RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 POLR2HP52434 150 aaKnown RBP14.72□□□□□ -0.05
UPF3AP3-201ENST00000420996 MAP2K6P52564 334 aa14.72□□□□□ -0.05
UPF3AP3-201ENST00000420996 ANXA8L1Q5VT79 327 aa14.72□□□□□ -0.05
UPF3AP3-201ENST00000420996 SAXO2Q658L1 398 aa14.72□□□□□ -0.05
UPF3AP3-201ENST00000420996 PAQR6Q6TCH4 344 aa14.72□□□□□ -0.05
UPF3AP3-201ENST00000420996 IL17RELQ6ZVW7 336 aa14.72□□□□□ -0.05
UPF3AP3-201ENST00000420996 CMIPQ8IY22 773 aa14.72□□□□□ -0.05
UPF3AP3-201ENST00000420996 POMGNT2Q8NAT1 580 aa14.72□□□□□ -0.05
UPF3AP3-201ENST00000420996 CNOT9Q92600 299 aaKnown RBP14.72□□□□□ -0.05
UPF3AP3-201ENST00000420996 FOXN4Q96NZ1 517 aa14.72□□□□□ -0.05
UPF3AP3-201ENST00000420996 SORCS2Q96PQ0 1159 aa14.72□□□□□ -0.05
UPF3AP3-201ENST00000420996 MYOZ1Q9NP98 299 aaPredicted RBP14.72□□□□□ -0.05
UPF3AP3-201ENST00000420996 TMEM72A0PK05 275 aa14.71□□□□□ -0.05
UPF3AP3-201ENST00000420996 PRAMEF27A3QJZ7 478 aa14.71□□□□□ -0.05
UPF3AP3-201ENST00000420996 HAX1O00165 279 aa14.71□□□□□ -0.05
UPF3AP3-201ENST00000420996 AP3D1O14617 1153 aa14.71□□□□□ -0.05
UPF3AP3-201ENST00000420996 SPAG7O75391 227 aa14.71□□□□□ -0.05
UPF3AP3-201ENST00000420996 CPSF4O95639 269 aaKnown RBP14.71□□□□□ -0.05
UPF3AP3-201ENST00000420996 TACR3P29371 465 aa14.71□□□□□ -0.05
UPF3AP3-201ENST00000420996 KHKP50053 298 aa14.71□□□□□ -0.05
UPF3AP3-201ENST00000420996 SNRPD2P62316 118 aaKnown RBP14.71□□□□□ -0.05
UPF3AP3-201ENST00000420996 SRSF2Q01130 221 aaKnown RBP14.71□□□□□ -0.05
UPF3AP3-201ENST00000420996 GPAT3Q53EU6 434 aa14.71□□□□□ -0.05
UPF3AP3-201ENST00000420996 HMGN2P46Q86SG4 172 aa14.71□□□□□ -0.05
UPF3AP3-201ENST00000420996 ANKRD46Q86W74 232 aa14.71□□□□□ -0.05
UPF3AP3-201ENST00000420996 RIBC1Q8N443 379 aaPredicted RBP14.71□□□□□ -0.05
UPF3AP3-201ENST00000420996 ZIC4Q8N9L1 334 aa14.71□□□□□ -0.05
UPF3AP3-201ENST00000420996 VPS37AQ8NEZ2 397 aa14.71□□□□□ -0.05
UPF3AP3-201ENST00000420996 TCP10LQ8TDR4 215 aa14.71□□□□□ -0.05
UPF3AP3-201ENST00000420996 NEURL3Q96EH8 262 aa14.71□□□□□ -0.05
UPF3AP3-201ENST00000420996 SF3B5Q9BWJ5 86 aaKnown RBP14.71□□□□□ -0.05
UPF3AP3-201ENST00000420996 DPY30Q9C005 99 aa14.71□□□□□ -0.05
UPF3AP3-201ENST00000420996 OBP2BQ9NPH6 170 aa14.71□□□□□ -0.05
UPF3AP3-201ENST00000420996 NBEAL1Q6ZS30 2694 aa14.7□□□□□ -0.06
UPF3AP3-201ENST00000420996 IGHV4-61A0A0C4DH41 118 aa14.7□□□□□ -0.06
UPF3AP3-201ENST00000420996 ZC3H12DA2A288 527 aaKnown RBP14.7□□□□□ -0.06
UPF3AP3-201ENST00000420996 FAAHO00519 579 aa14.7□□□□□ -0.06
UPF3AP3-201ENST00000420996 NUDT17P0C025 328 aa14.7□□□□□ -0.06
UPF3AP3-201ENST00000420996 CDH2P19022 906 aaPredicted RBP14.7□□□□□ -0.06
UPF3AP3-201ENST00000420996 PAX7P23759 505 aa14.7□□□□□ -0.06
UPF3AP3-201ENST00000420996 SERPINF1P36955 418 aa14.7□□□□□ -0.06
UPF3AP3-201ENST00000420996 SLC1A3P43003 542 aa14.7□□□□□ -0.06
UPF3AP3-201ENST00000420996 HPCAP84074 193 aa14.7□□□□□ -0.06
UPF3AP3-201ENST00000420996 SQLEQ14534 574 aa14.7□□□□□ -0.06
UPF3AP3-201ENST00000420996 HIKESHIQ53FT3 197 aa14.7□□□□□ -0.06
UPF3AP3-201ENST00000420996 OTUD3Q5T2D3 398 aaPredicted RBP14.7□□□□□ -0.06
UPF3AP3-201ENST00000420996 LIPNQ5VXI9 398 aa14.7□□□□□ -0.06
UPF3AP3-201ENST00000420996 AAED1Q7RTV5 226 aa14.7□□□□□ -0.06
UPF3AP3-201ENST00000420996 ABHD12BQ7Z5M8 362 aaPredicted RBP14.7□□□□□ -0.06
UPF3AP3-201ENST00000420996 ZNF540Q8NDQ6 660 aa14.7□□□□□ -0.06
UPF3AP3-201ENST00000420996 OR9K2Q8NGE7 335 aa14.7□□□□□ -0.06
UPF3AP3-201ENST00000420996 C3orf49Q96BT1 292 aa14.7□□□□□ -0.06
UPF3AP3-201ENST00000420996 VRK1Q99986 396 aaPredicted RBP14.7□□□□□ -0.06
UPF3AP3-201ENST00000420996 PIF1Q9H611 641 aa14.7□□□□□ -0.06
UPF3AP3-201ENST00000420996 AKTIPQ9H8T0 292 aa14.7□□□□□ -0.06
UPF3AP3-201ENST00000420996 CA10Q9NS85 328 aa14.7□□□□□ -0.06
UPF3AP3-201ENST00000420996 MARCOQ9UEW3 520 aaPredicted RBP14.7□□□□□ -0.06
UPF3AP3-201ENST00000420996 IGHV1-18A0A0C4DH31 117 aa14.69□□□□□ -0.06
UPF3AP3-201ENST00000420996 AGAP5A6NIR3 686 aa14.69□□□□□ -0.06
UPF3AP3-201ENST00000420996 HMGN4O00479 90 aa14.69□□□□□ -0.06
UPF3AP3-201ENST00000420996 KLF11O14901 512 aa14.69□□□□□ -0.06
UPF3AP3-201ENST00000420996 TGFAP01135 160 aa14.69□□□□□ -0.06
UPF3AP3-201ENST00000420996 GPIP06744 558 aa14.69□□□□□ -0.06
UPF3AP3-201ENST00000420996 BPGMP07738 259 aa14.69□□□□□ -0.06
UPF3AP3-201ENST00000420996 ZNF23P17027 643 aa14.69□□□□□ -0.06
UPF3AP3-201ENST00000420996 CHI3L1P36222 383 aaPredicted RBP14.69□□□□□ -0.06
UPF3AP3-201ENST00000420996 CASP8Q14790 479 aa14.69□□□□□ -0.06
UPF3AP3-201ENST00000420996 CARTPTQ16568 116 aa14.69□□□□□ -0.06
UPF3AP3-201ENST00000420996 IQCCQ4KMZ1 466 aa14.69□□□□□ -0.06
UPF3AP3-201ENST00000420996 SLC46A3Q7Z3Q1 461 aa14.69□□□□□ -0.06
UPF3AP3-201ENST00000420996 TMEM99Q8N816 258 aa14.69□□□□□ -0.06
UPF3AP3-201ENST00000420996 TESCQ96BS2 214 aa14.69□□□□□ -0.06
UPF3AP3-201ENST00000420996 AURKBQ96GD4 344 aaPredicted RBP14.69□□□□□ -0.06
UPF3AP3-201ENST00000420996 ZNF385AQ96PM9 386 aaKnown RBP14.69□□□□□ -0.06
UPF3AP3-201ENST00000420996 TRNT1Q96Q11 434 aaKnown RBP14.69□□□□□ -0.06
UPF3AP3-201ENST00000420996 SLC38A2Q96QD8 506 aa14.69□□□□□ -0.06
UPF3AP3-201ENST00000420996 KCNS3Q9BQ31 491 aa14.69□□□□□ -0.06
UPF3AP3-201ENST00000420996 KATNB1Q9BVA0 655 aa14.69□□□□□ -0.06
UPF3AP3-201ENST00000420996 ADAM19Q9H013 955 aa14.69□□□□□ -0.06
UPF3AP3-201ENST00000420996 SLC38A1Q9H2H9 487 aa14.69□□□□□ -0.06
UPF3AP3-201ENST00000420996 TMEM45AQ9NWC5 275 aa14.69□□□□□ -0.06
UPF3AP3-201ENST00000420996 B9A039 149 aa14.68□□□□□ -0.06
UPF3AP3-201ENST00000420996 PDE5AO76074 875 aa14.68□□□□□ -0.06
UPF3AP3-201ENST00000420996 AKR7A3O95154 331 aa14.68□□□□□ -0.06
UPF3AP3-201ENST00000420996 CRYAAP02489 173 aa14.68□□□□□ -0.06
UPF3AP3-201ENST00000420996 UQCRBP14927 111 aa14.68□□□□□ -0.06
UPF3AP3-201ENST00000420996 CEACAM7Q14002 265 aa14.68□□□□□ -0.06
UPF3AP3-201ENST00000420996 SYPL1Q16563 259 aa14.68□□□□□ -0.06
UPF3AP3-201ENST00000420996 TBRG1Q3YBR2 411 aa14.68□□□□□ -0.06
UPF3AP3-201ENST00000420996 ANKS4BQ8N8V4 417 aa14.68□□□□□ -0.06
UPF3AP3-201ENST00000420996 ANKFN1Q8N957 763 aa14.68□□□□□ -0.06
UPF3AP3-201ENST00000420996 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.68□□□□□ -0.06
UPF3AP3-201ENST00000420996 SLC35A5Q9BS91 424 aa14.68□□□□□ -0.06
UPF3AP3-201ENST00000420996 MTHFD2LQ9H903 347 aaPredicted RBP14.68□□□□□ -0.06
UPF3AP3-201ENST00000420996 LGALS13Q9UHV8 139 aa14.68□□□□□ -0.06
UPF3AP3-201ENST00000420996 PRDM4Q9UKN5 801 aa14.68□□□□□ -0.06
UPF3AP3-201ENST00000420996 CFAP73A6NFT4 308 aa14.67□□□□□ -0.06
UPF3AP3-201ENST00000420996 LIPT2A6NK58 231 aa14.67□□□□□ -0.06
UPF3AP3-201ENST00000420996 AQP7P3A6NL99 342 aa14.67□□□□□ -0.06
UPF3AP3-201ENST00000420996 KRT33AO76009 404 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms