RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 SYT14Q8NB59 555 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 GMCL1P1Q8NEA9 526 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 OR2AP1Q8NGE2 309 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 OR2T34Q8NGX1 318 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 LINC01006Q8NI28 216 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 FAM3CQ92520 227 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 DCUN1D4Q92564 292 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 MRPS31Q92665 395 aaKnown RBP1.74□□□□□ -2.13
PTPRC-208ENST00000427110 TRIM44Q96DX7 344 aaPredicted RBP1.74□□□□□ -2.13
PTPRC-208ENST00000427110 C7orf34Q96L11 122 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 AMDHD1Q96NU7 426 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 TXN2Q99757 166 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 GAL3ST1Q99999 423 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 EBF4Q9BQW3 602 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 SRXN1Q9BYN0 137 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 RHBGQ9H310 441 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 GLIPR2Q9H4G4 154 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 NARFLQ9H6Q4 476 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 ASB8Q9H765 288 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 RAB18Q9NP72 206 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 ABCB10Q9NRK6 738 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 MARCH5Q9NX47 278 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 TREM2Q9NZC2 230 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 TMEM9Q9P0T7 183 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 ONECUT1Q9UBC0 465 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 PCSK1NQ9UHG2 260 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 LCMT1Q9UIC8 334 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 ANGPTL2Q9UKU9 493 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 NPIPA1Q9UND3 350 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 COPS3Q9UNS2 423 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 MRPS7Q9Y2R9 242 aaKnown RBP1.74□□□□□ -2.13
PTPRC-208ENST00000427110 DDX49Q9Y6V7 483 aaKnown RBP1.74□□□□□ -2.13
PTPRC-208ENST00000427110 DLC1Q96QB1 1528 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 MON2Q7Z3U7 1717 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 RIMBP3CA6NJZ7 1639 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 RIMBP3BA6NNM3 1639 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 TSPOAP1O95153 1857 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 NSD2O96028 1365 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 RIMBP3Q9UFD9 1639 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 NINLQ9Y2I6 1382 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 CENPJQ9HC77 1338 aaPredicted RBP1.73□□□□□ -2.13
PTPRC-208ENST00000427110 TULP4Q9NRJ4 1543 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 A0A1B0GUS0 222 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 A0A1B0GWB2 263 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 LRP5LA4QPB2 252 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 METTL21EPA6NDL7 271 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 HELTA6NFD8 242 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 K7N7A8 449 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 BTN3A3O00478 584 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 POLR2DO15514 142 aaKnown RBP1.73□□□□□ -2.13
PTPRC-208ENST00000427110 RS1O15537 224 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 EMC8O43402 210 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 OR10H3O60404 316 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 MTX2O75431 263 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 MMP23AO75900 390 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 SCGNO76038 276 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 RBMY1CP0DJD4 496 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 CCDC130P13994 396 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 POLR2EP19388 210 aaKnown RBP1.73□□□□□ -2.13
PTPRC-208ENST00000427110 CYP2B6P20813 491 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 HNF1AP20823 631 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 FUT3P21217 361 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 ATP6V1B2P21281 511 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 HMGB2P26583 209 aaKnown RBP1.73□□□□□ -2.13
PTPRC-208ENST00000427110 LAP3P28838 519 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 AQP1P29972 269 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 PPT1P50897 306 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 DAP3P51398 398 aaKnown RBP1.73□□□□□ -2.13
PTPRC-208ENST00000427110 CAV2P51636 162 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 ARFRP1Q13795 201 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 HERPUD1Q15011 391 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 SLC25A52Q3SY17 297 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 CCDC152Q4G0S7 254 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 EOGTQ5NDL2 527 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 SPATA46Q5T0L3 261 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 FAM71F2Q6NXP2 309 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 PMF1Q6P1K2 205 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 WDR74Q6RFH5 385 aaPredicted RBP1.73□□□□□ -2.13
PTPRC-208ENST00000427110 C17orf82Q86X59 251 aaPredicted RBP1.73□□□□□ -2.13
PTPRC-208ENST00000427110 VRK2Q86Y07 508 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 ERI1Q8IV48 349 aaKnown RBP1.73□□□□□ -2.13
PTPRC-208ENST00000427110 ZNF683Q8IZ20 524 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 SLC34A3Q8N130 599 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 TMEM123Q8N131 208 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 ZNF540Q8NDQ6 660 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 OR4D9Q8NGE8 314 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 OR56B4Q8NH76 319 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 OR1F12Q8NHA8 337 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 PAQR8Q8TEZ7 354 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 RLN3Q8WXF3 142 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 PGLYRP4Q96LB8 373 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 IMMP1LQ96LU5 166 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 TECTBQ96PL2 329 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 SLC35A5Q9BS91 424 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 TUBGCP2Q9BSJ2 902 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 RNF126Q9BV68 326 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 POLR2J2Q9GZM3 115 aaKnown RBP1.73□□□□□ -2.13
PTPRC-208ENST00000427110 POLR1EQ9GZS1 481 aaKnown RBP1.73□□□□□ -2.13
PTPRC-208ENST00000427110 MAGT1Q9H0U3 335 aa1.73□□□□□ -2.13
PTPRC-208ENST00000427110 POLR2J3Q9H1A7 115 aaKnown RBP1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms