RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 MRPL22Q9NWU5 206 aaKnown RBP7.87□□□□□ -1.15
SYNE1-211ENST00000413186 NYNRINQ9P2P1 1898 aaKnown RBP7.87□□□□□ -1.15
SYNE1-211ENST00000413186 REV1Q9UBZ9 1251 aa7.87□□□□□ -1.15
SYNE1-211ENST00000413186 KLF13Q9Y2Y9 288 aaPredicted RBP7.87□□□□□ -1.15
SYNE1-211ENST00000413186 MEMO1Q9Y316 297 aa7.87□□□□□ -1.15
SYNE1-211ENST00000413186 TMEM14AQ9Y6G1 99 aa7.87□□□□□ -1.15
SYNE1-211ENST00000413186 HMGN4O00479 90 aa7.87□□□□□ -1.15
SYNE1-211ENST00000413186 PDCD5O14737 125 aa7.87□□□□□ -1.15
SYNE1-211ENST00000413186 MAGEB3O15480 346 aa7.87□□□□□ -1.15
SYNE1-211ENST00000413186 RAB36O95755 333 aa7.87□□□□□ -1.15
SYNE1-211ENST00000413186 ZNF26P17031 533 aaPredicted RBP7.87□□□□□ -1.15
SYNE1-211ENST00000413186 PRKCAP17252 672 aa7.87□□□□□ -1.15
SYNE1-211ENST00000413186 FUT1P19526 365 aa7.87□□□□□ -1.15
SYNE1-211ENST00000413186 DCKP27707 260 aa7.87□□□□□ -1.15
SYNE1-211ENST00000413186 IDUAP35475 653 aa7.87□□□□□ -1.15
SYNE1-211ENST00000413186 GPR4P46093 362 aa7.87□□□□□ -1.15
SYNE1-211ENST00000413186 POLR2HP52434 150 aaKnown RBP7.87□□□□□ -1.15
SYNE1-211ENST00000413186 UBE2KP61086 200 aa7.87□□□□□ -1.15
SYNE1-211ENST00000413186 NKG7Q16617 165 aa7.87□□□□□ -1.15
SYNE1-211ENST00000413186 AGAP7PQ5VUJ5 663 aa7.87□□□□□ -1.15
SYNE1-211ENST00000413186 MRM1Q6IN84 353 aaKnown RBP7.87□□□□□ -1.15
SYNE1-211ENST00000413186 GDPGP1Q6ZNW5 385 aa7.87□□□□□ -1.15
SYNE1-211ENST00000413186 TMPRSS12Q86WS5 348 aa7.87□□□□□ -1.15
SYNE1-211ENST00000413186 UEVLDQ8IX04 471 aa7.87□□□□□ -1.15
SYNE1-211ENST00000413186 MTURNQ8N3F0 131 aa7.87□□□□□ -1.15
SYNE1-211ENST00000413186 PSD4Q8NDX1 1056 aa7.87□□□□□ -1.15
SYNE1-211ENST00000413186 PLPP5Q8NEB5 264 aa7.87□□□□□ -1.15
SYNE1-211ENST00000413186 C8orf44Q96CB5 159 aa7.87□□□□□ -1.15
SYNE1-211ENST00000413186 AGAP4Q96P64 663 aa7.87□□□□□ -1.15
SYNE1-211ENST00000413186 C19orf12Q9NSK7 152 aa7.87□□□□□ -1.15
SYNE1-211ENST00000413186 A6NIZ1 184 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 ARGFXA6NJG6 315 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 MKRN2OSH3BPM6 223 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 NAGAP17050 411 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 POU3F2P20265 443 aaPredicted RBP7.86□□□□□ -1.15
SYNE1-211ENST00000413186 RAP1BP61224 184 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 RAP1AP62834 184 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 ZNF404Q494X3 552 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 ZFP69Q49AA0 526 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 FAM131AQ6UXB0 335 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 PAPD5Q8NDF8 572 aaKnown RBP7.86□□□□□ -1.15
SYNE1-211ENST00000413186 FAM46AQ96IP4 442 aaKnown RBP7.86□□□□□ -1.15
SYNE1-211ENST00000413186 OR5B2Q96R09 309 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 RNF121Q9H920 327 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 RYDENQ9NUL5 291 aaKnown RBP7.86□□□□□ -1.15
SYNE1-211ENST00000413186 SLC25A37Q9NYZ2 338 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 EXOGQ9Y2C4 368 aaKnown RBP7.86□□□□□ -1.15
SYNE1-211ENST00000413186 RIF1Q5UIP0 2472 aaKnown RBP7.86□□□□□ -1.15
SYNE1-211ENST00000413186 SPAARA0A1B0GVQ0 90 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 HMX3A6NHT5 357 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 DRD5P21918 477 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 DPP4P27487 766 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 GALNSP34059 522 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 SLC35F1Q5T1Q4 408 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 JMJD6Q6NYC1 403 aaPredicted RBP7.86□□□□□ -1.15
SYNE1-211ENST00000413186 ZNF100Q8IYN0 542 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 OR4C15Q8NGM1 316 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 OR2Y1Q8NGV0 311 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 OR2T4Q8NH00 348 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 TAMM41Q96BW9 452 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 BPIFA2Q96DR5 249 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 NRSN2Q9GZP1 204 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 PARPBPQ9NWS1 579 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 OCIAD1Q9NX40 245 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 ZNF226Q9NYT6 803 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 TDRD6O60522 2096 aaKnown RBP7.86□□□□□ -1.15
SYNE1-211ENST00000413186 LNP1A1A4G5 178 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 SLC22A31A6NKX4 558 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 KCNK2O95069 426 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 ELK4P28324 431 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 SFTPDP35247 375 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 DUSP8Q13202 625 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 PRAMEF20Q5VT98 475 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 DGLUCYQ7Z3D6 616 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 OR8H3Q8N146 312 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 OR2L13Q8N349 312 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 SLC15A4Q8N697 577 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 ZBTB44Q8NCP5 570 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 NEK7Q8TDX7 302 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 SLC25A43Q8WUT9 341 aaPredicted RBP7.86□□□□□ -1.15
SYNE1-211ENST00000413186 DHRS1Q96LJ7 313 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 ADAD1Q96M93 576 aaKnown RBP7.86□□□□□ -1.15
SYNE1-211ENST00000413186 ORAI3Q9BRQ5 295 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 WDR54Q9H977 334 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 ZNF221Q9UK13 617 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 SLC6A5Q9Y345 797 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 NOP16Q9Y3C1 178 aaKnown RBP7.86□□□□□ -1.15
SYNE1-211ENST00000413186 ZNF705GA8MUZ8 300 aaPredicted RBP7.86□□□□□ -1.15
SYNE1-211ENST00000413186 FXYD1O00168 92 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 CIDEAO60543 219 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 CCL4P13236 92 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 FAUP35544 74 aaKnown RBP7.86□□□□□ -1.15
SYNE1-211ENST00000413186 CTXN1P60606 82 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 ACTC1P68032 377 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 ACTA1P68133 377 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 PLP2Q04941 152 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 POU4F2Q12837 409 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 CRTC2Q53ET0 693 aaPredicted RBP7.86□□□□□ -1.15
SYNE1-211ENST00000413186 ALKBH2Q6NS38 261 aa7.86□□□□□ -1.15
SYNE1-211ENST00000413186 KCTD18Q6PI47 426 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms