RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 GABRR3A8MPY1 467 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 MYO1GB0I1T2 1018 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 NPIPB11E5RHQ5 1161 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 SLCO1B7G3V0H7 640 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 PEX11AO75192 247 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 LYPLA1O75608 230 aaPredicted RBP2.26□□□□□ -2.05
VPS13A-208ENST00000423463 ERAL1O75616 437 aaKnown RBP2.26□□□□□ -2.05
VPS13A-208ENST00000423463 BCAS2O75934 225 aaPredicted RBP2.26□□□□□ -2.05
VPS13A-208ENST00000423463 IGKV3-11P04433 115 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 ATP1B1P05026 303 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 PRSS2P07478 247 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 IFI6P09912 130 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 PRPS2P11908 318 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 ZNF12P17014 697 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 NT5EP21589 574 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 MPIP34949 423 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 RPL3P39023 403 aaKnown RBP2.26□□□□□ -2.05
VPS13A-208ENST00000423463 PSMB10P40306 273 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 ASMTP46597 345 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 AMTP48728 403 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 CYB561P49447 251 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 SSR4P51571 173 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 EMX2Q04743 252 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 EGR4Q05215 589 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 BST1Q10588 318 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 MAD2L1Q13257 205 aaPredicted RBP2.26□□□□□ -2.05
VPS13A-208ENST00000423463 CEBPEQ15744 281 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 INAQ16352 499 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 IZUMO4Q1ZYL8 232 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 ATP6AP1LQ52LC2 224 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 RFTN2Q52LD8 501 aaPredicted RBP2.26□□□□□ -2.05
VPS13A-208ENST00000423463 XKR7Q5GH72 579 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 PIGGQ5H8A4 983 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 C6orf136Q5SQH8 315 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 SLC25A25Q6KCM7 469 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 OPN5Q6U736 354 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 DGAT2L6Q6ZPD8 337 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 FAM9CQ8IZT9 166 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 BEST3Q8N1M1 668 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 LRRC25Q8N386 305 aaPredicted RBP2.26□□□□□ -2.05
VPS13A-208ENST00000423463 TMEM156Q8N614 296 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 CATSPER1Q8NEC5 780 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 OR2T11Q8NH01 316 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 ZNF675Q8TD23 568 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 NUDCD2Q8WVJ2 157 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 UCN3Q969E3 161 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 MTERF3Q96E29 417 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 ZNF681Q96N22 645 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 BBS4Q96RK4 519 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 SORT1Q99523 831 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 NPAS2Q99743 824 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 SLCO5A1Q9H2Y9 848 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 REEP4Q9H6H4 257 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 MIEF1Q9NQG6 463 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 SLC35C2Q9NQQ7 365 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 CYSLTR2Q9NS75 346 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 ANKRD10Q9NXR5 420 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 NDRG3Q9UGV2 375 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 ZNF639Q9UID6 485 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 ZNF223Q9UK11 482 aaPredicted RBP2.26□□□□□ -2.05
VPS13A-208ENST00000423463 MKLN1Q9UL63 735 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 EIF3LQ9Y262 564 aaKnown RBP2.26□□□□□ -2.05
VPS13A-208ENST00000423463 FIS1Q9Y3D6 152 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 ADAM18Q9Y3Q7 739 aa2.26□□□□□ -2.05
VPS13A-208ENST00000423463 FAM208BQ5VWN6 2430 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 DMDP11532 3685 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 CACNA1GO43497 2377 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 MED13Q9UHV7 2174 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 IGHV4-28A0A0C4DH34 117 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 TRPC5OSA6NMA1 111 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 KLRC4-KLRK1H3BQV0 150 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 J3QKU1 62 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 PLOD2O00469 737 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 LSM1O15116 133 aaKnown RBP2.25□□□□□ -2.05
VPS13A-208ENST00000423463 ATP8B1O43520 1251 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 PLOD3O60568 738 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 SNNO75324 88 aaPredicted RBP2.25□□□□□ -2.05
VPS13A-208ENST00000423463 PRKRAO75569 313 aaKnown RBP2.25□□□□□ -2.05
VPS13A-208ENST00000423463 SP1P08047 785 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 BCKDHAP12694 445 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 LBPP18428 481 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 S1PR1P21453 382 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 DRD5P21918 477 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 FEN1P39748 380 aaKnown RBP2.25□□□□□ -2.05
VPS13A-208ENST00000423463 ERVK-8P63133 956 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 RPL38P63173 70 aaKnown RBP2.25□□□□□ -2.05
VPS13A-208ENST00000423463 PSPHP78330 225 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 OC90Q02509 493 aaPredicted RBP2.25□□□□□ -2.05
VPS13A-208ENST00000423463 FGFBP1Q14512 234 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 MED22Q15528 200 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 OR1C1Q15619 314 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 IL23RQ5VWK5 629 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 CES4AQ5XG92 561 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 FAM219BQ5XKK7 198 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 C8orf82Q6P1X6 216 aaPredicted RBP2.25□□□□□ -2.05
VPS13A-208ENST00000423463 TMEM154Q6P9G4 183 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 C16orf54Q6UWD8 224 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 TICAM1Q8IUC6 712 aa2.25□□□□□ -2.05
VPS13A-208ENST00000423463 DND1Q8IYX4 353 aaKnown RBP2.25□□□□□ -2.05
VPS13A-208ENST00000423463 TAGAPQ8N103 731 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms