RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 ZC3H12DA2A288 527 aaKnown RBP12.98□□□□□ -0.33
RPS28-201ENST00000417088 E9PBE3 544 aa12.98□□□□□ -0.33
RPS28-201ENST00000417088 FAAHO00519 579 aa12.98□□□□□ -0.33
RPS28-201ENST00000417088 BIRC5O15392 142 aa12.98□□□□□ -0.33
RPS28-201ENST00000417088 CHRM4P08173 479 aa12.98□□□□□ -0.33
RPS28-201ENST00000417088 SLC1A3P43003 542 aa12.98□□□□□ -0.33
RPS28-201ENST00000417088 SLC1A6P48664 564 aa12.98□□□□□ -0.33
RPS28-201ENST00000417088 VLDLRP98155 873 aa12.98□□□□□ -0.33
RPS28-201ENST00000417088 LRRC74BQ6ZQY2 392 aa12.98□□□□□ -0.33
RPS28-201ENST00000417088 LRRC34Q8IZ02 419 aa12.98□□□□□ -0.33
RPS28-201ENST00000417088 C1orf162Q8NEQ5 155 aaPredicted RBP12.98□□□□□ -0.33
RPS28-201ENST00000417088 NANOS1Q8WY41 292 aaKnown RBP12.98□□□□□ -0.33
RPS28-201ENST00000417088 MANSC1Q9H8J5 431 aa12.98□□□□□ -0.33
RPS28-201ENST00000417088 FKRPQ9H9S5 495 aa12.98□□□□□ -0.33
RPS28-201ENST00000417088 HAO1Q9UJM8 370 aa12.98□□□□□ -0.33
RPS28-201ENST00000417088 AMDHD2Q9Y303 409 aa12.98□□□□□ -0.33
RPS28-201ENST00000417088 CCDC154A6NI56 674 aa12.97□□□□□ -0.33
RPS28-201ENST00000417088 SNUPNO95149 360 aaKnown RBP12.97□□□□□ -0.33
RPS28-201ENST00000417088 FAM157CP0CG43 387 aa12.97□□□□□ -0.33
RPS28-201ENST00000417088 SLC25A16P16260 332 aa12.97□□□□□ -0.33
RPS28-201ENST00000417088 RPS4Y1P22090 263 aaKnown RBP12.97□□□□□ -0.33
RPS28-201ENST00000417088 CDKN2CP42773 168 aa12.97□□□□□ -0.33
RPS28-201ENST00000417088 MAP2K6P52564 334 aa12.97□□□□□ -0.33
RPS28-201ENST00000417088 NME5P56597 212 aa12.97□□□□□ -0.33
RPS28-201ENST00000417088 UFM1P61960 85 aa12.97□□□□□ -0.33
RPS28-201ENST00000417088 EPS8Q12929 822 aa12.97□□□□□ -0.33
RPS28-201ENST00000417088 PAQR6Q6TCH4 344 aa12.97□□□□□ -0.33
RPS28-201ENST00000417088 C10orf105Q8TEF2 133 aa12.97□□□□□ -0.33
RPS28-201ENST00000417088 TMEM158Q8WZ71 300 aa12.97□□□□□ -0.33
RPS28-201ENST00000417088 FAM168AQ92567 244 aa12.97□□□□□ -0.33
RPS28-201ENST00000417088 ADAM19Q9H013 955 aa12.97□□□□□ -0.33
RPS28-201ENST00000417088 MTHFD2LQ9H903 347 aaPredicted RBP12.97□□□□□ -0.33
RPS28-201ENST00000417088 CDC42EP3Q9UKI2 254 aa12.97□□□□□ -0.33
RPS28-201ENST00000417088 YLPM1P49750 1951 aaKnown RBP12.97□□□□□ -0.33
RPS28-201ENST00000417088 CFAP73A6NFT4 308 aa12.96□□□□□ -0.33
RPS28-201ENST00000417088 ATP6V1G2-DDX39BF2Z307 99 aa12.96□□□□□ -0.33
RPS28-201ENST00000417088 ALDOCP09972 364 aaKnown RBP12.96□□□□□ -0.33
RPS28-201ENST00000417088 IL7RP16871 459 aa12.96□□□□□ -0.33
RPS28-201ENST00000417088 BGNP21810 368 aa12.96□□□□□ -0.33
RPS28-201ENST00000417088 MPGP29372 298 aa12.96□□□□□ -0.33
RPS28-201ENST00000417088 IL12AP29459 219 aa12.96□□□□□ -0.33
RPS28-201ENST00000417088 APOBEC3AP31941 199 aaPredicted RBP12.96□□□□□ -0.33
RPS28-201ENST00000417088 EFNA4P52798 201 aa12.96□□□□□ -0.33
RPS28-201ENST00000417088 TGFBR3Q03167 851 aa12.96□□□□□ -0.33
RPS28-201ENST00000417088 CHRNB3Q05901 458 aa12.96□□□□□ -0.33
RPS28-201ENST00000417088 KRT71Q3SY84 523 aa12.96□□□□□ -0.33
RPS28-201ENST00000417088 COX20Q5RI15 118 aa12.96□□□□□ -0.33
RPS28-201ENST00000417088 OTUD3Q5T2D3 398 aaPredicted RBP12.96□□□□□ -0.33
RPS28-201ENST00000417088 MRPL2Q5T653 305 aaKnown RBP12.96□□□□□ -0.33
RPS28-201ENST00000417088 C1QTNF12Q5T7M4 302 aa12.96□□□□□ -0.33
RPS28-201ENST00000417088 OGFOD2Q6N063 350 aa12.96□□□□□ -0.33
RPS28-201ENST00000417088 ZNF621Q6ZSS3 439 aa12.96□□□□□ -0.33
RPS28-201ENST00000417088 TMEM99Q8N816 258 aa12.96□□□□□ -0.33
RPS28-201ENST00000417088 ZIC4Q8N9L1 334 aa12.96□□□□□ -0.33
RPS28-201ENST00000417088 WDR60Q8WVS4 1066 aa12.96□□□□□ -0.33
RPS28-201ENST00000417088 TMEM45BQ96B21 275 aa12.96□□□□□ -0.33
RPS28-201ENST00000417088 ZNF385AQ96PM9 386 aaKnown RBP12.96□□□□□ -0.33
RPS28-201ENST00000417088 PANX1Q96RD7 426 aa12.96□□□□□ -0.33
RPS28-201ENST00000417088 KCNK17Q96T54 332 aa12.96□□□□□ -0.33
RPS28-201ENST00000417088 MEAF6Q9HAF1 191 aa12.96□□□□□ -0.33
RPS28-201ENST00000417088 SSU72Q9NP77 194 aaKnown RBP12.96□□□□□ -0.33
RPS28-201ENST00000417088 PNPOQ9NVS9 261 aa12.96□□□□□ -0.33
RPS28-201ENST00000417088 AIG1Q9NVV5 245 aa12.96□□□□□ -0.33
RPS28-201ENST00000417088 TMEM160Q9NX00 188 aa12.96□□□□□ -0.33
RPS28-201ENST00000417088 LIPT2A6NK58 231 aa12.95□□□□□ -0.34
RPS28-201ENST00000417088 TM9SF1O15321 606 aa12.95□□□□□ -0.34
RPS28-201ENST00000417088 RGS16O15492 202 aaPredicted RBP12.95□□□□□ -0.34
RPS28-201ENST00000417088 LY6HO94772 140 aa12.95□□□□□ -0.34
RPS28-201ENST00000417088 AKR7A3O95154 331 aa12.95□□□□□ -0.34
RPS28-201ENST00000417088 GSNP06396 782 aa12.95□□□□□ -0.34
RPS28-201ENST00000417088 DBIP07108 87 aaKnown RBP12.95□□□□□ -0.34
RPS28-201ENST00000417088 IGHV4-31P0DP07 118 aa12.95□□□□□ -0.34
RPS28-201ENST00000417088 NR2F1P10589 423 aa12.95□□□□□ -0.34
RPS28-201ENST00000417088 BMP4P12644 408 aa12.95□□□□□ -0.34
RPS28-201ENST00000417088 ANXA11P50995 505 aaKnown RBP12.95□□□□□ -0.34
RPS28-201ENST00000417088 PRPS1P60891 318 aa12.95□□□□□ -0.34
RPS28-201ENST00000417088 TXNL4AP83876 142 aaKnown RBP12.95□□□□□ -0.34
RPS28-201ENST00000417088 CEACAM7Q14002 265 aa12.95□□□□□ -0.34
RPS28-201ENST00000417088 MPP2Q14168 576 aa12.95□□□□□ -0.34
RPS28-201ENST00000417088 GNA13Q14344 377 aa12.95□□□□□ -0.34
RPS28-201ENST00000417088 OR7A5Q15622 319 aa12.95□□□□□ -0.34
RPS28-201ENST00000417088 MAPK11Q15759 364 aa12.95□□□□□ -0.34
RPS28-201ENST00000417088 GSTA3Q16772 222 aa12.95□□□□□ -0.34
RPS28-201ENST00000417088 MST1LQ2TV78 715 aa12.95□□□□□ -0.34
RPS28-201ENST00000417088 AAED1Q7RTV5 226 aa12.95□□□□□ -0.34
RPS28-201ENST00000417088 KIRREL3Q8IZU9 778 aa12.95□□□□□ -0.34
RPS28-201ENST00000417088 TRIML2Q8N7C3 387 aa12.95□□□□□ -0.34
RPS28-201ENST00000417088 OR9K2Q8NGE7 335 aa12.95□□□□□ -0.34
RPS28-201ENST00000417088 PNPT1Q8TCS8 783 aaKnown RBP12.95□□□□□ -0.34
RPS28-201ENST00000417088 PROX1Q92786 737 aa12.95□□□□□ -0.34
RPS28-201ENST00000417088 TRIM44Q96DX7 344 aaPredicted RBP12.95□□□□□ -0.34
RPS28-201ENST00000417088 BOD1Q96IK1 185 aa12.95□□□□□ -0.34
RPS28-201ENST00000417088 OR52E6Q96RD3 313 aa12.95□□□□□ -0.34
RPS28-201ENST00000417088 SF3B5Q9BWJ5 86 aaKnown RBP12.95□□□□□ -0.34
RPS28-201ENST00000417088 RLIMQ9NVW2 624 aa12.95□□□□□ -0.34
RPS28-201ENST00000417088 MOKQ9UQ07 419 aa12.95□□□□□ -0.34
RPS28-201ENST00000417088 PMF1-BGLAPU3KQ54 211 aa12.95□□□□□ -0.34
RPS28-201ENST00000417088 ARFGEF3Q5TH69 2177 aa12.95□□□□□ -0.34
RPS28-201ENST00000417088 AQP7P3A6NL99 342 aa12.94□□□□□ -0.34
RPS28-201ENST00000417088 SDHDO14521 159 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms