RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 CEP55Q53EZ4 464 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 PPM1LQ5SGD2 360 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 OGFRL1Q5TC84 451 aaPredicted RBP2.55□□□□□ -2
LINC01040-201ENST00000425048 ATF7IP2Q5U623 682 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 C1orf189Q5VU69 101 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 UBE2UQ5VVX9 321 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 LPCAT4Q643R3 524 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 PM20D1Q6GTS8 502 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 BLOC1S2Q6QNY1 142 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 LPCAT2Q7L5N7 544 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 MOB1BQ7L9L4 216 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 KDM3BQ7LBC6 1761 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 NIPA1Q7RTP0 329 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 CROCCP2Q86T23 111 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 CDR2LQ86X02 465 aaPredicted RBP2.55□□□□□ -2
LINC01040-201ENST00000425048 LRRC6Q86X45 466 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 TIGD4Q8IY51 512 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 ZNF786Q8N393 782 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 NAT8LQ8N9F0 302 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 COL22A1Q8NFW1 1626 aaPredicted RBP2.55□□□□□ -2
LINC01040-201ENST00000425048 OR6C4Q8NGE1 309 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 OR5H6Q8NGV6 325 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 SPATA18Q8TC71 538 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 FBXO25Q8TCJ0 367 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 ZNF606Q8WXB4 792 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 ESR2Q92731 530 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 STMN2Q93045 179 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 ISOC1Q96CN7 298 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 RNF170Q96K19 258 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 ARL5BQ96KC2 179 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 CNDP1Q96KN2 507 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 C9orf85Q96MD7 179 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 TCEANC2Q96MN5 208 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 ZNF578Q96N58 590 aaPredicted RBP2.55□□□□□ -2
LINC01040-201ENST00000425048 GAL3ST1Q99999 423 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 ZSCAN5AQ9BUG6 496 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 NUSAP1Q9BXS6 441 aaKnown RBP2.55□□□□□ -2
LINC01040-201ENST00000425048 NT5C3AQ9H0P0 336 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 RPF2Q9H7B2 306 aaKnown RBP2.55□□□□□ -2
LINC01040-201ENST00000425048 RMND5AQ9H871 391 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 MCCC2Q9HCC0 563 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 MYO10Q9HD67 2058 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 MRPL40Q9NQ50 206 aaKnown RBP2.55□□□□□ -2
LINC01040-201ENST00000425048 FAM212BQ9NTI7 297 aaPredicted RBP2.55□□□□□ -2
LINC01040-201ENST00000425048 TAS2R1Q9NYW7 299 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 ACTR3BQ9P1U1 418 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 CYB5R1Q9UHQ9 305 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 TEKT2Q9UIF3 430 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 APPL1Q9UKG1 709 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 PLA2G4CQ9UP65 541 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 PDE10AQ9Y233 779 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 UGT2A1Q9Y4X1 527 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 SNX5Q9Y5X3 404 aa2.55□□□□□ -2
LINC01040-201ENST00000425048 KIAA1217Q5T5P2 1943 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 ARFGEF2Q9Y6D5 1785 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 RIMBP3Q9UFD9 1639 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 NWD1Q149M9 1564 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 SETBP1Q9Y6X0 1596 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 C1orf167Q5SNV9 1468 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 MRC2Q9UBG0 1479 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 FRMPD4Q14CM0 1322 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 ZNF532Q9HCE3 1301 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 A0A087WV48 116 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 A0A1B0GTQ1 180 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 ARHGEF37A1IGU5 675 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 LRCOL1A6NCL2 159 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 SLC9B1P1A6NJY1 282 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 LEUTXA8MZ59 168 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 H3BMQ9 156 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 H3BNH8 94 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 TXNDC9O14530 226 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 TM9SF1O15321 606 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 RANBP6O60518 1105 aaKnown RBP2.54□□□□□ -2
LINC01040-201ENST00000425048 EDF1O60869 148 aaKnown RBP2.54□□□□□ -2
LINC01040-201ENST00000425048 SPAG7O75391 227 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 SCO1O75880 301 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 OR7A10O76100 309 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 BAG2O95816 211 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 GH1P01241 217 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 RPS17P08708 135 aaKnown RBP2.54□□□□□ -2
LINC01040-201ENST00000425048 FAM58BPP0C7Q3 252 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 SLC2A3P11169 496 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 KRT13P13646 458 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 GFAPP14136 432 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 CCNA2P20248 432 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 DCKP27707 260 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 HNRNPH3P31942 346 aaKnown RBP2.54□□□□□ -2
LINC01040-201ENST00000425048 RFC4P35249 363 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 SERPINB5P36952 375 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 HPCAL1P37235 193 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 GP5P40197 560 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 CD86P42081 329 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 NAMPTP43490 491 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 ASMTP46597 345 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 SLCO1A2P46721 670 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 OR3A4PP47883 348 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 NPBWR1P48145 328 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 SLC12A3P55017 1021 aa2.54□□□□□ -2
LINC01040-201ENST00000425048 HADHBP55084 474 aaKnown RBP2.54□□□□□ -2
LINC01040-201ENST00000425048 COPZ1P61923 177 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms