RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 SLC38A5Q8WUX1 472 aa15.5■□□□□ 0.07
PDLIM2-208ENST00000416159 RADILQ96JH8 1075 aa15.5■□□□□ 0.07
PDLIM2-208ENST00000416159 RAD21L1Q9H4I0 556 aa15.5■□□□□ 0.07
PDLIM2-208ENST00000416159 ARMC7Q9H6L4 198 aa15.5■□□□□ 0.07
PDLIM2-208ENST00000416159 RLIMQ9NVW2 624 aa15.5■□□□□ 0.07
PDLIM2-208ENST00000416159 UPB1Q9UBR1 384 aa15.5■□□□□ 0.07
PDLIM2-208ENST00000416159 MALT1Q9UDY8 824 aa15.5■□□□□ 0.07
PDLIM2-208ENST00000416159 MGAT4BQ9UQ53 548 aa15.5■□□□□ 0.07
PDLIM2-208ENST00000416159 FLVCR1Q9Y5Y0 555 aa15.5■□□□□ 0.07
PDLIM2-208ENST00000416159 USH1CQ9Y6N9 552 aa15.5■□□□□ 0.07
PDLIM2-208ENST00000416159 ZC3H12DA2A288 527 aaKnown RBP15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 SHISA9B4DS77 424 aa15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 GPIP06744 558 aa15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 THBS1P07996 1170 aa15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 IDUAP35475 653 aa15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 ACAA2P42765 397 aaKnown RBP15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 FAPQ12884 760 aa15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 SLC17A1Q14916 467 aa15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 PGGHGQ32M88 737 aa15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 GTDC1Q4AE62 458 aa15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 AGBL2Q5U5Z8 902 aa15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 RNF220Q5VTB9 566 aa15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 WBP2NLQ6ICG8 309 aa15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 KLHL17Q6TDP4 642 aa15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 EPGNQ6UW88 154 aa15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 TMEM108Q6UXF1 575 aa15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 CASP12Q6UXS9 341 aa15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 CADM2Q8N3J6 435 aa15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 OR9I1Q8NGQ6 314 aa15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 OR52N5Q8NH56 324 aa15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 VPS33AQ96AX1 596 aa15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 MUS81Q96NY9 551 aa15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 SF3B5Q9BWJ5 86 aaKnown RBP15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 GRIP2Q9C0E4 1043 aa15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 ALG2Q9H553 416 aa15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 PIF1Q9H611 641 aa15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 FAIMQ9NVQ4 179 aa15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 NPAP1Q9NZP6 1156 aa15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 ZNF443Q9Y2A4 671 aaPredicted RBP15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 IFT52Q9Y366 437 aa15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 MAGED1Q9Y5V3 778 aaPredicted RBP15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 SLC25A15Q9Y619 301 aa15.49■□□□□ 0.07
PDLIM2-208ENST00000416159 ABCD4O14678 606 aa15.48■□□□□ 0.07
PDLIM2-208ENST00000416159 TGDSO95455 350 aa15.48■□□□□ 0.07
PDLIM2-208ENST00000416159 PTAFRP25105 342 aa15.48■□□□□ 0.07
PDLIM2-208ENST00000416159 CDH11P55287 796 aa15.48■□□□□ 0.07
PDLIM2-208ENST00000416159 CEACAM7Q14002 265 aa15.48■□□□□ 0.07
PDLIM2-208ENST00000416159 GABRA6Q16445 453 aa15.48■□□□□ 0.07
PDLIM2-208ENST00000416159 CLEC12BQ2HXU8 276 aa15.48■□□□□ 0.07
PDLIM2-208ENST00000416159 OTUD3Q5T2D3 398 aaPredicted RBP15.48■□□□□ 0.07
PDLIM2-208ENST00000416159 PRAMEF8Q5VWM4 474 aa15.48■□□□□ 0.07
PDLIM2-208ENST00000416159 PRAMEF7Q5VXH5 474 aa15.48■□□□□ 0.07
PDLIM2-208ENST00000416159 CLIP4Q8N3C7 705 aa15.48■□□□□ 0.07
PDLIM2-208ENST00000416159 OR52E4Q8NGH9 312 aa15.48■□□□□ 0.07
PDLIM2-208ENST00000416159 GTF2H4Q92759 462 aa15.48■□□□□ 0.07
PDLIM2-208ENST00000416159 TMEM45BQ96B21 275 aa15.48■□□□□ 0.07
PDLIM2-208ENST00000416159 AURKBQ96GD4 344 aaPredicted RBP15.48■□□□□ 0.07
PDLIM2-208ENST00000416159 TMEM19Q96HH6 336 aa15.48■□□□□ 0.07
PDLIM2-208ENST00000416159 C7orf26Q96N11 449 aa15.48■□□□□ 0.07
PDLIM2-208ENST00000416159 TRAF4Q9BUZ4 470 aaPredicted RBP15.48■□□□□ 0.07
PDLIM2-208ENST00000416159 SPATA9Q9BWV2 254 aa15.48■□□□□ 0.07
PDLIM2-208ENST00000416159 TAPBPLQ9BX59 468 aa15.48■□□□□ 0.07
PDLIM2-208ENST00000416159 HEATR1Q9H583 2144 aaKnown RBP15.48■□□□□ 0.07
PDLIM2-208ENST00000416159 DCTN4Q9UJW0 460 aa15.48■□□□□ 0.07
PDLIM2-208ENST00000416159 PCDHB14Q9Y5E9 798 aa15.48■□□□□ 0.07
PDLIM2-208ENST00000416159 FN1P02751 2386 aaKnown RBP15.47■□□□□ 0.07
PDLIM2-208ENST00000416159 LIPT2A6NK58 231 aa15.47■□□□□ 0.07
PDLIM2-208ENST00000416159 A8MVM7 634 aa15.47■□□□□ 0.07
PDLIM2-208ENST00000416159 PDLIM1O00151 329 aa15.47■□□□□ 0.07
PDLIM2-208ENST00000416159 CLIC1O00299 241 aa15.47■□□□□ 0.07
PDLIM2-208ENST00000416159 ITGA5P08648 1049 aa15.47■□□□□ 0.07
PDLIM2-208ENST00000416159 NCF2P19878 526 aaPredicted RBP15.47■□□□□ 0.07
PDLIM2-208ENST00000416159 CDKN1AP38936 164 aa15.47■□□□□ 0.07
PDLIM2-208ENST00000416159 MRPL19P49406 292 aaKnown RBP15.47■□□□□ 0.07
PDLIM2-208ENST00000416159 STX1BP61266 288 aa15.47■□□□□ 0.07
PDLIM2-208ENST00000416159 TNK1Q13470 666 aa15.47■□□□□ 0.07
PDLIM2-208ENST00000416159 RGNQ15493 299 aa15.47■□□□□ 0.07
PDLIM2-208ENST00000416159 OR7A5Q15622 319 aa15.47■□□□□ 0.07
PDLIM2-208ENST00000416159 RPS26P11Q5JNZ5 115 aaPredicted RBP15.47■□□□□ 0.07
PDLIM2-208ENST00000416159 C1QTNF12Q5T7M4 302 aa15.47■□□□□ 0.07
PDLIM2-208ENST00000416159 DTX2Q86UW9 622 aa15.47■□□□□ 0.07
PDLIM2-208ENST00000416159 TMEM99Q8N816 258 aa15.47■□□□□ 0.07
PDLIM2-208ENST00000416159 AMBRA1Q9C0C7 1298 aa15.47■□□□□ 0.07
PDLIM2-208ENST00000416159 PAIP1Q9H074 479 aaKnown RBP15.47■□□□□ 0.07
PDLIM2-208ENST00000416159 BCL2L10Q9HD36 194 aa15.47■□□□□ 0.07
PDLIM2-208ENST00000416159 HIVEP2P31629 2446 aa15.47■□□□□ 0.07
PDLIM2-208ENST00000416159 A0A096LPI6 279 aa15.46■□□□□ 0.07
PDLIM2-208ENST00000416159 AQP7P3A6NL99 342 aa15.46■□□□□ 0.07
PDLIM2-208ENST00000416159 POLR3GO15318 223 aaPredicted RBP15.46■□□□□ 0.07
PDLIM2-208ENST00000416159 AKR7A3O95154 331 aa15.46■□□□□ 0.07
PDLIM2-208ENST00000416159 CD8AP01732 235 aa15.46■□□□□ 0.07
PDLIM2-208ENST00000416159 ZNF83P51522 516 aa15.46■□□□□ 0.07
PDLIM2-208ENST00000416159 FOXG1P55316 489 aaPredicted RBP15.46■□□□□ 0.07
PDLIM2-208ENST00000416159 TGFBR3Q03167 851 aa15.46■□□□□ 0.07
PDLIM2-208ENST00000416159 FADDQ13158 208 aa15.46■□□□□ 0.07
PDLIM2-208ENST00000416159 VEZF1Q14119 521 aa15.46■□□□□ 0.07
PDLIM2-208ENST00000416159 ZNF311Q5JNZ3 666 aa15.46■□□□□ 0.07
PDLIM2-208ENST00000416159 TSPO2Q5TGU0 170 aa15.46■□□□□ 0.07
PDLIM2-208ENST00000416159 AGAP6Q5VW22 663 aa15.46■□□□□ 0.07
PDLIM2-208ENST00000416159 TMEM225Q6GV28 225 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms