RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 FCRLAQ7L513 359 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 NIPA1Q7RTP0 329 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 SSX6Q7RTT6 188 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 ZFAND4Q86XD8 727 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 FUNDC1Q8IVP5 155 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 GID4Q8IVV7 300 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 BOD1L2Q8IYS8 172 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 LINC00518Q8N0U6 118 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 GBGT1Q8N5D6 347 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 TRAM1L1Q8N609 369 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 CCNYL1Q8N7R7 359 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 LRTM2Q8N967 370 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 OR2AP1Q8NGE2 309 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 OR5T2Q8NGG2 359 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 OR5M1Q8NGP8 315 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 DNAJB3Q8WWF6 145 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 CDS1Q92903 461 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 UBE2E3Q969T4 207 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 ZBTB9Q96C00 473 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 CXorf40BQ96DE9 158 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 CMTM5Q96DZ9 223 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 PCED1BQ96HM7 432 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 C10orf90Q96M02 699 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 ZNF641Q96N77 438 aaPredicted RBP3.25□□□□□ -1.89
SF3B1-205ENST00000424674 TNFRSF13CQ96RJ3 184 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 ERGIC2Q96RQ1 377 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 CDCA3Q99618 268 aaPredicted RBP3.25□□□□□ -1.89
SF3B1-205ENST00000424674 NIPSNAP3BQ9BS92 247 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 TIMM29Q9BSF4 260 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 NICN1Q9BSH3 213 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 URM1Q9BTM9 101 aaKnown RBP3.25□□□□□ -1.89
SF3B1-205ENST00000424674 ZNF426Q9BUY5 554 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 PAPOLGQ9BWT3 736 aaKnown RBP3.25□□□□□ -1.89
SF3B1-205ENST00000424674 UCK2Q9BZX2 261 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 PRSS22Q9GZN4 317 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 COMMD4Q9H0A8 199 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 SP140LQ9H930 580 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 FZD3Q9NPG1 666 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 PRSS16Q9NQE7 514 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 SAMSN1Q9NSI8 373 aaKnown RBP3.25□□□□□ -1.89
SF3B1-205ENST00000424674 PLCXD1Q9NUJ7 323 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 SLC38A7Q9NVC3 462 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 C1orf109Q9NX04 203 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 DUS2Q9NX74 493 aaKnown RBP3.25□□□□□ -1.89
SF3B1-205ENST00000424674 GALPQ9UBC7 116 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 PURGQ9UJV8 347 aaKnown RBP3.25□□□□□ -1.89
SF3B1-205ENST00000424674 TINAGQ9UJW2 476 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 STOML2Q9UJZ1 356 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 ZNF221Q9UK13 617 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 POMT2Q9UKY4 750 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 STUB1Q9UNE7 303 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 SLC22A13Q9Y226 551 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 TBL2Q9Y4P3 447 aaKnown RBP3.25□□□□□ -1.89
SF3B1-205ENST00000424674 V9GYY9 64 aa3.25□□□□□ -1.89
SF3B1-205ENST00000424674 ELP1O95163 1332 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 ADGRA3Q8IWK6 1321 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 SMIM35A0A1B0GVV1 85 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 PP2D1A8MPX8 630 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 A8MVM7 634 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 TMEM114B3SHH9 223 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 M0R036 132 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 DYNC1I1O14576 645 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 ZNF195O14628 629 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 TFECO14948 347 aaPredicted RBP3.24□□□□□ -1.89
SF3B1-205ENST00000424674 SLC16A4O15374 487 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 B4GALT5O43286 388 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 KIAA0513O60268 411 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 SC5DO75845 299 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 ATP5LO75964 103 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 PLEKHA8P1O95397 391 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 PSMG1O95456 288 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 TNNC2P02585 160 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 FGGP02679 453 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 MMP1P03956 469 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 GP1BAP07359 652 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 CT62P0C5K7 136 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 RD3LP0DJH9 198 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 ADORA3P0DMS8 318 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 HSPD1P10809 573 aaKnown RBP3.24□□□□□ -1.89
SF3B1-205ENST00000424674 ACP2P11117 423 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 CHRNB1P11230 501 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 GCAP28676 217 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 FOXN2P32314 431 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 ARR3P36575 388 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 CAPZBP47756 277 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 PGFP49763 221 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 RIPK4P57078 832 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 CXCR4P61073 352 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 SEC61A1P61619 476 aaKnown RBP3.24□□□□□ -1.89
SF3B1-205ENST00000424674 HSF1Q00613 529 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 OC90Q02509 493 aaPredicted RBP3.24□□□□□ -1.89
SF3B1-205ENST00000424674 PDK2Q15119 407 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 ZBTB6Q15916 424 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 COX19Q49B96 90 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 CYBRD1Q53TN4 286 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 FGD3Q5JSP0 725 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 LY6G6FQ5SQ64 297 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 TPRG1LQ5T0D9 272 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 C1orf220Q5T0J3 134 aa3.24□□□□□ -1.89
SF3B1-205ENST00000424674 IDNKQ5T6J7 187 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms