RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 PLEKHM1Q9Y4G2 1056 aa13.21□□□□□ -0.29
MSH5-206ENST00000423982 TCRBV16S1A1N1A0A5B0 115 aa13.21□□□□□ -0.29
MSH5-206ENST00000423982 OR52A4PA6NMU1 304 aa13.21□□□□□ -0.29
MSH5-206ENST00000423982 OR5F1O95221 314 aa13.21□□□□□ -0.29
MSH5-206ENST00000423982 PPP1R3DO95685 299 aa13.21□□□□□ -0.29
MSH5-206ENST00000423982 SAGP10523 405 aaPredicted RBP13.21□□□□□ -0.29
MSH5-206ENST00000423982 PSMB10P40306 273 aa13.21□□□□□ -0.29
MSH5-206ENST00000423982 KIAA1024LP59773 190 aa13.21□□□□□ -0.29
MSH5-206ENST00000423982 PRDX1Q06830 199 aaKnown RBP13.21□□□□□ -0.29
MSH5-206ENST00000423982 METRNLQ641Q3 311 aa13.21□□□□□ -0.29
MSH5-206ENST00000423982 ALKAL2Q6UX46 152 aa13.21□□□□□ -0.29
MSH5-206ENST00000423982 ZMYND19Q96E35 227 aaPredicted RBP13.21□□□□□ -0.29
MSH5-206ENST00000423982 TOE1Q96GM8 510 aaKnown RBP13.21□□□□□ -0.29
MSH5-206ENST00000423982 ZNF681Q96N22 645 aa13.21□□□□□ -0.29
MSH5-206ENST00000423982 INSM2Q96T92 566 aaPredicted RBP13.21□□□□□ -0.29
MSH5-206ENST00000423982 ANKRD19PQ9H560 264 aa13.21□□□□□ -0.29
MSH5-206ENST00000423982 FKRPQ9H9S5 495 aa13.21□□□□□ -0.29
MSH5-206ENST00000423982 HRASLSQ9HDD0 168 aa13.21□□□□□ -0.29
MSH5-206ENST00000423982 SLC6A20Q9NP91 592 aa13.21□□□□□ -0.29
MSH5-206ENST00000423982 SDHAF2Q9NX18 166 aa13.21□□□□□ -0.29
MSH5-206ENST00000423982 PIPOXQ9P0Z9 390 aa13.21□□□□□ -0.29
MSH5-206ENST00000423982 MGAT4CQ9UBM8 478 aa13.21□□□□□ -0.29
MSH5-206ENST00000423982 APOBEC3BQ9UH17 382 aaKnown RBP13.21□□□□□ -0.29
MSH5-206ENST00000423982 ST6GALNAC2Q9UJ37 374 aa13.21□□□□□ -0.29
MSH5-206ENST00000423982 ZNF223Q9UK11 482 aaPredicted RBP13.21□□□□□ -0.29
MSH5-206ENST00000423982 POMT2Q9UKY4 750 aa13.21□□□□□ -0.29
MSH5-206ENST00000423982 WDR45Q9Y484 360 aa13.21□□□□□ -0.29
MSH5-206ENST00000423982 H0Y8X5 98 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 PSMD9O00233 223 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 PEX12O00623 359 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 SIGLEC5O15389 551 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 RNGTTO60942 597 aaKnown RBP13.2□□□□□ -0.3
MSH5-206ENST00000423982 DNAJB6O75190 326 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 ANXA7P20073 488 aaKnown RBP13.2□□□□□ -0.3
MSH5-206ENST00000423982 NAA10P41227 235 aaPredicted RBP13.2□□□□□ -0.3
MSH5-206ENST00000423982 CCR9P51686 369 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 ID2Q02363 134 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 SIGLEC14Q08ET2 396 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 DUSP5Q16690 384 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 OR5M10Q6IEU7 315 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 MRM1Q6IN84 353 aaKnown RBP13.2□□□□□ -0.3
MSH5-206ENST00000423982 GJD3Q8N144 294 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 MOSPD2Q8NHP6 518 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 BRIX1Q8TDN6 353 aaKnown RBP13.2□□□□□ -0.3
MSH5-206ENST00000423982 ERMAPQ96PL5 475 aaPredicted RBP13.2□□□□□ -0.3
MSH5-206ENST00000423982 NPTNQ9Y639 398 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 RNF215Q9Y6U7 377 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 hCG_1807616A0A1W2PRN6 198 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 IMPA2O14732 288 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 PPM1BO75688 479 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 PDGFBP01127 241 aaPredicted RBP13.2□□□□□ -0.3
MSH5-206ENST00000423982 SLC35G4P0C7Q5 338 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 GLULP15104 373 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 UGT2B7P16662 529 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 MPIP34949 423 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 RPS15P62841 145 aaKnown RBP13.2□□□□□ -0.3
MSH5-206ENST00000423982 TRA2BP62995 288 aaKnown RBP13.2□□□□□ -0.3
MSH5-206ENST00000423982 SGCGQ13326 291 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 ARHGAP19Q14CB8 494 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 NHLRC3Q5JS37 347 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 SEZ6L2Q6UXD5 910 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 LNX2Q8N448 690 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 KCT2Q8NC54 265 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 OR52B4Q8NGK2 314 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 OR6M1Q8NGM8 313 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 COQ8AQ8NI60 647 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 LHFPL5Q8TAF8 219 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 GRHL3Q8TE85 626 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 SMIM4Q8WVI0 70 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 TMEM239Q8WW34 195 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 RAB7BQ96AH8 199 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 ACTRT3Q9BYD9 372 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 FN3KQ9H479 309 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 LYARQ9NX58 379 aaKnown RBP13.2□□□□□ -0.3
MSH5-206ENST00000423982 COPZ2Q9P299 210 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 KCNK6Q9Y257 313 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 FKBP7Q9Y680 259 aa13.2□□□□□ -0.3
MSH5-206ENST00000423982 IDSB3KWA1 339 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 FLRT2O43155 660 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 VEGFDO43915 354 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 MELKQ14680 651 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 IRF4Q15306 451 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 TMEM52BQ4KMG9 183 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 APOOLQ6UXV4 268 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 STPG2Q8N412 459 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 ESX1Q8N693 406 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 DMRTA2Q96SC8 542 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 TMEM74BQ9NUR3 256 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 ANKRD10Q9NXR5 420 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 SPHK1Q9NYA1 384 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 ZNF69Q9UC07 566 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 KCNE5Q9UJ90 142 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 CAMK2AQ9UQM7 478 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 CACNA1IQ9P0X4 2223 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 ANKRD61A6NGH8 418 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 SIX6O95475 246 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 GDI2P50395 445 aaKnown RBP13.19□□□□□ -0.3
MSH5-206ENST00000423982 NRG3P56975 720 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 RPS11P62280 158 aaKnown RBP eCLIP13.19□□□□□ -0.3
MSH5-206ENST00000423982 OR1Q1Q15612 314 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms