RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 ODF4Q2M2E3 257 aa10.03□□□□□ -0.8
DDX56-203ENST00000421223 EXOSC6Q5RKV6 272 aaKnown RBP10.03□□□□□ -0.8
DDX56-203ENST00000421223 TRIQKQ629K1 86 aa10.03□□□□□ -0.8
DDX56-203ENST00000421223 ZNF57Q68EA5 555 aaPredicted RBP10.03□□□□□ -0.8
DDX56-203ENST00000421223 THOC7Q6I9Y2 204 aaKnown RBP10.03□□□□□ -0.8
DDX56-203ENST00000421223 RPL13AP3Q6NVV1 102 aa10.03□□□□□ -0.8
DDX56-203ENST00000421223 MARCH3Q86UD3 253 aa10.03□□□□□ -0.8
DDX56-203ENST00000421223 ZNF511Q8NB15 262 aa10.03□□□□□ -0.8
DDX56-203ENST00000421223 C19orf18Q8NEA5 215 aa10.03□□□□□ -0.8
DDX56-203ENST00000421223 MOGAT1Q96PD6 335 aa10.03□□□□□ -0.8
DDX56-203ENST00000421223 BEX2Q9BXY8 128 aa10.03□□□□□ -0.8
DDX56-203ENST00000421223 SRRQ9GZT4 340 aa10.03□□□□□ -0.8
DDX56-203ENST00000421223 ADGRL4Q9HBW9 690 aa10.03□□□□□ -0.8
DDX56-203ENST00000421223 RPRD1BQ9NQG5 326 aaKnown RBP10.03□□□□□ -0.8
DDX56-203ENST00000421223 NANSQ9NR45 359 aa10.03□□□□□ -0.8
DDX56-203ENST00000421223 POLE3Q9NRF9 147 aa10.03□□□□□ -0.8
DDX56-203ENST00000421223 LILRA5A6NI73 299 aa10.02□□□□□ -0.8
DDX56-203ENST00000421223 IDSB3KWA1 339 aa10.02□□□□□ -0.8
DDX56-203ENST00000421223 POLR1CO15160 346 aaPredicted RBP10.02□□□□□ -0.8
DDX56-203ENST00000421223 CCNKO75909 580 aa10.02□□□□□ -0.8
DDX56-203ENST00000421223 UTS2O95399 124 aa10.02□□□□□ -0.8
DDX56-203ENST00000421223 PLGP00747 810 aaPredicted RBP10.02□□□□□ -0.8
DDX56-203ENST00000421223 UBL4AP11441 157 aa10.02□□□□□ -0.8
DDX56-203ENST00000421223 AHCYP23526 432 aa10.02□□□□□ -0.8
DDX56-203ENST00000421223 IL12BP29460 328 aa10.02□□□□□ -0.8
DDX56-203ENST00000421223 MAGEB1P43366 347 aa10.02□□□□□ -0.8
DDX56-203ENST00000421223 CFHR1Q03591 330 aa10.02□□□□□ -0.8
DDX56-203ENST00000421223 FUT7Q11130 342 aa10.02□□□□□ -0.8
DDX56-203ENST00000421223 VASNQ6EMK4 673 aa10.02□□□□□ -0.8
DDX56-203ENST00000421223 ARHGAP11AQ6P4F7 1023 aa10.02□□□□□ -0.8
DDX56-203ENST00000421223 LEG1Q6P5S2 330 aa10.02□□□□□ -0.8
DDX56-203ENST00000421223 LANCL3Q6ZV70 420 aa10.02□□□□□ -0.8
DDX56-203ENST00000421223 Q7L0L9 218 aa10.02□□□□□ -0.8
DDX56-203ENST00000421223 Q8N402 240 aa10.02□□□□□ -0.8
DDX56-203ENST00000421223 SLC25A45Q8N413 288 aa10.02□□□□□ -0.8
DDX56-203ENST00000421223 GHSRQ92847 366 aa10.02□□□□□ -0.8
DDX56-203ENST00000421223 HLA-CQ95604 372 aa10.02□□□□□ -0.8
DDX56-203ENST00000421223 C3orf49Q96BT1 292 aa10.02□□□□□ -0.8
DDX56-203ENST00000421223 TMCO6Q96DC7 493 aa10.02□□□□□ -0.8
DDX56-203ENST00000421223 CCDC32Q9BV29 185 aa10.02□□□□□ -0.8
DDX56-203ENST00000421223 HDHD2Q9H0R4 259 aa10.02□□□□□ -0.8
DDX56-203ENST00000421223 ZNF304Q9HCX3 659 aa10.02□□□□□ -0.8
DDX56-203ENST00000421223 UBQLN4Q9NRR5 601 aa10.02□□□□□ -0.8
DDX56-203ENST00000421223 TNRC18O15417 2968 aaPredicted RBP10.02□□□□□ -0.81
DDX56-203ENST00000421223 IGHV1OR21-1A0A087WYE8 117 aa10.02□□□□□ -0.81
DDX56-203ENST00000421223 A0A0B4J203 849 aa10.02□□□□□ -0.81
DDX56-203ENST00000421223 TEX13CA0A0J9YWL9 993 aa10.02□□□□□ -0.81
DDX56-203ENST00000421223 CPNE3O75131 537 aaKnown RBP10.02□□□□□ -0.81
DDX56-203ENST00000421223 ICOSLGO75144 302 aa10.02□□□□□ -0.81
DDX56-203ENST00000421223 RGS9O75916 674 aaPredicted RBP10.02□□□□□ -0.81
DDX56-203ENST00000421223 CSF3P09919 207 aa10.02□□□□□ -0.81
DDX56-203ENST00000421223 FBLP22087 321 aaKnown RBP10.02□□□□□ -0.81
DDX56-203ENST00000421223 RORAP35398 523 aa10.02□□□□□ -0.81
DDX56-203ENST00000421223 NUDT1P36639 197 aa10.02□□□□□ -0.81
DDX56-203ENST00000421223 NR4A2P43354 598 aa10.02□□□□□ -0.81
DDX56-203ENST00000421223 RPS5P46782 204 aaKnown RBP10.02□□□□□ -0.81
DDX56-203ENST00000421223 ARPC4P59998 168 aa10.02□□□□□ -0.81
DDX56-203ENST00000421223 KRR1Q13601 381 aaKnown RBP10.02□□□□□ -0.81
DDX56-203ENST00000421223 SERTAD2Q14140 314 aa10.02□□□□□ -0.81
DDX56-203ENST00000421223 ZNF141Q15928 474 aa10.02□□□□□ -0.81
DDX56-203ENST00000421223 C6orf183Q5T699 404 aa10.02□□□□□ -0.81
DDX56-203ENST00000421223 ASB18Q6ZVZ8 466 aa10.02□□□□□ -0.81
DDX56-203ENST00000421223 SAMD12Q8N8I0 201 aa10.02□□□□□ -0.81
DDX56-203ENST00000421223 SLC2A12Q8TD20 617 aa10.02□□□□□ -0.81
DDX56-203ENST00000421223 PDCD1LG2Q9BQ51 273 aa10.02□□□□□ -0.81
DDX56-203ENST00000421223 IER2Q9BTL4 223 aa10.02□□□□□ -0.81
DDX56-203ENST00000421223 NUDT9Q9BW91 350 aa10.02□□□□□ -0.81
DDX56-203ENST00000421223 RTN4RQ9BZR6 473 aa10.02□□□□□ -0.81
DDX56-203ENST00000421223 FGF21Q9NSA1 209 aa10.02□□□□□ -0.81
DDX56-203ENST00000421223 ITGB1BP2Q9UKP3 347 aa10.02□□□□□ -0.81
DDX56-203ENST00000421223 TRAPPC4Q9Y296 219 aa10.02□□□□□ -0.81
DDX56-203ENST00000421223 MED12Q93074 2177 aa10.02□□□□□ -0.81
DDX56-203ENST00000421223 OR6C68A6NDL8 312 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 CCDC182A6NF36 153 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 TVP23AA6NH52 213 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 DUX1O43812 170 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 CDC40O60508 579 aaKnown RBP eCLIP10.01□□□□□ -0.81
DDX56-203ENST00000421223 GABRA4P48169 554 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 SLC37A1P57057 533 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 CTXN1P60606 82 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 ZNF85Q03923 595 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 TOMM34Q15785 309 aaPredicted RBP10.01□□□□□ -0.81
DDX56-203ENST00000421223 BCL2A1Q16548 175 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 C4orf46Q504U0 113 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 C1QL3Q5VWW1 255 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 ZNF527Q8NB42 609 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 DNAJA4Q8WW22 397 aaPredicted RBP10.01□□□□□ -0.81
DDX56-203ENST00000421223 ZNF524Q96C55 264 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 WACQ9BTA9 647 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 RNF32Q9H0A6 362 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 C11orf54Q9H0W9 315 aaPredicted RBP10.01□□□□□ -0.81
DDX56-203ENST00000421223 KCNN2Q9H2S1 579 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 CTSFQ9UBX1 484 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 LRP4O75096 1905 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 A0A087WUJ7 227 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 TFP02787 698 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 TACR3P29371 465 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 FGF9P31371 208 aaPredicted RBP10.01□□□□□ -0.81
DDX56-203ENST00000421223 HOXD12P35452 270 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 PSMD4P55036 377 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms