RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 TMEM99Q8N816 258 aa16.2■□□□□ 0.18
SMARCAL1-205ENST00000425815 ZIC4Q8N9L1 334 aa16.2■□□□□ 0.18
SMARCAL1-205ENST00000425815 TSPEARQ8WU66 669 aa16.2■□□□□ 0.18
SMARCAL1-205ENST00000425815 KISS1RQ969F8 398 aaPredicted RBP16.2■□□□□ 0.18
SMARCAL1-205ENST00000425815 SLC35B4Q969S0 331 aa16.2■□□□□ 0.18
SMARCAL1-205ENST00000425815 PLPPR2Q96GM1 343 aa16.2■□□□□ 0.18
SMARCAL1-205ENST00000425815 ANKRD27Q96NW4 1050 aa16.2■□□□□ 0.18
SMARCAL1-205ENST00000425815 CGREF1Q99674 301 aa16.2■□□□□ 0.18
SMARCAL1-205ENST00000425815 PRR14Q9BWN1 585 aa16.2■□□□□ 0.18
SMARCAL1-205ENST00000425815 TMEM120AQ9BXJ8 343 aa16.2■□□□□ 0.18
SMARCAL1-205ENST00000425815 ARMC7Q9H6L4 198 aa16.2■□□□□ 0.18
SMARCAL1-205ENST00000425815 EMC3Q9P0I2 261 aa16.2■□□□□ 0.18
SMARCAL1-205ENST00000425815 NOSIPQ9Y314 301 aaKnown RBP16.2■□□□□ 0.18
SMARCAL1-205ENST00000425815 A8MVM7 634 aa16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 EVPLLA8MZ36 301 aa16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 FBP2O00757 339 aa16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 AKR7A3O95154 331 aa16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 CNOT4O95628 575 aaKnown RBP16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 IGHV3-9P01782 118 aa16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 COX5AP20674 150 aa16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 IL32P24001 234 aa16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 HTR2AP28223 471 aa16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 ADSLP30566 484 aaPredicted RBP16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 HOXC12P31275 282 aa16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 IDUAP35475 653 aa16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 FOXG1P55316 489 aaPredicted RBP16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 ADAM8P78325 824 aa16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 EGR4Q05215 589 aa16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 SF3A3Q12874 501 aaKnown RBP eCLIP16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 OR7A5Q15622 319 aa16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 FBXW9Q5XUX1 488 aa16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 DHDDSQ86SQ9 333 aa16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 TGIF2LYQ8IUE0 185 aa16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 ZNF433Q8N7K0 673 aaPredicted RBP16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 LILRB1Q8NHL6 650 aaPredicted RBP16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 IGFBPL1Q8WX77 278 aa16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 HSD17B8Q92506 261 aa16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 NAA11Q9BSU3 229 aaPredicted RBP16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 UBTD1Q9HAC8 227 aa16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 FGFR1OP2Q9NVK5 253 aa16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 FLVCR1Q9Y5Y0 555 aa16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 ITPR3Q14573 2671 aa16.19■□□□□ 0.18
SMARCAL1-205ENST00000425815 GPR171O14626 319 aa16.18■□□□□ 0.18
SMARCAL1-205ENST00000425815 TPST2O60704 377 aa16.18■□□□□ 0.18
SMARCAL1-205ENST00000425815 MFN2O95140 757 aa16.18■□□□□ 0.18
SMARCAL1-205ENST00000425815 SLC6A2P23975 617 aa16.18■□□□□ 0.18
SMARCAL1-205ENST00000425815 GZMMP51124 257 aa16.18■□□□□ 0.18
SMARCAL1-205ENST00000425815 MTPNP58546 118 aa16.18■□□□□ 0.18
SMARCAL1-205ENST00000425815 DMTNQ08495 405 aa16.18■□□□□ 0.18
SMARCAL1-205ENST00000425815 C1orf140Q5VVS0 124 aa16.18■□□□□ 0.18
SMARCAL1-205ENST00000425815 ALKBH2Q6NS38 261 aa16.18■□□□□ 0.18
SMARCAL1-205ENST00000425815 LSMEM1Q8N8F7 131 aa16.18■□□□□ 0.18
SMARCAL1-205ENST00000425815 PTDSS2Q9BVG9 487 aa16.18■□□□□ 0.18
SMARCAL1-205ENST00000425815 CACYBPQ9HB71 228 aaKnown RBP16.18■□□□□ 0.18
SMARCAL1-205ENST00000425815 BEX4Q9NWD9 120 aaPredicted RBP16.18■□□□□ 0.18
SMARCAL1-205ENST00000425815 CORO2BQ9UQ03 480 aa16.18■□□□□ 0.18
SMARCAL1-205ENST00000425815 PDLIM1O00151 329 aa16.17■□□□□ 0.18
SMARCAL1-205ENST00000425815 MRPL33O75394 65 aaKnown RBP16.17■□□□□ 0.18
SMARCAL1-205ENST00000425815 GPIP06744 558 aa16.17■□□□□ 0.18
SMARCAL1-205ENST00000425815 AQP1P29972 269 aa16.17■□□□□ 0.18
SMARCAL1-205ENST00000425815 NR1H2P55055 460 aa16.17■□□□□ 0.18
SMARCAL1-205ENST00000425815 PCBP3P57721 371 aaKnown RBP16.17■□□□□ 0.18
SMARCAL1-205ENST00000425815 GUCY1A3Q02108 690 aa16.17■□□□□ 0.18
SMARCAL1-205ENST00000425815 NCMAPQ5T1S8 102 aa16.17■□□□□ 0.18
SMARCAL1-205ENST00000425815 OTUD3Q5T2D3 398 aaPredicted RBP16.17■□□□□ 0.18
SMARCAL1-205ENST00000425815 C6orf89Q6UWU4 347 aa16.17■□□□□ 0.18
SMARCAL1-205ENST00000425815 ZNF704Q6ZNC4 412 aaPredicted RBP16.17■□□□□ 0.18
SMARCAL1-205ENST00000425815 HIPK4Q8NE63 616 aa16.17■□□□□ 0.18
SMARCAL1-205ENST00000425815 WFDC11Q8NEX6 87 aa16.17■□□□□ 0.18
SMARCAL1-205ENST00000425815 OR52E4Q8NGH9 312 aa16.17■□□□□ 0.18
SMARCAL1-205ENST00000425815 STK35Q8TDR2 534 aa16.17■□□□□ 0.18
SMARCAL1-205ENST00000425815 APH1AQ96BI3 265 aa16.17■□□□□ 0.18
SMARCAL1-205ENST00000425815 KTI12Q96EK9 354 aaPredicted RBP16.17■□□□□ 0.18
SMARCAL1-205ENST00000425815 ZNF385AQ96PM9 386 aaKnown RBP16.17■□□□□ 0.18
SMARCAL1-205ENST00000425815 PIP5K1AQ99755 562 aa16.17■□□□□ 0.18
SMARCAL1-205ENST00000425815 USB1Q9BQ65 265 aaKnown RBP16.17■□□□□ 0.18
SMARCAL1-205ENST00000425815 KAT8Q9H7Z6 458 aaKnown RBP16.17■□□□□ 0.18
SMARCAL1-205ENST00000425815 FREM1Q5H8C1 2179 aa16.16■□□□□ 0.18
SMARCAL1-205ENST00000425815 A0A1B0GWA3 101 aa16.16■□□□□ 0.18
SMARCAL1-205ENST00000425815 DPRXA6NFQ7 191 aa16.16■□□□□ 0.18
SMARCAL1-205ENST00000425815 AQP7P3A6NL99 342 aa16.16■□□□□ 0.18
SMARCAL1-205ENST00000425815 FTCDNL1E5RQL4 147 aa16.16■□□□□ 0.18
SMARCAL1-205ENST00000425815 ANGPT2O15123 496 aa16.16■□□□□ 0.18
SMARCAL1-205ENST00000425815 ARFIP2P53365 341 aa16.16■□□□□ 0.18
SMARCAL1-205ENST00000425815 FOXD4Q12950 439 aaPredicted RBP16.16■□□□□ 0.18
SMARCAL1-205ENST00000425815 NFYCQ13952 458 aa16.16■□□□□ 0.18
SMARCAL1-205ENST00000425815 CAPRIN1Q14444 709 aaKnown RBP16.16■□□□□ 0.18
SMARCAL1-205ENST00000425815 NET1Q7Z628 596 aaPredicted RBP16.16■□□□□ 0.18
SMARCAL1-205ENST00000425815 KRT73Q86Y46 540 aa16.16■□□□□ 0.18
SMARCAL1-205ENST00000425815 OR9K2Q8NGE7 335 aa16.16■□□□□ 0.18
SMARCAL1-205ENST00000425815 SPATA5L1Q9BVQ7 753 aa16.16■□□□□ 0.18
SMARCAL1-205ENST00000425815 SF3B5Q9BWJ5 86 aaKnown RBP16.16■□□□□ 0.18
SMARCAL1-205ENST00000425815 CCDC134Q9H6E4 229 aa16.16■□□□□ 0.18
SMARCAL1-205ENST00000425815 SAR1AQ9NR31 198 aa16.16■□□□□ 0.18
SMARCAL1-205ENST00000425815 DLL4Q9NR61 685 aa16.16■□□□□ 0.18
SMARCAL1-205ENST00000425815 MALT1Q9UDY8 824 aa16.16■□□□□ 0.18
SMARCAL1-205ENST00000425815 PRR14LQ5THK1 2151 aa16.16■□□□□ 0.18
SMARCAL1-205ENST00000425815 IGKV1D-42A0A075B6H8 117 aa16.15■□□□□ 0.18
SMARCAL1-205ENST00000425815 M0QX08 132 aa16.15■□□□□ 0.18
SMARCAL1-205ENST00000425815 FZD7O75084 574 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms