RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 IGKV3D-15A0A087WSY6 115 aa18.3■□□□□ 0.52
HSPG2-205ENST00000427897 A0A1W2PPR1 153 aa18.3■□□□□ 0.52
HSPG2-205ENST00000427897 ZC3H12DA2A288 527 aaKnown RBP18.3■□□□□ 0.52
HSPG2-205ENST00000427897 GMNCA6NCL1 334 aa18.3■□□□□ 0.52
HSPG2-205ENST00000427897 PRORSD1PA6NEY8 169 aa18.3■□□□□ 0.52
HSPG2-205ENST00000427897 ELOA3DA6NLF2 546 aaPredicted RBP18.3■□□□□ 0.52
HSPG2-205ENST00000427897 KLF4O43474 513 aa18.3■□□□□ 0.52
HSPG2-205ENST00000427897 CNOT4O95628 575 aaKnown RBP18.3■□□□□ 0.52
HSPG2-205ENST00000427897 IGHV3-9P01782 118 aa18.3■□□□□ 0.52
HSPG2-205ENST00000427897 CD99P14209 185 aa18.3■□□□□ 0.52
HSPG2-205ENST00000427897 HOXB9P17482 250 aaPredicted RBP18.3■□□□□ 0.52
HSPG2-205ENST00000427897 GPX2P18283 190 aa18.3■□□□□ 0.52
HSPG2-205ENST00000427897 CD53P19397 219 aa18.3■□□□□ 0.52
HSPG2-205ENST00000427897 GTF2E2P29084 291 aaKnown RBP18.3■□□□□ 0.52
HSPG2-205ENST00000427897 PRKAR1BP31321 381 aa18.3■□□□□ 0.52
HSPG2-205ENST00000427897 CYP51A1Q16850 503 aa18.3■□□□□ 0.52
HSPG2-205ENST00000427897 ELOA3BQ3SY89 546 aa18.3■□□□□ 0.52
HSPG2-205ENST00000427897 FBXW9Q5XUX1 488 aa18.3■□□□□ 0.52
HSPG2-205ENST00000427897 CASP12Q6UXS9 341 aa18.3■□□□□ 0.52
HSPG2-205ENST00000427897 P3H2Q8IVL5 708 aa18.3■□□□□ 0.52
HSPG2-205ENST00000427897 ELOA3Q8NG57 546 aa18.3■□□□□ 0.52
HSPG2-205ENST00000427897 CCL19Q99731 98 aa18.3■□□□□ 0.52
HSPG2-205ENST00000427897 TMEM38AQ9H6F2 299 aa18.3■□□□□ 0.52
HSPG2-205ENST00000427897 SLC52A3Q9NQ40 469 aa18.3■□□□□ 0.52
HSPG2-205ENST00000427897 ADPRHL2Q9NX46 363 aa18.3■□□□□ 0.52
HSPG2-205ENST00000427897 ANGPT4Q9Y264 503 aa18.3■□□□□ 0.52
HSPG2-205ENST00000427897 ZNF716A6NP11 495 aa18.29■□□□□ 0.52
HSPG2-205ENST00000427897 FRS3O43559 492 aa18.29■□□□□ 0.52
HSPG2-205ENST00000427897 SMPD2O60906 423 aa18.29■□□□□ 0.52
HSPG2-205ENST00000427897 AHSA1O95433 338 aa18.29■□□□□ 0.52
HSPG2-205ENST00000427897 GGT1P19440 569 aa18.29■□□□□ 0.52
HSPG2-205ENST00000427897 AQP1P29972 269 aa18.29■□□□□ 0.52
HSPG2-205ENST00000427897 HOXC5Q00444 222 aa18.29■□□□□ 0.52
HSPG2-205ENST00000427897 SF3A3Q12874 501 aaKnown RBP eCLIP18.29■□□□□ 0.52
HSPG2-205ENST00000427897 MMEL1Q495T6 779 aa18.29■□□□□ 0.52
HSPG2-205ENST00000427897 RUNDC3AQ59EK9 446 aa18.29■□□□□ 0.52
HSPG2-205ENST00000427897 CGB2Q6NT52 195 aa18.29■□□□□ 0.52
HSPG2-205ENST00000427897 PAQR6Q6TCH4 344 aa18.29■□□□□ 0.52
HSPG2-205ENST00000427897 ZNF704Q6ZNC4 412 aaPredicted RBP18.29■□□□□ 0.52
HSPG2-205ENST00000427897 C20orf204Q6ZNR8 217 aa18.29■□□□□ 0.52
HSPG2-205ENST00000427897 CPLX4Q7Z7G2 160 aa18.29■□□□□ 0.52
HSPG2-205ENST00000427897 GPAT4Q86UL3 456 aa18.29■□□□□ 0.52
HSPG2-205ENST00000427897 HIPK4Q8NE63 616 aa18.29■□□□□ 0.52
HSPG2-205ENST00000427897 BHLHE22Q8NFJ8 381 aaPredicted RBP18.29■□□□□ 0.52
HSPG2-205ENST00000427897 TSPEARQ8WU66 669 aa18.29■□□□□ 0.52
HSPG2-205ENST00000427897 SLC35B4Q969S0 331 aa18.29■□□□□ 0.52
HSPG2-205ENST00000427897 ASB6Q9NWX5 421 aa18.29■□□□□ 0.52
HSPG2-205ENST00000427897 SLC9A8Q9Y2E8 581 aa18.29■□□□□ 0.52
HSPG2-205ENST00000427897 ARHGEF9O43307 516 aa18.28■□□□□ 0.52
HSPG2-205ENST00000427897 AKR7A3O95154 331 aa18.28■□□□□ 0.52
HSPG2-205ENST00000427897 ADSLP30566 484 aaPredicted RBP18.28■□□□□ 0.52
HSPG2-205ENST00000427897 SLC16A1P53985 500 aa18.28■□□□□ 0.52
HSPG2-205ENST00000427897 SEC24CP53992 1094 aa18.28■□□□□ 0.52
HSPG2-205ENST00000427897 FAPQ12884 760 aa18.28■□□□□ 0.52
HSPG2-205ENST00000427897 TAB1Q15750 504 aa18.28■□□□□ 0.52
HSPG2-205ENST00000427897 C1orf140Q5VVS0 124 aa18.28■□□□□ 0.52
HSPG2-205ENST00000427897 TGIF2LYQ8IUE0 185 aa18.28■□□□□ 0.52
HSPG2-205ENST00000427897 ARMC8Q8IUR7 673 aa18.28■□□□□ 0.52
HSPG2-205ENST00000427897 OR52E4Q8NGH9 312 aa18.28■□□□□ 0.52
HSPG2-205ENST00000427897 SLC25A36Q96CQ1 311 aa18.28■□□□□ 0.52
HSPG2-205ENST00000427897 TRBV5-3A0A0A0MS03 114 aa18.27■□□□□ 0.52
HSPG2-205ENST00000427897 LIPT2A6NK58 231 aa18.27■□□□□ 0.52
HSPG2-205ENST00000427897 CLOCKO15516 846 aa18.27■□□□□ 0.52
HSPG2-205ENST00000427897 KRT33AO76009 404 aa18.27■□□□□ 0.52
HSPG2-205ENST00000427897 CD3EP07766 207 aa18.27■□□□□ 0.52
HSPG2-205ENST00000427897 IGHV1-2P23083 117 aa18.27■□□□□ 0.52
HSPG2-205ENST00000427897 NKX6-1P78426 367 aaPredicted RBP18.27■□□□□ 0.52
HSPG2-205ENST00000427897 H3F3AP84243 136 aa18.27■□□□□ 0.52
HSPG2-205ENST00000427897 PPA1Q15181 289 aa18.27■□□□□ 0.52
HSPG2-205ENST00000427897 DLEU7Q6UYE1 221 aa18.27■□□□□ 0.52
HSPG2-205ENST00000427897 SSX8Q7RTT4 187 aa18.27■□□□□ 0.52
HSPG2-205ENST00000427897 SPATA21Q7Z572 469 aa18.27■□□□□ 0.52
HSPG2-205ENST00000427897 TMEM99Q8N816 258 aa18.27■□□□□ 0.52
HSPG2-205ENST00000427897 C11orf65Q8NCR3 313 aa18.27■□□□□ 0.52
HSPG2-205ENST00000427897 STK35Q8TDR2 534 aa18.27■□□□□ 0.52
HSPG2-205ENST00000427897 SLC26A7Q8TE54 656 aa18.27■□□□□ 0.52
HSPG2-205ENST00000427897 C3orf49Q96BT1 292 aa18.27■□□□□ 0.52
HSPG2-205ENST00000427897 ANKRD27Q96NW4 1050 aa18.27■□□□□ 0.52
HSPG2-205ENST00000427897 CGREF1Q99674 301 aa18.27■□□□□ 0.52
HSPG2-205ENST00000427897 CPPED1Q9BRF8 314 aaPredicted RBP18.27■□□□□ 0.52
HSPG2-205ENST00000427897 TRIM2Q9C040 744 aa18.27■□□□□ 0.52
HSPG2-205ENST00000427897 IKZF5Q9H5V7 419 aa18.27■□□□□ 0.52
HSPG2-205ENST00000427897 CHST2Q9Y4C5 530 aa18.27■□□□□ 0.52
HSPG2-205ENST00000427897 GMEB1Q9Y692 573 aa18.27■□□□□ 0.52
HSPG2-205ENST00000427897 RAMP1O60894 148 aa18.26■□□□□ 0.51
HSPG2-205ENST00000427897 RGS8P57771 180 aaPredicted RBP18.26■□□□□ 0.51
HSPG2-205ENST00000427897 MTPNP58546 118 aa18.26■□□□□ 0.51
HSPG2-205ENST00000427897 RBBP4Q09028 425 aa18.26■□□□□ 0.51
HSPG2-205ENST00000427897 CYLC2Q14093 348 aaPredicted RBP18.26■□□□□ 0.51
HSPG2-205ENST00000427897 TIMM23BQ5SRD1 257 aa18.26■□□□□ 0.51
HSPG2-205ENST00000427897 DHRS4L2Q6PKH6 230 aa18.26■□□□□ 0.51
HSPG2-205ENST00000427897 P2RY8Q86VZ1 359 aa18.26■□□□□ 0.51
HSPG2-205ENST00000427897 C10orf111Q8N326 155 aa18.26■□□□□ 0.51
HSPG2-205ENST00000427897 DPP10Q8N608 796 aa18.26■□□□□ 0.51
HSPG2-205ENST00000427897 SF3B5Q9BWJ5 86 aaKnown RBP18.26■□□□□ 0.51
HSPG2-205ENST00000427897 FAM107BQ9H098 131 aa18.26■□□□□ 0.51
HSPG2-205ENST00000427897 ZNF385DQ9H6B1 395 aa18.26■□□□□ 0.51
HSPG2-205ENST00000427897 TMEM27Q9HBJ8 222 aa18.26■□□□□ 0.51
HSPG2-205ENST00000427897 RNF115Q9Y4L5 304 aa18.26■□□□□ 0.51
HSPG2-205ENST00000427897 FLVCR1Q9Y5Y0 555 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms