RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 A0A1W2PP18 115 aa22.34■■□□□ 1.17
VEGFA-208ENST00000417285 CIB4A0PJX0 185 aa22.34■■□□□ 1.17
VEGFA-208ENST00000417285 CDHR4A6H8M9 788 aa22.34■■□□□ 1.17
VEGFA-208ENST00000417285 CCT8L1PA6NM43 557 aa22.34■■□□□ 1.17
VEGFA-208ENST00000417285 SOD3P08294 240 aa22.34■■□□□ 1.17
VEGFA-208ENST00000417285 IDH3AP50213 366 aa22.34■■□□□ 1.17
VEGFA-208ENST00000417285 LARS2Q15031 903 aaKnown RBP22.34■■□□□ 1.17
VEGFA-208ENST00000417285 SLC2A7Q6PXP3 512 aa22.34■■□□□ 1.17
VEGFA-208ENST00000417285 VRK2Q86Y07 508 aa22.34■■□□□ 1.17
VEGFA-208ENST00000417285 DNAJA3Q96EY1 480 aa22.34■■□□□ 1.17
VEGFA-208ENST00000417285 TMEM19Q96HH6 336 aa22.34■■□□□ 1.17
VEGFA-208ENST00000417285 GRIP2Q9C0E4 1043 aa22.34■■□□□ 1.17
VEGFA-208ENST00000417285 PAIP1Q9H074 479 aaKnown RBP22.34■■□□□ 1.17
VEGFA-208ENST00000417285 ARMC7Q9H6L4 198 aa22.34■■□□□ 1.17
VEGFA-208ENST00000417285 FAIMQ9NVQ4 179 aa22.34■■□□□ 1.17
VEGFA-208ENST00000417285 RLIMQ9NVW2 624 aa22.34■■□□□ 1.17
VEGFA-208ENST00000417285 MALT1Q9UDY8 824 aa22.34■■□□□ 1.17
VEGFA-208ENST00000417285 ZNF443Q9Y2A4 671 aaPredicted RBP22.34■■□□□ 1.17
VEGFA-208ENST00000417285 A0A0G2JPF8 293 aa22.33■■□□□ 1.17
VEGFA-208ENST00000417285 TMEM72A0PK05 275 aa22.33■■□□□ 1.17
VEGFA-208ENST00000417285 HNRNPCL2B2RXH8 293 aa22.33■■□□□ 1.17
VEGFA-208ENST00000417285 HNRNPCL3B7ZW38 293 aa22.33■■□□□ 1.17
VEGFA-208ENST00000417285 HNRNPCL1O60812 293 aaKnown RBP22.33■■□□□ 1.17
VEGFA-208ENST00000417285 THBS1P07996 1170 aa22.33■■□□□ 1.17
VEGFA-208ENST00000417285 HNRNPCL4P0DMR1 293 aa22.33■■□□□ 1.17
VEGFA-208ENST00000417285 CXCR1P25024 350 aa22.33■■□□□ 1.17
VEGFA-208ENST00000417285 IDUAP35475 653 aa22.33■■□□□ 1.17
VEGFA-208ENST00000417285 FADDQ13158 208 aa22.33■■□□□ 1.17
VEGFA-208ENST00000417285 RNF220Q5VTB9 566 aa22.33■■□□□ 1.17
VEGFA-208ENST00000417285 TMEM108Q6UXF1 575 aa22.33■■□□□ 1.17
VEGFA-208ENST00000417285 ZNF836Q6ZNA1 936 aa22.33■■□□□ 1.17
VEGFA-208ENST00000417285 HDXQ7Z353 690 aa22.33■■□□□ 1.17
VEGFA-208ENST00000417285 MUS81Q96NY9 551 aa22.33■■□□□ 1.17
VEGFA-208ENST00000417285 EBF4Q9BQW3 602 aa22.33■■□□□ 1.17
VEGFA-208ENST00000417285 ARGLU1Q9NWB6 273 aaPredicted RBP22.33■■□□□ 1.17
VEGFA-208ENST00000417285 TAS2R16Q9NYV7 291 aa22.33■■□□□ 1.17
VEGFA-208ENST00000417285 CISD1Q9NZ45 108 aaKnown RBP22.33■■□□□ 1.17
VEGFA-208ENST00000417285 MGAT4BQ9UQ53 548 aa22.33■■□□□ 1.17
VEGFA-208ENST00000417285 SLC9A8Q9Y2E8 581 aa22.33■■□□□ 1.17
VEGFA-208ENST00000417285 FN1P02751 2386 aaKnown RBP22.33■■□□□ 1.16
VEGFA-208ENST00000417285 A0A096LPI6 279 aa22.32■■□□□ 1.16
VEGFA-208ENST00000417285 HMGB1P1B2RPK0 211 aaPredicted RBP22.32■■□□□ 1.16
VEGFA-208ENST00000417285 CLIC1O00299 241 aa22.32■■□□□ 1.16
VEGFA-208ENST00000417285 IGHV3-9P01782 118 aa22.32■■□□□ 1.16
VEGFA-208ENST00000417285 NTF4P34130 210 aa22.32■■□□□ 1.16
VEGFA-208ENST00000417285 AQP5P55064 265 aa22.32■■□□□ 1.16
VEGFA-208ENST00000417285 COPZ1P61923 177 aa22.32■■□□□ 1.16
VEGFA-208ENST00000417285 RGNQ15493 299 aa22.32■■□□□ 1.16
VEGFA-208ENST00000417285 C1QTNF12Q5T7M4 302 aa22.32■■□□□ 1.16
VEGFA-208ENST00000417285 PAQR6Q6TCH4 344 aa22.32■■□□□ 1.16
VEGFA-208ENST00000417285 KLHL17Q6TDP4 642 aa22.32■■□□□ 1.16
VEGFA-208ENST00000417285 ATG4DQ86TL0 474 aaPredicted RBP22.32■■□□□ 1.16
VEGFA-208ENST00000417285 KBTBD8Q8NFY9 601 aa22.32■■□□□ 1.16
VEGFA-208ENST00000417285 NEUROG1Q92886 237 aa22.32■■□□□ 1.16
VEGFA-208ENST00000417285 INTS9Q9NV88 658 aaKnown RBP22.32■■□□□ 1.16
VEGFA-208ENST00000417285 IFT52Q9Y366 437 aa22.32■■□□□ 1.16
VEGFA-208ENST00000417285 GPIP06744 558 aa22.31■■□□□ 1.16
VEGFA-208ENST00000417285 GKN3PP0CG01 181 aa22.31■■□□□ 1.16
VEGFA-208ENST00000417285 IMPDH2P12268 514 aa22.31■■□□□ 1.16
VEGFA-208ENST00000417285 IRX1P78414 480 aaPredicted RBP22.31■■□□□ 1.16
VEGFA-208ENST00000417285 FAPQ12884 760 aa22.31■■□□□ 1.16
VEGFA-208ENST00000417285 SLC17A1Q14916 467 aa22.31■■□□□ 1.16
VEGFA-208ENST00000417285 PGGHGQ32M88 737 aa22.31■■□□□ 1.16
VEGFA-208ENST00000417285 RPS26P11Q5JNZ5 115 aaPredicted RBP22.31■■□□□ 1.16
VEGFA-208ENST00000417285 PRAMEF8Q5VWM4 474 aa22.31■■□□□ 1.16
VEGFA-208ENST00000417285 PRAMEF7Q5VXH5 474 aa22.31■■□□□ 1.16
VEGFA-208ENST00000417285 BLOC1S3Q6QNY0 202 aa22.31■■□□□ 1.16
VEGFA-208ENST00000417285 SPDL1Q96EA4 605 aa22.31■■□□□ 1.16
VEGFA-208ENST00000417285 SPATA9Q9BWV2 254 aa22.31■■□□□ 1.16
VEGFA-208ENST00000417285 PIF1Q9H611 641 aa22.31■■□□□ 1.16
VEGFA-208ENST00000417285 A4GALTQ9NPC4 353 aa22.31■■□□□ 1.16
VEGFA-208ENST00000417285 CCDC167Q9P0B6 97 aa22.31■■□□□ 1.16
VEGFA-208ENST00000417285 MAGED1Q9Y5V3 778 aaPredicted RBP22.31■■□□□ 1.16
VEGFA-208ENST00000417285 SHISA9B4DS77 424 aa22.3■■□□□ 1.16
VEGFA-208ENST00000417285 NR5A2O00482 541 aa22.3■■□□□ 1.16
VEGFA-208ENST00000417285 ABCD4O14678 606 aa22.3■■□□□ 1.16
VEGFA-208ENST00000417285 RAMP1O60894 148 aa22.3■■□□□ 1.16
VEGFA-208ENST00000417285 RAD51DO75771 328 aa22.3■■□□□ 1.16
VEGFA-208ENST00000417285 PTAFRP25105 342 aa22.3■■□□□ 1.16
VEGFA-208ENST00000417285 ACAA2P42765 397 aaKnown RBP22.3■■□□□ 1.16
VEGFA-208ENST00000417285 CLEC12BQ2HXU8 276 aa22.3■■□□□ 1.16
VEGFA-208ENST00000417285 WBP2NLQ6ICG8 309 aa22.3■■□□□ 1.16
VEGFA-208ENST00000417285 FUNDC1Q8IVP5 155 aa22.3■■□□□ 1.16
VEGFA-208ENST00000417285 SF3B5Q9BWJ5 86 aaKnown RBP22.3■■□□□ 1.16
VEGFA-208ENST00000417285 ALG2Q9H553 416 aa22.3■■□□□ 1.16
VEGFA-208ENST00000417285 VIPAS39Q9H9C1 493 aa22.3■■□□□ 1.16
VEGFA-208ENST00000417285 BCL2L10Q9HD36 194 aa22.3■■□□□ 1.16
VEGFA-208ENST00000417285 TMEM45AQ9NWC5 275 aa22.3■■□□□ 1.16
VEGFA-208ENST00000417285 UPB1Q9UBR1 384 aa22.3■■□□□ 1.16
VEGFA-208ENST00000417285 FLVCR1Q9Y5Y0 555 aa22.3■■□□□ 1.16
VEGFA-208ENST00000417285 SLC25A15Q9Y619 301 aa22.3■■□□□ 1.16
VEGFA-208ENST00000417285 C5orf58C9J3I9 102 aa22.29■■□□□ 1.16
VEGFA-208ENST00000417285 BMP2P12643 396 aa22.29■■□□□ 1.16
VEGFA-208ENST00000417285 HOXB9P17482 250 aaPredicted RBP22.29■■□□□ 1.16
VEGFA-208ENST00000417285 NCF2P19878 526 aaPredicted RBP22.29■■□□□ 1.16
VEGFA-208ENST00000417285 TGFBR3Q03167 851 aa22.29■■□□□ 1.16
VEGFA-208ENST00000417285 TNK1Q13470 666 aa22.29■■□□□ 1.16
VEGFA-208ENST00000417285 GABRA6Q16445 453 aa22.29■■□□□ 1.16
VEGFA-208ENST00000417285 LRIF1Q5T3J3 769 aa22.29■■□□□ 1.16
VEGFA-208ENST00000417285 CASP12Q6UXS9 341 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms