RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 TMEM229AB2RXF0 380 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 NME4O00746 187 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 SMAD9O15198 467 aaKnown RBP9.73□□□□□ -0.85
CHMP3-205ENST00000409810 GMNNO75496 209 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 GCM2O75603 506 aaPredicted RBP9.73□□□□□ -0.85
CHMP3-205ENST00000409810 YES1P07947 543 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 PCYT1AP49585 367 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 MXRA7P84157 204 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 KRT72Q14CN4 511 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 PDK3Q15120 406 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 OR1Q1Q15612 314 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 SWT1Q5T5J6 900 aaKnown RBP9.73□□□□□ -0.85
CHMP3-205ENST00000409810 C1orf140Q5VVS0 124 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 ABLIM2Q6H8Q1 611 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 ZNF613Q6PF04 617 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 PAQR6Q6TCH4 344 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 C16orf89Q6UX73 402 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 BTLAQ7Z6A9 289 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 COMTD1Q86VU5 262 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 TUSC5Q8IXB3 177 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 PGAM4Q8N0Y7 254 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 GPR32P1Q8NGA4 272 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 VANGL1Q8TAA9 524 aaPredicted RBP9.73□□□□□ -0.85
CHMP3-205ENST00000409810 RNF217Q8TC41 542 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 SLC38A4Q969I6 547 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 EPYCQ99645 322 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 MCHR1Q99705 422 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 PSD2Q9BQI7 771 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 BCO1Q9HAY6 547 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 ADPRHL2Q9NX46 363 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 GALNT8Q9NY28 637 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 ELOVL5Q9NYP7 299 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 ADA2Q9NZK5 511 aa9.73□□□□□ -0.85
CHMP3-205ENST00000409810 ZC3H12DA2A288 527 aaKnown RBP9.72□□□□□ -0.85
CHMP3-205ENST00000409810 TUBAL3A6NHL2 446 aa9.72□□□□□ -0.85
CHMP3-205ENST00000409810 LIPT2A6NK58 231 aa9.72□□□□□ -0.85
CHMP3-205ENST00000409810 CXCR6O00574 342 aa9.72□□□□□ -0.85
CHMP3-205ENST00000409810 GPR171O14626 319 aa9.72□□□□□ -0.85
CHMP3-205ENST00000409810 OR2T1O43869 369 aa9.72□□□□□ -0.85
CHMP3-205ENST00000409810 POU2F1P14859 743 aa9.72□□□□□ -0.85
CHMP3-205ENST00000409810 FPR1P21462 350 aa9.72□□□□□ -0.85
CHMP3-205ENST00000409810 IFNA8P32881 189 aa9.72□□□□□ -0.85
CHMP3-205ENST00000409810 KDELR2P33947 212 aa9.72□□□□□ -0.85
CHMP3-205ENST00000409810 KIR2DL3P43628 341 aa9.72□□□□□ -0.85
CHMP3-205ENST00000409810 GSK3BP49841 420 aa9.72□□□□□ -0.85
CHMP3-205ENST00000409810 BNIP2Q12982 314 aa9.72□□□□□ -0.85
CHMP3-205ENST00000409810 CEACAM7Q14002 265 aa9.72□□□□□ -0.85
CHMP3-205ENST00000409810 MFSD13AQ14CX5 517 aa9.72□□□□□ -0.85
CHMP3-205ENST00000409810 OR7A5Q15622 319 aa9.72□□□□□ -0.85
CHMP3-205ENST00000409810 CYBRD1Q53TN4 286 aa9.72□□□□□ -0.85
CHMP3-205ENST00000409810 BEND4Q6ZU67 534 aa9.72□□□□□ -0.85
CHMP3-205ENST00000409810 GALNT5Q7Z7M9 940 aa9.72□□□□□ -0.85
CHMP3-205ENST00000409810 CARM1Q86X55 608 aa9.72□□□□□ -0.85
CHMP3-205ENST00000409810 OR6T1Q8NGN1 323 aa9.72□□□□□ -0.85
CHMP3-205ENST00000409810 BCAS4Q8TDM0 211 aa9.72□□□□□ -0.85
CHMP3-205ENST00000409810 FAM162AQ96A26 154 aa9.72□□□□□ -0.85
CHMP3-205ENST00000409810 DNAJA3Q96EY1 480 aa9.72□□□□□ -0.85
CHMP3-205ENST00000409810 RSPO3Q9BXY4 272 aaPredicted RBP9.72□□□□□ -0.85
CHMP3-205ENST00000409810 POLR2J2Q9GZM3 115 aaKnown RBP9.72□□□□□ -0.85
CHMP3-205ENST00000409810 PCDHAC1Q9H158 963 aa9.72□□□□□ -0.85
CHMP3-205ENST00000409810 POLR2J3Q9H1A7 115 aaKnown RBP9.72□□□□□ -0.85
CHMP3-205ENST00000409810 OPN3Q9H1Y3 402 aaPredicted RBP9.72□□□□□ -0.85
CHMP3-205ENST00000409810 PLSCR4Q9NRQ2 329 aa9.72□□□□□ -0.85
CHMP3-205ENST00000409810 KCNN3Q9UGI6 736 aa9.72□□□□□ -0.85
CHMP3-205ENST00000409810 USP22Q9UPT9 525 aa9.72□□□□□ -0.85
CHMP3-205ENST00000409810 SH3GLB1Q9Y371 365 aa9.72□□□□□ -0.85
CHMP3-205ENST00000409810 SETXQ7Z333 2677 aaKnown RBP9.71□□□□□ -0.85
CHMP3-205ENST00000409810 TRAV36DV7A0A075B6V5 113 aa9.71□□□□□ -0.86
CHMP3-205ENST00000409810 A0A087WUJ7 227 aa9.71□□□□□ -0.86
CHMP3-205ENST00000409810 TRAPPC13A5PLN9 417 aa9.71□□□□□ -0.86
CHMP3-205ENST00000409810 CPSF4LA6NMK7 179 aaKnown RBP9.71□□□□□ -0.86
CHMP3-205ENST00000409810 CHP2O43745 196 aa9.71□□□□□ -0.86
CHMP3-205ENST00000409810 NPIPB7O75200 414 aa9.71□□□□□ -0.86
CHMP3-205ENST00000409810 CGAP01215 116 aa9.71□□□□□ -0.86
CHMP3-205ENST00000409810 IMPDH2P12268 514 aa9.71□□□□□ -0.86
CHMP3-205ENST00000409810 CALB2P22676 271 aa9.71□□□□□ -0.86
CHMP3-205ENST00000409810 SSTR2P30874 369 aa9.71□□□□□ -0.86
CHMP3-205ENST00000409810 CD79BP40259 229 aa9.71□□□□□ -0.86
CHMP3-205ENST00000409810 CRYBA2P53672 197 aa9.71□□□□□ -0.86
CHMP3-205ENST00000409810 SLC16A1P53985 500 aa9.71□□□□□ -0.86
CHMP3-205ENST00000409810 TAS2R41P59536 307 aa9.71□□□□□ -0.86
CHMP3-205ENST00000409810 SELENOWP63302 87 aa9.71□□□□□ -0.86
CHMP3-205ENST00000409810 SPATS1Q496A3 300 aa9.71□□□□□ -0.86
CHMP3-205ENST00000409810 ENTPD8Q5MY95 495 aa9.71□□□□□ -0.86
CHMP3-205ENST00000409810 SAMD4BQ5PRF9 694 aaKnown RBP9.71□□□□□ -0.86
CHMP3-205ENST00000409810 OTUD3Q5T2D3 398 aaPredicted RBP9.71□□□□□ -0.86
CHMP3-205ENST00000409810 FAM69AQ5T7M9 428 aa9.71□□□□□ -0.86
CHMP3-205ENST00000409810 FITM2Q8N6M3 262 aa9.71□□□□□ -0.86
CHMP3-205ENST00000409810 MFSD8Q8NHS3 518 aa9.71□□□□□ -0.86
CHMP3-205ENST00000409810 ADAMTS16Q8TE57 1224 aa9.71□□□□□ -0.86
CHMP3-205ENST00000409810 C14orf79Q96F83 325 aa9.71□□□□□ -0.86
CHMP3-205ENST00000409810 NSL1Q96IY1 281 aa9.71□□□□□ -0.86
CHMP3-205ENST00000409810 TPD52L3Q96J77 140 aa9.71□□□□□ -0.86
CHMP3-205ENST00000409810 TMEM43Q9BTV4 400 aa9.71□□□□□ -0.86
CHMP3-205ENST00000409810 SF3B5Q9BWJ5 86 aaKnown RBP9.71□□□□□ -0.86
CHMP3-205ENST00000409810 C12orf49Q9H741 205 aa9.71□□□□□ -0.86
CHMP3-205ENST00000409810 ARL8BQ9NVJ2 186 aa9.71□□□□□ -0.86
CHMP3-205ENST00000409810 C6orf203Q9P0P8 240 aaPredicted RBP9.71□□□□□ -0.86
CHMP3-205ENST00000409810 NDRG3Q9UGV2 375 aa9.71□□□□□ -0.86
CHMP3-205ENST00000409810 RPS6KA6Q9UK32 745 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms