RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 HLA-GP17693 338 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 COILP38432 576 aaPredicted RBP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 EIF2S3P41091 472 aaKnown RBP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 PRLHRP49683 370 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 DAP3P51398 398 aaKnown RBP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 SGSHP51688 502 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 HNRNPMP52272 730 aaKnown RBP eCLIP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 RIDAP52758 137 aaKnown RBP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 PDX1P52945 283 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 INHBCP55103 352 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 PKNOX1P55347 436 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 OR4D2P58180 307 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 TAS2R38P59533 333 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 TAS2R60P59551 318 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 ZP1P60852 638 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 PSME3P61289 254 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 PITX1P78337 314 aaPredicted RBP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 MRPS22P82650 360 aaKnown RBP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 PSG6Q00889 435 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 SRSF1Q07955 248 aaKnown RBP eCLIP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 FCHO2Q0JRZ9 810 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 ZP4Q12836 540 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 KLRB1Q12918 225 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 SRSF6Q13247 344 aaKnown RBP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 IL18R1Q13478 541 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 GPR50Q13585 617 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 OPCMLQ14982 345 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 SLC9A3R2Q15599 337 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 ZBTB6Q15916 424 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 ZNF77Q15935 545 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 HLFQ16534 295 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 EIF2S3LQ2VIR3 472 aaKnown RBP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 TRIM16LQ309B1 348 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 TMEM176BQ3YBM2 270 aaPredicted RBP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 ZNF672Q499Z4 452 aaPredicted RBP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 ACSM3Q53FZ2 586 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 EARS2Q5JPH6 523 aaKnown RBP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 CCNJQ5T5M9 372 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 PRAMEF17Q5VTA0 474 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 C1orf146Q5VVC0 180 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 TRIQKQ629K1 86 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 FAM45BPQ6NSW5 357 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 FAHD1Q6P587 224 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 LEG1Q6P5S2 330 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 FAM131AQ6UXB0 335 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 C3P1Q6ZMU1 363 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 LRRC55Q6ZSA7 311 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 RFPL4BQ6ZWI9 263 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 CREB3L2Q70SY1 520 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 ZNF367Q7RTV3 350 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 COX8CQ7Z4L0 72 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 CLVS1Q8IUQ0 354 aaPredicted RBP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 NAXDQ8IW45 347 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 TP53INP2Q8IXH6 220 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 ZC3H3Q8IXZ2 948 aaKnown RBP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 MMD2Q8IY49 270 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 PDIK1LQ8N165 341 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 OR10V1Q8NGI7 309 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 OR52N1Q8NH53 320 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 RNASE11Q8TAA1 199 aaKnown RBP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 THAP6Q8TBB0 222 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 FAM45AQ8TCE6 357 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 ACER1Q8TDN7 264 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 MRGPRDQ8TDS7 321 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 CXorf40AQ8TE69 158 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 SMAP2Q8WU79 429 aaPredicted RBP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 MYLIPQ8WY64 445 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 GTF3AQ92664 365 aaKnown RBP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 TFGQ92734 400 aaPredicted RBP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 UBE2E3Q969T4 207 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 ERGIC1Q969X5 290 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 DACT3Q96B18 629 aaPredicted RBP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 DGCR14Q96DF8 476 aaKnown RBP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 BPIFA2Q96DR5 249 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 TCEAL4Q96EI5 215 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 SGTBQ96EQ0 304 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 SDSLQ96GA7 329 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 ZNF641Q96N77 438 aaPredicted RBP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 TSC22D3Q99576 134 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 MAP3K3Q99759 626 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 ATP5SQ99766 215 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 DHRS9Q9BPW9 319 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 KLHDC3Q9BQ90 382 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 CALN1Q9BXU9 219 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 BEX2Q9BXY8 128 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 BARHL1Q9BZE3 327 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 RAB34Q9BZG1 259 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 UCK2Q9BZX2 261 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 LAT2Q9GZY6 243 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 LHPPQ9H008 270 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 SLC25A51Q9H1U9 297 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 PPA2Q9H2U2 334 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 ZCCHC4Q9H5U6 513 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 ASB7Q9H672 318 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 NHEJ1Q9H9Q4 299 aaPredicted RBP2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 PLEKHA1Q9HB21 404 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 POPDC2Q9HBU9 364 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 GALNT9Q9HCQ5 603 aa2.8□□□□□ -1.96
CTDSPL-203ENST00000416688 ABCB9Q9NP78 766 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms