RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 PRICKLE3O43900 615 aaPredicted RBP12.9□□□□□ -0.34
CLTCL1-201ENST00000412649 TSPAN15O95858 294 aa12.9□□□□□ -0.34
CLTCL1-201ENST00000412649 SPI1P17947 270 aa12.9□□□□□ -0.34
CLTCL1-201ENST00000412649 CAPZA1P52907 286 aa12.9□□□□□ -0.34
CLTCL1-201ENST00000412649 TRA2BP62995 288 aaKnown RBP12.9□□□□□ -0.34
CLTCL1-201ENST00000412649 NHLRC1Q6VVB1 395 aa12.9□□□□□ -0.34
CLTCL1-201ENST00000412649 CAMKVQ8NCB2 501 aa12.9□□□□□ -0.34
CLTCL1-201ENST00000412649 GPR148Q8TDV2 347 aa12.9□□□□□ -0.34
CLTCL1-201ENST00000412649 WDR89Q96FK6 387 aaPredicted RBP12.9□□□□□ -0.34
CLTCL1-201ENST00000412649 AMDHD1Q96NU7 426 aa12.9□□□□□ -0.34
CLTCL1-201ENST00000412649 GPER1Q99527 375 aa12.9□□□□□ -0.34
CLTCL1-201ENST00000412649 ELL3Q9HB65 397 aaPredicted RBP12.9□□□□□ -0.34
CLTCL1-201ENST00000412649 SRA1Q9HD15 236 aaKnown RBP12.9□□□□□ -0.34
CLTCL1-201ENST00000412649 SLC45A1Q9Y2W3 748 aa12.9□□□□□ -0.34
CLTCL1-201ENST00000412649 LRIT2A6NDA9 550 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 TMEM202A6NGA9 273 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 NPIPB8E9PQR5 432 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 PLPP1O14494 284 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 YKT6O15498 198 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 ZNF208O43345 1280 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 PAPLNO95428 1278 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 IFNA21P01568 189 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 PGAM2P15259 253 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 CDK2P24941 298 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 CCKBRP32239 447 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 CAP1Q01518 475 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 ID2Q02363 134 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 ARFRP1Q13795 201 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 NUMA1Q14980 2115 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 ALG10BQ5I7T1 473 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 ZNF529Q6P280 563 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 UQCC3Q6UW78 93 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 PXKQ7Z7A4 578 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 RNF113BQ8IZP6 322 aaKnown RBP12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 MFSD8Q8NHS3 518 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 STK35Q8TDR2 534 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 TMEM106CQ9BVX2 250 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 MEPEQ9NQ76 525 aaPredicted RBP12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 A0A0B4J2A0 478 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 A0A1W2PRU2 124 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 FAM171A2A8MVW0 826 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 IMPA2O14732 288 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 P2RX6O15547 441 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 KCNJ13O60928 360 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 TAS2R20P59543 309 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 CLLU1OSQ5K130 101 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 ELFN2Q5R3F8 820 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 SHEQ5VZ18 495 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 FIGNL1Q6PIW4 674 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 BPIFB2Q8N4F0 458 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 ZNF248Q8NDW4 579 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 OR10G6Q8NH81 332 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 EID2BQ96D98 161 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 MS4A4EQ96PG1 132 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 UBL7Q96S82 380 aaPredicted RBP12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 SHPKQ9UHJ6 478 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 DHDHQ9UQ10 334 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 RPH3AQ9Y2J0 694 aaPredicted RBP12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 TMEM14AQ9Y6G1 99 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 TRAV1-2A0A0B4J238 106 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 F11P03951 625 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 SFTPBP07988 381 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 GATMP50440 423 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 CXADRP78310 365 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 ENPP2Q13822 863 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 C9orf131Q5VYM1 1079 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 OR2L3Q8NG85 312 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 LCN9Q8WX39 176 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 CDS1Q92903 461 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 DERL3Q96Q80 235 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 GRHPRQ9UBQ7 328 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 DNAJB6O75190 326 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 SPARCP09486 303 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 EIF4EBP2Q13542 120 aaPredicted RBP12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 SLC6A19Q695T7 634 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 VASNQ6EMK4 673 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 OR4Q3Q8NH05 313 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 PRRT1Q99946 306 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 SULT4A1Q9BR01 284 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 MS4A8Q9BY19 250 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 GPR160Q9UJ42 338 aa12.89□□□□□ -0.35
CLTCL1-201ENST00000412649 TBC1D3KA0A087X1G2 549 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 TBC1D3BA6NDS4 549 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 TBC1D3FA6NER0 549 aaPredicted RBP12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 OR6C65A6NJZ3 312 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 PYCARD-AS1I3L0S3 204 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 PRKAR1BP31321 381 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 OR1Q1Q15612 314 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 HYAL4Q2M3T9 481 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 C6orf132Q5T0Z8 1188 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 TBC1D3GQ6DHY5 549 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 LEG1Q6P5S2 330 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 OR5M9Q8NGP3 310 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 DVL3Q92997 716 aaPredicted RBP12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 CPEB1Q9BZB8 566 aaKnown RBP12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 IFITM5A6NNB3 132 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 GCM2O75603 506 aaPredicted RBP12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 SCGB1D2O95969 90 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 CPN1P15169 458 aa12.88□□□□□ -0.35
CLTCL1-201ENST00000412649 GABRA3P34903 492 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms