□ -0.11
PTPRF-206ENST00000429895 METTL15A6NJ78 407 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 DDAH2O95865 285 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 MYOGP15173 224 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 GM2AP17900 193 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 DCAF7P61962 342 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 TNFRSF17Q02223 184 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 FAM111BQ6SJ93 734 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 ZNF595Q8IYB9 648 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 RBMXL3Q8N7X1 1067 aaKnown RBP14.33□□□□□ -0.12
PTPRF-206ENST00000429895 STT3BQ8TCJ2 826 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 BSCL2Q96G97 398 aaPredicted RBP14.33□□□□□ -0.12
PTPRF-206ENST00000429895 OR51J1Q9H342 316 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 ZNF576Q9H609 170 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 RPA2P15927 270 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 EDDM3BP56851 147 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 RPL11P62913 178 aaKnown RBP14.33□□□□□ -0.12
PTPRF-206ENST00000429895 MPEG1Q2M385 716 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 DESI1Q6ICB0 168 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 BEST4Q8NFU0 473 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 ABHD11Q8NFV4 315 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 NAP1L6A6NFF2 107 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 OMGP23515 440 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 HBA1P69905 142 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 MSMO1Q15800 293 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 LEXMQ3ZCV2 418 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 NPSR1Q6W5P4 371 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 SLC6A18Q96N87 628 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 SLC29A1Q99808 456 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 PRSS16Q9NQE7 514 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 MBLAC1A4D2B0 266 aaPredicted RBP14.33□□□□□ -0.12
PTPRF-206ENST00000429895 TPT1P13693 172 aaKnown RBP14.33□□□□□ -0.12
PTPRF-206ENST00000429895 AFF3P51826 1226 aaKnown RBP14.33□□□□□ -0.12
PTPRF-206ENST00000429895 HABP2Q14520 560 aaPredicted RBP14.33□□□□□ -0.12
PTPRF-206ENST00000429895 FAM69AQ5T7M9 428 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 SHEQ5VZ18 495 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 METAP1DQ6UB28 335 aaPredicted RBP14.33□□□□□ -0.12
PTPRF-206ENST00000429895 RFLNAQ6ZTI6 216 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 FNDC8Q8TC99 324 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 ASB11Q8WXH4 323 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 ZNF419Q96HQ0 510 aaPredicted RBP14.33□□□□□ -0.12
PTPRF-206ENST00000429895 OCSTAMPQ9BR26 566 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 SLC38A1Q9H2H9 487 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 BIN3Q9NQY0 253 aa14.33□□□□□ -0.12
PTPRF-206ENST00000429895 DPM1O60762 260 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 HLA-AP01891 365 aaKnown RBP14.32□□□□□ -0.12
PTPRF-206ENST00000429895 HOXC13P31276 330 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 AKR1C1Q04828 323 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 DMWDQ09019 674 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 ZNF169Q14929 603 aaPredicted RBP14.32□□□□□ -0.12
PTPRF-206ENST00000429895 POU4F3Q15319 338 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 BRICD5Q6PL45 260 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 GLB1L2Q8IW92 636 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 FBXO7Q9Y3I1 522 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 A0A1W2PS29 197 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 MCRIP1C9JLW8 97 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 TPOP07202 933 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 ENPP1P22413 925 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 BIDP55957 195 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 GSCP56915 257 aaPredicted RBP14.32□□□□□ -0.12
PTPRF-206ENST00000429895 PRDX1Q06830 199 aaKnown RBP14.32□□□□□ -0.12
PTPRF-206ENST00000429895 DUSP7Q16829 419 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 FCRLAQ7L513 359 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 OR5M1Q8NGP8 315 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 ASB17Q8WXJ9 295 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 KATNB1Q9BVA0 655 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 HRH4Q9H3N8 390 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 CD300AQ9UGN4 299 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 ZNF142P52746 1687 aaPredicted RBP14.32□□□□□ -0.12
PTPRF-206ENST00000429895 DNAJC25-GNG10A0A024R161 153 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 UPK1BO75841 260 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 PTTG1O95997 202 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 PENKP01210 267 aaPredicted RBP14.32□□□□□ -0.12
PTPRF-206ENST00000429895 OR1D5P58170 312 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 OR4M1Q8NGD0 313 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 OR4A16Q8NH70 328 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 HAVCR2Q8TDQ0 301 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 TRBV4-1A0A0J9YWV2 114 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 A0A1W2PQ09 198 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 H3BMQ9 156 aa14.32□□□□□ -0.12
PTPRF-206ENST00000429895 EDN1P05305 212 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms