RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 C3orf49Q96BT1 292 aa13.82□□□□□ -0.2
ITGB1-204ENST00000417122 CPPED1Q9BRF8 314 aaPredicted RBP13.82□□□□□ -0.2
ITGB1-204ENST00000417122 SPATA5L1Q9BVQ7 753 aa13.82□□□□□ -0.2
ITGB1-204ENST00000417122 TMEM38AQ9H6F2 299 aa13.82□□□□□ -0.2
ITGB1-204ENST00000417122 F8P00451 2351 aa13.81□□□□□ -0.2
ITGB1-204ENST00000417122 LIPT2A6NK58 231 aa13.81□□□□□ -0.2
ITGB1-204ENST00000417122 PLAUP00749 431 aa13.81□□□□□ -0.2
ITGB1-204ENST00000417122 IGHV3-9P01782 118 aa13.81□□□□□ -0.2
ITGB1-204ENST00000417122 CD99P14209 185 aa13.81□□□□□ -0.2
ITGB1-204ENST00000417122 COX5AP20674 150 aa13.81□□□□□ -0.2
ITGB1-204ENST00000417122 SLC6A2P23975 617 aa13.81□□□□□ -0.2
ITGB1-204ENST00000417122 NTF4P34130 210 aa13.81□□□□□ -0.2
ITGB1-204ENST00000417122 ADAM8P78325 824 aa13.81□□□□□ -0.2
ITGB1-204ENST00000417122 HOXC5Q00444 222 aa13.81□□□□□ -0.2
ITGB1-204ENST00000417122 CAPRIN1Q14444 709 aaKnown RBP13.81□□□□□ -0.2
ITGB1-204ENST00000417122 SLC17A1Q14916 467 aa13.81□□□□□ -0.2
ITGB1-204ENST00000417122 OTUD3Q5T2D3 398 aaPredicted RBP13.81□□□□□ -0.2
ITGB1-204ENST00000417122 ZNF704Q6ZNC4 412 aaPredicted RBP13.81□□□□□ -0.2
ITGB1-204ENST00000417122 C20orf204Q6ZNR8 217 aa13.81□□□□□ -0.2
ITGB1-204ENST00000417122 ATG4DQ86TL0 474 aaPredicted RBP13.81□□□□□ -0.2
ITGB1-204ENST00000417122 DPP10Q8N608 796 aa13.81□□□□□ -0.2
ITGB1-204ENST00000417122 TSPEARQ8WU66 669 aa13.81□□□□□ -0.2
ITGB1-204ENST00000417122 CCL19Q99731 98 aa13.81□□□□□ -0.2
ITGB1-204ENST00000417122 PIP5K1AQ99755 562 aa13.81□□□□□ -0.2
ITGB1-204ENST00000417122 TMUB1Q9BVT8 246 aa13.81□□□□□ -0.2
ITGB1-204ENST00000417122 TAPBPLQ9BX59 468 aa13.81□□□□□ -0.2
ITGB1-204ENST00000417122 TMEM120AQ9BXJ8 343 aa13.81□□□□□ -0.2
ITGB1-204ENST00000417122 RSPO3Q9BXY4 272 aaPredicted RBP13.81□□□□□ -0.2
ITGB1-204ENST00000417122 NGBQ9NPG2 151 aa13.81□□□□□ -0.2
ITGB1-204ENST00000417122 ZNF446Q9NWS9 450 aa13.81□□□□□ -0.2
ITGB1-204ENST00000417122 SLC9A8Q9Y2E8 581 aa13.81□□□□□ -0.2
ITGB1-204ENST00000417122 FLVCR1Q9Y5Y0 555 aa13.81□□□□□ -0.2
ITGB1-204ENST00000417122 CELSR1Q9NYQ6 3014 aa13.8□□□□□ -0.2
ITGB1-204ENST00000417122 TMEM229AB2RXF0 380 aa13.8□□□□□ -0.2
ITGB1-204ENST00000417122 AKR7A3O95154 331 aa13.8□□□□□ -0.2
ITGB1-204ENST00000417122 TROVE2P10155 538 aaKnown RBP eCLIP13.8□□□□□ -0.2
ITGB1-204ENST00000417122 GGT1P19440 569 aa13.8□□□□□ -0.2
ITGB1-204ENST00000417122 ADSLP30566 484 aaPredicted RBP13.8□□□□□ -0.2
ITGB1-204ENST00000417122 STK11Q15831 433 aa13.8□□□□□ -0.2
ITGB1-204ENST00000417122 ADRM1Q16186 407 aa13.8□□□□□ -0.2
ITGB1-204ENST00000417122 NCMAPQ5T1S8 102 aa13.8□□□□□ -0.2
ITGB1-204ENST00000417122 C1orf140Q5VVS0 124 aa13.8□□□□□ -0.2
ITGB1-204ENST00000417122 DHRS4L2Q6PKH6 230 aa13.8□□□□□ -0.2
ITGB1-204ENST00000417122 RETREG3Q86VR2 466 aa13.8□□□□□ -0.2
ITGB1-204ENST00000417122 ZNF433Q8N7K0 673 aaPredicted RBP13.8□□□□□ -0.2
ITGB1-204ENST00000417122 TMEM99Q8N816 258 aa13.8□□□□□ -0.2
ITGB1-204ENST00000417122 HIPK4Q8NE63 616 aa13.8□□□□□ -0.2
ITGB1-204ENST00000417122 STK35Q8TDR2 534 aa13.8□□□□□ -0.2
ITGB1-204ENST00000417122 ANKRD27Q96NW4 1050 aa13.8□□□□□ -0.2
ITGB1-204ENST00000417122 ZNF607Q96SK3 696 aa13.8□□□□□ -0.2
ITGB1-204ENST00000417122 CGREF1Q99674 301 aa13.8□□□□□ -0.2
ITGB1-204ENST00000417122 TMEM204Q9BSN7 226 aa13.8□□□□□ -0.2
ITGB1-204ENST00000417122 SF3B5Q9BWJ5 86 aaKnown RBP13.8□□□□□ -0.2
ITGB1-204ENST00000417122 ESRP2Q9H6T0 727 aaKnown RBP13.8□□□□□ -0.2
ITGB1-204ENST00000417122 PARPBPQ9NWS1 579 aa13.8□□□□□ -0.2
ITGB1-204ENST00000417122 ASB6Q9NWX5 421 aa13.8□□□□□ -0.2
ITGB1-204ENST00000417122 RPS6KB2Q9UBS0 482 aa13.8□□□□□ -0.2
ITGB1-204ENST00000417122 PRORSD1PA6NEY8 169 aa13.79□□□□□ -0.2
ITGB1-204ENST00000417122 AQP7P3A6NL99 342 aa13.79□□□□□ -0.2
ITGB1-204ENST00000417122 TPST1O60507 370 aa13.79□□□□□ -0.2
ITGB1-204ENST00000417122 SMPD2O60906 423 aa13.79□□□□□ -0.2
ITGB1-204ENST00000417122 NPIPB7O75200 414 aa13.79□□□□□ -0.2
ITGB1-204ENST00000417122 AQP1P29972 269 aa13.79□□□□□ -0.2
ITGB1-204ENST00000417122 HOXC12P31275 282 aa13.79□□□□□ -0.2
ITGB1-204ENST00000417122 NKX6-1P78426 367 aaPredicted RBP13.79□□□□□ -0.2
ITGB1-204ENST00000417122 FAPQ12884 760 aa13.79□□□□□ -0.2
ITGB1-204ENST00000417122 FOXD4Q12950 439 aaPredicted RBP13.79□□□□□ -0.2
ITGB1-204ENST00000417122 NFYCQ13952 458 aa13.79□□□□□ -0.2
ITGB1-204ENST00000417122 PPA1Q15181 289 aa13.79□□□□□ -0.2
ITGB1-204ENST00000417122 GLIPR1L2Q4G1C9 344 aa13.79□□□□□ -0.2
ITGB1-204ENST00000417122 TIMM23BQ5SRD1 257 aa13.79□□□□□ -0.2
ITGB1-204ENST00000417122 CASP12Q6UXS9 341 aa13.79□□□□□ -0.2
ITGB1-204ENST00000417122 COMTD1Q86VU5 262 aa13.79□□□□□ -0.2
ITGB1-204ENST00000417122 ADPRHL2Q9NX46 363 aa13.79□□□□□ -0.2
ITGB1-204ENST00000417122 MALT1Q9UDY8 824 aa13.79□□□□□ -0.2
ITGB1-204ENST00000417122 ANGPT4Q9Y264 503 aa13.79□□□□□ -0.2
ITGB1-204ENST00000417122 DSCAMO60469 2012 aa13.79□□□□□ -0.2
ITGB1-204ENST00000417122 PRR14LQ5THK1 2151 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 CIB4A0PJX0 185 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 OR5H1A6NKK0 313 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 ELOA3DA6NLF2 546 aaPredicted RBP13.78□□□□□ -0.2
ITGB1-204ENST00000417122 CCT8L1PA6NM43 557 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 HS3ST1O14792 307 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 SERPINB7O75635 380 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 RAD51DO75771 328 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 CD3EP07766 207 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 ARFIP2P53365 341 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 MTPNP58546 118 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 SELPLGQ14242 412 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 CYP51A1Q16850 503 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 ELOA3BQ3SY89 546 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 TMEM225Q6GV28 225 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 SEZ6L2Q6UXD5 910 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 SSX8Q7RTT4 187 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 GPAT4Q86UL3 456 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 P2RY8Q86VZ1 359 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 PTOV1Q86YD1 416 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 ARMC8Q8IUR7 673 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 LRRC75A-AS1Q8N1F1 130 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 LSMEM1Q8N8F7 131 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms