RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 RIN1Q13671 783 aa11.98□□□□□ -0.49
COL12A1-205ENST00000425443 DEFB110Q30KQ9 67 aa11.98□□□□□ -0.49
COL12A1-205ENST00000425443 ZNF527Q8NB42 609 aa11.98□□□□□ -0.49
COL12A1-205ENST00000425443 SLC37A3Q8NCC5 494 aa11.98□□□□□ -0.49
COL12A1-205ENST00000425443 C17orf47Q8NEP4 570 aa11.98□□□□□ -0.49
COL12A1-205ENST00000425443 FAM131CQ96AQ9 280 aa11.98□□□□□ -0.49
COL12A1-205ENST00000425443 ABHD1Q96SE0 405 aa11.98□□□□□ -0.49
COL12A1-205ENST00000425443 WSB2Q9NYS7 404 aaPredicted RBP11.98□□□□□ -0.49
COL12A1-205ENST00000425443 ATXN7L1Q9ULK2 861 aaPredicted RBP11.98□□□□□ -0.49
COL12A1-205ENST00000425443 SLC43A1O75387 559 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 CDC123O75794 336 aaPredicted RBP11.97□□□□□ -0.49
COL12A1-205ENST00000425443 GPR75O95800 540 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 OR1Q1Q15612 314 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 SLC25A35Q3KQZ1 300 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 BCL2L15Q5TBC7 163 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 TIGD3Q6B0B8 471 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 MZT2BQ6NZ67 158 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 RFLNBQ8N5W9 214 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 KISS1RQ969F8 398 aaPredicted RBP11.97□□□□□ -0.49
COL12A1-205ENST00000425443 TCEAL2Q9H3H9 227 aaPredicted RBP11.97□□□□□ -0.49
COL12A1-205ENST00000425443 CCDC86Q9H6F5 360 aaKnown RBP11.97□□□□□ -0.49
COL12A1-205ENST00000425443 CLEC1BQ9P126 229 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 TDRD6O60522 2096 aaKnown RBP11.97□□□□□ -0.49
COL12A1-205ENST00000425443 TNFSF14O43557 240 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 PRKNO60260 465 aaPredicted RBP11.97□□□□□ -0.49
COL12A1-205ENST00000425443 BRINP1O60477 761 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 SLC6A1P30531 599 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 CASP6P55212 293 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 YPEL5P62699 121 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 ACSM1Q08AH1 577 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 FCN2Q15485 313 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 PLA1AQ53H76 456 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 THSD4Q6ZMP0 1018 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 C9orf62Q8N4C0 152 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 TMEM239Q8WW34 195 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 PTCHD1Q96NR3 888 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 PRSS27Q9BQR3 290 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 GSDMCQ9BYG8 508 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 BEX1Q9HBH7 125 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 LYRM4Q9HD34 91 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 ZMIZ1Q9ULJ6 1067 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 ENTPD2Q9Y5L3 495 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 OR2W5A6NFC9 320 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 FABP7O15540 132 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 GMDSO60547 372 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 SMIM10L1P0DMW3 83 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 HTR2AP28223 471 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 MRPS21P82921 87 aaKnown RBP11.97□□□□□ -0.49
COL12A1-205ENST00000425443 GXYLT1Q4G148 440 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 METAP1DQ6UB28 335 aaPredicted RBP11.97□□□□□ -0.49
COL12A1-205ENST00000425443 ARL14Q8N4G2 192 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 ACBD7Q8N6N7 88 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 OR11H7Q8NGC8 314 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 OR52N1Q8NH53 320 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 FLVCR1-AS1Q8TAF5 88 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 BAHD1Q8TBE0 780 aaPredicted RBP11.97□□□□□ -0.49
COL12A1-205ENST00000425443 SMIM10Q96HG1 83 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 THAP7Q9BT49 309 aaPredicted RBP11.97□□□□□ -0.49
COL12A1-205ENST00000425443 TMEM27Q9HBJ8 222 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 SLCO1C1Q9NYB5 712 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 RASD1Q9Y272 281 aa11.97□□□□□ -0.49
COL12A1-205ENST00000425443 FANCMQ8IYD8 2048 aa11.96□□□□□ -0.49
COL12A1-205ENST00000425443 A0A0G2JK05 382 aa11.96□□□□□ -0.49
COL12A1-205ENST00000425443 A0A0J9YY10 115 aa11.96□□□□□ -0.49
COL12A1-205ENST00000425443 FAM86C2PA6NEL3 165 aa11.96□□□□□ -0.49
COL12A1-205ENST00000425443 PSMD9O00233 223 aa11.96□□□□□ -0.49
COL12A1-205ENST00000425443 EEF1E1O43324 174 aaKnown RBP11.96□□□□□ -0.49
COL12A1-205ENST00000425443 RDH16O75452 317 aa11.96□□□□□ -0.49
COL12A1-205ENST00000425443 THBS1P07996 1170 aa11.96□□□□□ -0.49
COL12A1-205ENST00000425443 NID1P14543 1247 aa11.96□□□□□ -0.49
COL12A1-205ENST00000425443 ZNF136P52737 540 aa11.96□□□□□ -0.49
COL12A1-205ENST00000425443 RAB30Q15771 203 aa11.96□□□□□ -0.49
COL12A1-205ENST00000425443 ESPNLQ6ZVH7 1005 aa11.96□□□□□ -0.49
COL12A1-205ENST00000425443 TMEM52Q8NDY8 209 aa11.96□□□□□ -0.49
COL12A1-205ENST00000425443 OR11H4Q8NGC9 324 aa11.96□□□□□ -0.49
COL12A1-205ENST00000425443 SLC37A2Q8TED4 501 aa11.96□□□□□ -0.49
COL12A1-205ENST00000425443 DNAJA3Q96EY1 480 aa11.96□□□□□ -0.49
COL12A1-205ENST00000425443 ZFP3Q96NJ6 502 aa11.96□□□□□ -0.49
COL12A1-205ENST00000425443 NIPAL2Q9H841 368 aa11.96□□□□□ -0.49
COL12A1-205ENST00000425443 ENAMQ9NRM1 1142 aa11.96□□□□□ -0.49
COL12A1-205ENST00000425443 POT1Q9NUX5 634 aa11.96□□□□□ -0.49
COL12A1-205ENST00000425443 SIDT1Q9NXL6 827 aaKnown RBP11.96□□□□□ -0.49
COL12A1-205ENST00000425443 MED31Q9Y3C7 131 aa11.96□□□□□ -0.49
COL12A1-205ENST00000425443 CFAP54Q96N23 3096 aa11.96□□□□□ -0.49
COL12A1-205ENST00000425443 H3BSH0 61 aa11.96□□□□□ -0.5
COL12A1-205ENST00000425443 CHP2O43745 196 aa11.96□□□□□ -0.5
COL12A1-205ENST00000425443 RGS9O75916 674 aaPredicted RBP11.96□□□□□ -0.5
COL12A1-205ENST00000425443 BMP8BP34820 402 aa11.96□□□□□ -0.5
COL12A1-205ENST00000425443 LSSP48449 732 aa11.96□□□□□ -0.5
COL12A1-205ENST00000425443 CAPZA1P52907 286 aa11.96□□□□□ -0.5
COL12A1-205ENST00000425443 PPP1CAP62136 330 aa11.96□□□□□ -0.5
COL12A1-205ENST00000425443 ADAM15Q13444 863 aa11.96□□□□□ -0.5
COL12A1-205ENST00000425443 HTR4Q13639 388 aa11.96□□□□□ -0.5
COL12A1-205ENST00000425443 ZNHIT3Q15649 155 aaPredicted RBP11.96□□□□□ -0.5
COL12A1-205ENST00000425443 NIPAL3Q6P499 406 aa11.96□□□□□ -0.5
COL12A1-205ENST00000425443 BMP8AQ7Z5Y6 402 aa11.96□□□□□ -0.5
COL12A1-205ENST00000425443 PLCZ1Q86YW0 608 aa11.96□□□□□ -0.5
COL12A1-205ENST00000425443 OR4D9Q8NGE8 314 aa11.96□□□□□ -0.5
COL12A1-205ENST00000425443 PTP4A1Q93096 173 aa11.96□□□□□ -0.5
COL12A1-205ENST00000425443 ORAI1Q96D31 301 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms