RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 SRXN1Q9BYN0 137 aa15.24■□□□□ 0.03
COL7A1-202ENST00000422991 SLC19A3Q9BZV2 496 aa15.24■□□□□ 0.03
COL7A1-202ENST00000422991 DENND2DQ9H6A0 471 aaPredicted RBP15.24■□□□□ 0.03
COL7A1-202ENST00000422991 PAQR5Q9NXK6 330 aaPredicted RBP15.24■□□□□ 0.03
COL7A1-202ENST00000422991 ALKBH4Q9NXW9 302 aa15.24■□□□□ 0.03
COL7A1-202ENST00000422991 CLCF1Q9UBD9 225 aa15.24■□□□□ 0.03
COL7A1-202ENST00000422991 SH3BGRL2Q9UJC5 107 aa15.24■□□□□ 0.03
COL7A1-202ENST00000422991 TESMINQ9Y4I5 508 aa15.24■□□□□ 0.03
COL7A1-202ENST00000422991 TRAV36DV7A0A075B6V5 113 aa15.23■□□□□ 0.03
COL7A1-202ENST00000422991 TRGV8A0A0C4DH27 118 aa15.23■□□□□ 0.03
COL7A1-202ENST00000422991 LIPT2A6NK58 231 aa15.23■□□□□ 0.03
COL7A1-202ENST00000422991 KDM4EB2RXH2 506 aaPredicted RBP15.23■□□□□ 0.03
COL7A1-202ENST00000422991 ANKRD65E5RJM6 399 aa15.23■□□□□ 0.03
COL7A1-202ENST00000422991 SULT2B1O00204 365 aa15.23■□□□□ 0.03
COL7A1-202ENST00000422991 DNPH1O43598 174 aa15.23■□□□□ 0.03
COL7A1-202ENST00000422991 FZD7O75084 574 aa15.23■□□□□ 0.03
COL7A1-202ENST00000422991 FKBP6O75344 327 aa15.23■□□□□ 0.03
COL7A1-202ENST00000422991 AHSA1O95433 338 aa15.23■□□□□ 0.03
COL7A1-202ENST00000422991 UGT2B15P54855 530 aa15.23■□□□□ 0.03
COL7A1-202ENST00000422991 CARD18P57730 90 aa15.23■□□□□ 0.03
COL7A1-202ENST00000422991 RAC3P60763 192 aa15.23■□□□□ 0.03
COL7A1-202ENST00000422991 CSNK2A1P68400 391 aaPredicted RBP15.23■□□□□ 0.03
COL7A1-202ENST00000422991 NSUN5P2Q63ZY6 315 aa15.23■□□□□ 0.03
COL7A1-202ENST00000422991 TTC33Q6PID6 262 aaPredicted RBP15.23■□□□□ 0.03
COL7A1-202ENST00000422991 RPTNQ6XPR3 784 aa15.23■□□□□ 0.03
COL7A1-202ENST00000422991 C3P1Q6ZMU1 363 aa15.23■□□□□ 0.03
COL7A1-202ENST00000422991 CHMP1BQ7LBR1 199 aa15.23■□□□□ 0.03
COL7A1-202ENST00000422991 TMEM239Q8WW34 195 aa15.23■□□□□ 0.03
COL7A1-202ENST00000422991 OSTF1Q92882 214 aa15.23■□□□□ 0.03
COL7A1-202ENST00000422991 CPNE4Q96A23 557 aaPredicted RBP15.23■□□□□ 0.03
COL7A1-202ENST00000422991 HS6ST2Q96MM7 605 aa15.23■□□□□ 0.03
COL7A1-202ENST00000422991 EPYCQ99645 322 aa15.23■□□□□ 0.03
COL7A1-202ENST00000422991 FUZQ9BT04 418 aa15.23■□□□□ 0.03
COL7A1-202ENST00000422991 TIGARQ9NQ88 270 aa15.23■□□□□ 0.03
COL7A1-202ENST00000422991 TRAPPC4Q9Y296 219 aa15.23■□□□□ 0.03
COL7A1-202ENST00000422991 ZNF175Q9Y473 711 aa15.23■□□□□ 0.03
COL7A1-202ENST00000422991 SETXQ7Z333 2677 aaKnown RBP15.22■□□□□ 0.03
COL7A1-202ENST00000422991 DOCK7Q96N67 2140 aa15.22■□□□□ 0.03
COL7A1-202ENST00000422991 CD8B2A6NJW9 211 aa15.22■□□□□ 0.03
COL7A1-202ENST00000422991 FTCDNL1E5RQL4 147 aa15.22■□□□□ 0.03
COL7A1-202ENST00000422991 GADD45GO95257 159 aa15.22■□□□□ 0.03
COL7A1-202ENST00000422991 RRM2P31350 389 aa15.22■□□□□ 0.03
COL7A1-202ENST00000422991 RPS5P46782 204 aaKnown RBP15.22■□□□□ 0.03
COL7A1-202ENST00000422991 SMIM11AP58511 58 aa15.22■□□□□ 0.03
COL7A1-202ENST00000422991 FOXD4Q12950 439 aaPredicted RBP15.22■□□□□ 0.03
COL7A1-202ENST00000422991 PON3Q15166 354 aa15.22■□□□□ 0.03
COL7A1-202ENST00000422991 SGCBQ16585 318 aa15.22■□□□□ 0.03
COL7A1-202ENST00000422991 ZNF239Q16600 458 aaKnown RBP15.22■□□□□ 0.03
COL7A1-202ENST00000422991 EIF2S3LQ2VIR3 472 aaKnown RBP15.22■□□□□ 0.03
COL7A1-202ENST00000422991 FGD3Q5JSP0 725 aa15.22■□□□□ 0.03
COL7A1-202ENST00000422991 OR2T5Q6IEZ7 315 aa15.22■□□□□ 0.03
COL7A1-202ENST00000422991 RPRMLQ8N4K4 120 aa15.22■□□□□ 0.03
COL7A1-202ENST00000422991 OR2T29Q8NH02 315 aa15.22■□□□□ 0.03
COL7A1-202ENST00000422991 OR6S1Q8NH40 331 aa15.22■□□□□ 0.03
COL7A1-202ENST00000422991 SLC7A13Q8TCU3 470 aa15.22■□□□□ 0.03
COL7A1-202ENST00000422991 ACOT11Q8WXI4 607 aaPredicted RBP15.22■□□□□ 0.03
COL7A1-202ENST00000422991 TAAR8Q969N4 342 aa15.22■□□□□ 0.03
COL7A1-202ENST00000422991 TRIB1Q96RU8 372 aa15.22■□□□□ 0.03
COL7A1-202ENST00000422991 YY1AP1Q9H869 796 aa15.22■□□□□ 0.03
COL7A1-202ENST00000422991 CALHM2Q9HA72 323 aa15.22■□□□□ 0.03
COL7A1-202ENST00000422991 MEPEQ9NQ76 525 aaPredicted RBP15.22■□□□□ 0.03
COL7A1-202ENST00000422991 COL12A1Q99715 3063 aa15.22■□□□□ 0.03
COL7A1-202ENST00000422991 A0A087WUU8 490 aa15.21■□□□□ 0.03
COL7A1-202ENST00000422991 TRBV4-1A0A0J9YWV2 114 aa15.21■□□□□ 0.03
COL7A1-202ENST00000422991 SLC22A20A6NK97 555 aa15.21■□□□□ 0.03
COL7A1-202ENST00000422991 E9PLN8 166 aa15.21■□□□□ 0.03
COL7A1-202ENST00000422991 KPNA4O00629 521 aaPredicted RBP15.21■□□□□ 0.03
COL7A1-202ENST00000422991 PIP5K1CO60331 668 aa15.21■□□□□ 0.03
COL7A1-202ENST00000422991 SYNGR4O95473 234 aa15.21■□□□□ 0.03
COL7A1-202ENST00000422991 IGF2P01344 180 aa15.21■□□□□ 0.03
COL7A1-202ENST00000422991 BGLAPP02818 100 aa15.21■□□□□ 0.03
COL7A1-202ENST00000422991 OR2B6P58173 313 aa15.21■□□□□ 0.03
COL7A1-202ENST00000422991 SLC35A1P78382 337 aa15.21■□□□□ 0.03
COL7A1-202ENST00000422991 OR7A5Q15622 319 aa15.21■□□□□ 0.03
COL7A1-202ENST00000422991 FAM69AQ5T7M9 428 aa15.21■□□□□ 0.03
COL7A1-202ENST00000422991 PODNL1Q6PEZ8 512 aa15.21■□□□□ 0.03
COL7A1-202ENST00000422991 PLXDC2Q6UX71 529 aa15.21■□□□□ 0.03
COL7A1-202ENST00000422991 B3GNT6Q6ZMB0 384 aa15.21■□□□□ 0.03
COL7A1-202ENST00000422991 PFN4Q8NHR9 129 aa15.21■□□□□ 0.03
COL7A1-202ENST00000422991 MFSD8Q8NHS3 518 aa15.21■□□□□ 0.03
COL7A1-202ENST00000422991 PRR7Q8TB68 274 aa15.21■□□□□ 0.03
COL7A1-202ENST00000422991 FNDC9Q8TBE3 224 aa15.21■□□□□ 0.03
COL7A1-202ENST00000422991 DMRTA2Q96SC8 542 aa15.21■□□□□ 0.03
COL7A1-202ENST00000422991 VKORC1Q9BQB6 163 aa15.21■□□□□ 0.03
COL7A1-202ENST00000422991 ARMC1Q9NVT9 282 aa15.21■□□□□ 0.03
COL7A1-202ENST00000422991 VNN3Q9NY84 501 aa15.21■□□□□ 0.03
COL7A1-202ENST00000422991 MCTS1Q9ULC4 181 aaKnown RBP15.21■□□□□ 0.03
COL7A1-202ENST00000422991 MEMO1Q9Y316 297 aa15.21■□□□□ 0.03
COL7A1-202ENST00000422991 MED31Q9Y3C7 131 aa15.21■□□□□ 0.03
COL7A1-202ENST00000422991 LYVE1Q9Y5Y7 322 aa15.21■□□□□ 0.03
COL7A1-202ENST00000422991 MBD3L4A6NDZ8 208 aaPredicted RBP15.2■□□□□ 0.02
COL7A1-202ENST00000422991 MBD3L3A6NE82 208 aaPredicted RBP15.2■□□□□ 0.02
COL7A1-202ENST00000422991 MBD3L5A6NJ08 208 aaPredicted RBP15.2■□□□□ 0.02
COL7A1-202ENST00000422991 ENO4A6NNW6 628 aa15.2■□□□□ 0.02
COL7A1-202ENST00000422991 SMAD9O15198 467 aaKnown RBP15.2■□□□□ 0.02
COL7A1-202ENST00000422991 OR2T1O43869 369 aa15.2■□□□□ 0.02
COL7A1-202ENST00000422991 KRT36O76013 467 aa15.2■□□□□ 0.02
COL7A1-202ENST00000422991 TGM6O95932 706 aa15.2■□□□□ 0.02
COL7A1-202ENST00000422991 CST1P01037 141 aa15.2■□□□□ 0.02
COL7A1-202ENST00000422991 FCGR2AP12318 317 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms