RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 ALKBH2Q6NS38 261 aa14.56□□□□□ -0.08
LINC00404-201ENST00000418660 KRT73Q86Y46 540 aa14.56□□□□□ -0.08
LINC00404-201ENST00000418660 TSPEARQ8WU66 669 aa14.56□□□□□ -0.08
LINC00404-201ENST00000418660 C3orf49Q96BT1 292 aa14.56□□□□□ -0.08
LINC00404-201ENST00000418660 CPPED1Q9BRF8 314 aaPredicted RBP14.56□□□□□ -0.08
LINC00404-201ENST00000418660 SPATA5L1Q9BVQ7 753 aa14.56□□□□□ -0.08
LINC00404-201ENST00000418660 PRRC2AP48634 2157 aaKnown RBP14.56□□□□□ -0.08
LINC00404-201ENST00000418660 CELSR1Q9NYQ6 3014 aa14.55□□□□□ -0.08
LINC00404-201ENST00000418660 ANGPT2O15123 496 aa14.55□□□□□ -0.08
LINC00404-201ENST00000418660 FRS3O43559 492 aa14.55□□□□□ -0.08
LINC00404-201ENST00000418660 SMPD2O60906 423 aa14.55□□□□□ -0.08
LINC00404-201ENST00000418660 PLAUP00749 431 aa14.55□□□□□ -0.08
LINC00404-201ENST00000418660 SLC6A2P23975 617 aa14.55□□□□□ -0.08
LINC00404-201ENST00000418660 BNIP2Q12982 314 aa14.55□□□□□ -0.08
LINC00404-201ENST00000418660 SCARB2Q14108 478 aa14.55□□□□□ -0.08
LINC00404-201ENST00000418660 CAPRIN1Q14444 709 aaKnown RBP14.55□□□□□ -0.08
LINC00404-201ENST00000418660 SLC17A1Q14916 467 aa14.55□□□□□ -0.08
LINC00404-201ENST00000418660 OR7A5Q15622 319 aa14.55□□□□□ -0.08
LINC00404-201ENST00000418660 OTUD3Q5T2D3 398 aaPredicted RBP14.55□□□□□ -0.08
LINC00404-201ENST00000418660 DHRS4L2Q6PKH6 230 aa14.55□□□□□ -0.08
LINC00404-201ENST00000418660 SSX8Q7RTT4 187 aa14.55□□□□□ -0.08
LINC00404-201ENST00000418660 ATG4DQ86TL0 474 aaPredicted RBP14.55□□□□□ -0.08
LINC00404-201ENST00000418660 P2RY8Q86VZ1 359 aa14.55□□□□□ -0.08
LINC00404-201ENST00000418660 LSRQ86X29 649 aaPredicted RBP14.55□□□□□ -0.08
LINC00404-201ENST00000418660 LRRC75A-AS1Q8N1F1 130 aa14.55□□□□□ -0.08
LINC00404-201ENST00000418660 UBE2J2Q8N2K1 259 aa14.55□□□□□ -0.08
LINC00404-201ENST00000418660 DPP10Q8N608 796 aa14.55□□□□□ -0.08
LINC00404-201ENST00000418660 ZNF433Q8N7K0 673 aaPredicted RBP14.55□□□□□ -0.08
LINC00404-201ENST00000418660 CCL19Q99731 98 aa14.55□□□□□ -0.08
LINC00404-201ENST00000418660 RSPO3Q9BXY4 272 aaPredicted RBP14.55□□□□□ -0.08
LINC00404-201ENST00000418660 ESRP2Q9H6T0 727 aaKnown RBP14.55□□□□□ -0.08
LINC00404-201ENST00000418660 PARPBPQ9NWS1 579 aa14.55□□□□□ -0.08
LINC00404-201ENST00000418660 SLC9A8Q9Y2E8 581 aa14.55□□□□□ -0.08
LINC00404-201ENST00000418660 FLVCR1Q9Y5Y0 555 aa14.55□□□□□ -0.08
LINC00404-201ENST00000418660 TMEM229AB2RXF0 380 aa14.54□□□□□ -0.08
LINC00404-201ENST00000418660 NPIPB7O75200 414 aa14.54□□□□□ -0.08
LINC00404-201ENST00000418660 IGHV3-9P01782 118 aa14.54□□□□□ -0.08
LINC00404-201ENST00000418660 GGT1P19440 569 aa14.54□□□□□ -0.08
LINC00404-201ENST00000418660 ADSLP30566 484 aaPredicted RBP14.54□□□□□ -0.08
LINC00404-201ENST00000418660 NKX6-1P78426 367 aaPredicted RBP14.54□□□□□ -0.08
LINC00404-201ENST00000418660 HOXC5Q00444 222 aa14.54□□□□□ -0.08
LINC00404-201ENST00000418660 FOXD4Q12950 439 aaPredicted RBP14.54□□□□□ -0.08
LINC00404-201ENST00000418660 STK11Q15831 433 aa14.54□□□□□ -0.08
LINC00404-201ENST00000418660 ADRM1Q16186 407 aa14.54□□□□□ -0.08
LINC00404-201ENST00000418660 TIMM23BQ5SRD1 257 aa14.54□□□□□ -0.08
LINC00404-201ENST00000418660 NCMAPQ5T1S8 102 aa14.54□□□□□ -0.08
LINC00404-201ENST00000418660 C1orf140Q5VVS0 124 aa14.54□□□□□ -0.08
LINC00404-201ENST00000418660 SHEQ5VZ18 495 aa14.54□□□□□ -0.08
LINC00404-201ENST00000418660 SEZ6L2Q6UXD5 910 aa14.54□□□□□ -0.08
LINC00404-201ENST00000418660 DHDDSQ86SQ9 333 aa14.54□□□□□ -0.08
LINC00404-201ENST00000418660 TMEM99Q8N816 258 aa14.54□□□□□ -0.08
LINC00404-201ENST00000418660 STK35Q8TDR2 534 aa14.54□□□□□ -0.08
LINC00404-201ENST00000418660 ANKRD27Q96NW4 1050 aa14.54□□□□□ -0.08
LINC00404-201ENST00000418660 ZNF607Q96SK3 696 aa14.54□□□□□ -0.08
LINC00404-201ENST00000418660 SF3B5Q9BWJ5 86 aaKnown RBP14.54□□□□□ -0.08
LINC00404-201ENST00000418660 TAPBPLQ9BX59 468 aa14.54□□□□□ -0.08
LINC00404-201ENST00000418660 PIF1Q9H611 641 aa14.54□□□□□ -0.08
LINC00404-201ENST00000418660 ZNF446Q9NWS9 450 aa14.54□□□□□ -0.08
LINC00404-201ENST00000418660 ASB6Q9NWX5 421 aa14.54□□□□□ -0.08
LINC00404-201ENST00000418660 MALT1Q9UDY8 824 aa14.54□□□□□ -0.08
LINC00404-201ENST00000418660 ITPR3Q14573 2671 aa14.53□□□□□ -0.08
LINC00404-201ENST00000418660 PRORSD1PA6NEY8 169 aa14.53□□□□□ -0.08
LINC00404-201ENST00000418660 OR5H1A6NKK0 313 aa14.53□□□□□ -0.08
LINC00404-201ENST00000418660 AQP7P3A6NL99 342 aa14.53□□□□□ -0.08
LINC00404-201ENST00000418660 HS3ST1O14792 307 aa14.53□□□□□ -0.08
LINC00404-201ENST00000418660 ARHGEF9O43307 516 aa14.53□□□□□ -0.08
LINC00404-201ENST00000418660 AKR7A3O95154 331 aa14.53□□□□□ -0.08
LINC00404-201ENST00000418660 CD3EP07766 207 aa14.53□□□□□ -0.08
LINC00404-201ENST00000418660 PPA1Q15181 289 aa14.53□□□□□ -0.08
LINC00404-201ENST00000418660 ADAM5Q6NVV9 412 aa14.53□□□□□ -0.08
LINC00404-201ENST00000418660 CASP12Q6UXS9 341 aa14.53□□□□□ -0.08
LINC00404-201ENST00000418660 RETREG3Q86VR2 466 aa14.53□□□□□ -0.08
LINC00404-201ENST00000418660 KRTAP1-3Q8IUG1 177 aa14.53□□□□□ -0.08
LINC00404-201ENST00000418660 ZNF611Q8N823 705 aa14.53□□□□□ -0.08
LINC00404-201ENST00000418660 LSMEM1Q8N8F7 131 aa14.53□□□□□ -0.08
LINC00404-201ENST00000418660 HIPK4Q8NE63 616 aa14.53□□□□□ -0.08
LINC00404-201ENST00000418660 WFDC11Q8NEX6 87 aa14.53□□□□□ -0.08
LINC00404-201ENST00000418660 BHLHE22Q8NFJ8 381 aaPredicted RBP14.53□□□□□ -0.08
LINC00404-201ENST00000418660 TMEM45BQ96B21 275 aa14.53□□□□□ -0.08
LINC00404-201ENST00000418660 MUCL1Q96DR8 90 aa14.53□□□□□ -0.08
LINC00404-201ENST00000418660 CGREF1Q99674 301 aa14.53□□□□□ -0.08
LINC00404-201ENST00000418660 TMEM120AQ9BXJ8 343 aa14.53□□□□□ -0.08
LINC00404-201ENST00000418660 C12orf10Q9HB07 376 aa14.53□□□□□ -0.08
LINC00404-201ENST00000418660 TAS2R16Q9NYV7 291 aa14.53□□□□□ -0.08
LINC00404-201ENST00000418660 RPS6KB2Q9UBS0 482 aa14.53□□□□□ -0.08
LINC00404-201ENST00000418660 RNF115Q9Y4L5 304 aa14.53□□□□□ -0.08
LINC00404-201ENST00000418660 FREM1Q5H8C1 2179 aa14.53□□□□□ -0.08
LINC00404-201ENST00000418660 RAI1Q7Z5J4 1906 aaPredicted RBP14.53□□□□□ -0.08
LINC00404-201ENST00000418660 MED13LQ71F56 2210 aa14.52□□□□□ -0.08
LINC00404-201ENST00000418660 CIB4A0PJX0 185 aa14.52□□□□□ -0.09
LINC00404-201ENST00000418660 CCT8L1PA6NM43 557 aa14.52□□□□□ -0.09
LINC00404-201ENST00000418660 TPST1O60507 370 aa14.52□□□□□ -0.09
LINC00404-201ENST00000418660 SERPINB7O75635 380 aa14.52□□□□□ -0.09
LINC00404-201ENST00000418660 VAMP5O95183 116 aa14.52□□□□□ -0.09
LINC00404-201ENST00000418660 AHSA1O95433 338 aa14.52□□□□□ -0.09
LINC00404-201ENST00000418660 TROVE2P10155 538 aaKnown RBP eCLIP14.52□□□□□ -0.09
LINC00404-201ENST00000418660 FOSL1P15407 271 aa14.52□□□□□ -0.09
LINC00404-201ENST00000418660 RBBP4Q09028 425 aa14.52□□□□□ -0.09
LINC00404-201ENST00000418660 FAPQ12884 760 aa14.52□□□□□ -0.09
LINC00404-201ENST00000418660 NFYCQ13952 458 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms