RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 ARMC7Q9H6L4 198 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 DCTN4Q9UJW0 460 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 POU2F3Q9UKI9 436 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 FLVCR1Q9Y5Y0 555 aa12.99□□□□□ -0.33
CBX3-203ENST00000409747 CDHR4A6H8M9 788 aa12.98□□□□□ -0.33
CBX3-203ENST00000409747 INAFM1C9JVW0 142 aa12.98□□□□□ -0.33
CBX3-203ENST00000409747 IMPDH2P12268 514 aa12.98□□□□□ -0.33
CBX3-203ENST00000409747 CXCR1P25024 350 aa12.98□□□□□ -0.33
CBX3-203ENST00000409747 CRATP43155 626 aa12.98□□□□□ -0.33
CBX3-203ENST00000409747 DSTNP60981 165 aa12.98□□□□□ -0.33
CBX3-203ENST00000409747 LARS2Q15031 903 aaKnown RBP12.98□□□□□ -0.33
CBX3-203ENST00000409747 RNF220Q5VTB9 566 aa12.98□□□□□ -0.33
CBX3-203ENST00000409747 SLC22A25Q6T423 547 aa12.98□□□□□ -0.33
CBX3-203ENST00000409747 ZBTB9Q96C00 473 aa12.98□□□□□ -0.33
CBX3-203ENST00000409747 MUS81Q96NY9 551 aa12.98□□□□□ -0.33
CBX3-203ENST00000409747 SLCO5A1Q9H2Y9 848 aa12.98□□□□□ -0.33
CBX3-203ENST00000409747 MANSC1Q9H8J5 431 aa12.98□□□□□ -0.33
CBX3-203ENST00000409747 SDR39U1Q9NRG7 319 aaPredicted RBP12.98□□□□□ -0.33
CBX3-203ENST00000409747 SLC25A15Q9Y619 301 aa12.98□□□□□ -0.33
CBX3-203ENST00000409747 TLN2Q9Y4G6 2542 aa12.98□□□□□ -0.33
CBX3-203ENST00000409747 FAM234BA2RU67 622 aa12.97□□□□□ -0.33
CBX3-203ENST00000409747 RNF223E7ERA6 249 aa12.97□□□□□ -0.33
CBX3-203ENST00000409747 ERLIN1O75477 346 aa12.97□□□□□ -0.33
CBX3-203ENST00000409747 BCHEP06276 602 aa12.97□□□□□ -0.33
CBX3-203ENST00000409747 THBS1P07996 1170 aa12.97□□□□□ -0.33
CBX3-203ENST00000409747 ZNF83P51522 516 aa12.97□□□□□ -0.33
CBX3-203ENST00000409747 DMTNQ08495 405 aa12.97□□□□□ -0.33
CBX3-203ENST00000409747 SLC17A1Q14916 467 aa12.97□□□□□ -0.33
CBX3-203ENST00000409747 GABRA6Q16445 453 aa12.97□□□□□ -0.33
CBX3-203ENST00000409747 OTUD3Q5T2D3 398 aaPredicted RBP12.97□□□□□ -0.33
CBX3-203ENST00000409747 WBP2NLQ6ICG8 309 aa12.97□□□□□ -0.33
CBX3-203ENST00000409747 TMEM45BQ96B21 275 aa12.97□□□□□ -0.33
CBX3-203ENST00000409747 SF3B5Q9BWJ5 86 aaKnown RBP12.97□□□□□ -0.33
CBX3-203ENST00000409747 AMBRA1Q9C0C7 1298 aa12.97□□□□□ -0.33
CBX3-203ENST00000409747 ADAM19Q9H013 955 aa12.97□□□□□ -0.33
CBX3-203ENST00000409747 PIF1Q9H611 641 aa12.97□□□□□ -0.33
CBX3-203ENST00000409747 TPT1P8Q9HAU6 139 aa12.97□□□□□ -0.33
CBX3-203ENST00000409747 ZNF232Q9UNY5 417 aa12.97□□□□□ -0.33
CBX3-203ENST00000409747 AMDHD2Q9Y303 409 aa12.97□□□□□ -0.33
CBX3-203ENST00000409747 A0A096LPI6 279 aa12.96□□□□□ -0.33
CBX3-203ENST00000409747 PDLIM1O00151 329 aa12.96□□□□□ -0.33
CBX3-203ENST00000409747 UBDO15205 165 aa12.96□□□□□ -0.33
CBX3-203ENST00000409747 IGHV4-39P01824 125 aa12.96□□□□□ -0.33
CBX3-203ENST00000409747 TP53P04637 393 aaPredicted RBP12.96□□□□□ -0.33
CBX3-203ENST00000409747 ITGA5P08648 1049 aa12.96□□□□□ -0.33
CBX3-203ENST00000409747 ETFAP13804 333 aa12.96□□□□□ -0.33
CBX3-203ENST00000409747 CD40P25942 277 aa12.96□□□□□ -0.33
CBX3-203ENST00000409747 ACVR1BP36896 505 aa12.96□□□□□ -0.33
CBX3-203ENST00000409747 MAGOHP61326 146 aaKnown RBP12.96□□□□□ -0.33
CBX3-203ENST00000409747 C6orf10Q5SRN2 563 aa12.96□□□□□ -0.33
CBX3-203ENST00000409747 ZNF836Q6ZNA1 936 aa12.96□□□□□ -0.33
CBX3-203ENST00000409747 ABHD12BQ7Z5M8 362 aaPredicted RBP12.96□□□□□ -0.33
CBX3-203ENST00000409747 OR52E4Q8NGH9 312 aa12.96□□□□□ -0.33
CBX3-203ENST00000409747 ADAD1Q96M93 576 aaKnown RBP12.96□□□□□ -0.33
CBX3-203ENST00000409747 DHRS9Q9BPW9 319 aa12.96□□□□□ -0.33
CBX3-203ENST00000409747 TAPBPLQ9BX59 468 aa12.96□□□□□ -0.33
CBX3-203ENST00000409747 REG4Q9BYZ8 158 aa12.96□□□□□ -0.33
CBX3-203ENST00000409747 RAD21L1Q9H4I0 556 aa12.96□□□□□ -0.33
CBX3-203ENST00000409747 RLIMQ9NVW2 624 aa12.96□□□□□ -0.33
CBX3-203ENST00000409747 ZNF443Q9Y2A4 671 aaPredicted RBP12.96□□□□□ -0.33
CBX3-203ENST00000409747 A0A0G2JPF8 293 aa12.96□□□□□ -0.34
CBX3-203ENST00000409747 ZC3H12DA2A288 527 aaKnown RBP12.96□□□□□ -0.34
CBX3-203ENST00000409747 LIPT2A6NK58 231 aa12.96□□□□□ -0.34
CBX3-203ENST00000409747 HNRNPCL2B2RXH8 293 aa12.96□□□□□ -0.34
CBX3-203ENST00000409747 HNRNPCL3B7ZW38 293 aa12.96□□□□□ -0.34
CBX3-203ENST00000409747 M0R1B8 84 aa12.96□□□□□ -0.34
CBX3-203ENST00000409747 KLF11O14901 512 aa12.96□□□□□ -0.34
CBX3-203ENST00000409747 HNRNPCL1O60812 293 aaKnown RBP12.96□□□□□ -0.34
CBX3-203ENST00000409747 CD8AP01732 235 aa12.96□□□□□ -0.34
CBX3-203ENST00000409747 TFPTP0C1Z6 253 aa12.96□□□□□ -0.34
CBX3-203ENST00000409747 HNRNPCL4P0DMR1 293 aa12.96□□□□□ -0.34
CBX3-203ENST00000409747 NCF2P19878 526 aaPredicted RBP12.96□□□□□ -0.34
CBX3-203ENST00000409747 NTF4P34130 210 aa12.96□□□□□ -0.34
CBX3-203ENST00000409747 POLR2JP52435 117 aaKnown RBP12.96□□□□□ -0.34
CBX3-203ENST00000409747 MVDP53602 400 aa12.96□□□□□ -0.34
CBX3-203ENST00000409747 CEACAM7Q14002 265 aa12.96□□□□□ -0.34
CBX3-203ENST00000409747 OR7A5Q15622 319 aa12.96□□□□□ -0.34
CBX3-203ENST00000409747 MAPK11Q15759 364 aa12.96□□□□□ -0.34
CBX3-203ENST00000409747 SLC9B1Q4ZJI4 515 aa12.96□□□□□ -0.34
CBX3-203ENST00000409747 KLHL24Q6TFL4 600 aa12.96□□□□□ -0.34
CBX3-203ENST00000409747 VRK2Q86Y07 508 aa12.96□□□□□ -0.34
CBX3-203ENST00000409747 FBXL14Q8N1E6 418 aa12.96□□□□□ -0.34
CBX3-203ENST00000409747 MIER2Q8N344 545 aa12.96□□□□□ -0.34
CBX3-203ENST00000409747 CADM2Q8N3J6 435 aa12.96□□□□□ -0.34
CBX3-203ENST00000409747 POMGNT2Q8NAT1 580 aa12.96□□□□□ -0.34
CBX3-203ENST00000409747 OR9K2Q8NGE7 335 aa12.96□□□□□ -0.34
CBX3-203ENST00000409747 SLC38A5Q8WUX1 472 aa12.96□□□□□ -0.34
CBX3-203ENST00000409747 SLC6A13Q9NSD5 602 aa12.96□□□□□ -0.34
CBX3-203ENST00000409747 CBLN4Q9NTU7 201 aa12.96□□□□□ -0.34
CBX3-203ENST00000409747 IFT52Q9Y366 437 aa12.96□□□□□ -0.34
CBX3-203ENST00000409747 DNHD1Q96M86 4753 aa12.95□□□□□ -0.34
CBX3-203ENST00000409747 AQP7P3A6NL99 342 aa12.95□□□□□ -0.34
CBX3-203ENST00000409747 A8MVM7 634 aa12.95□□□□□ -0.34
CBX3-203ENST00000409747 VAMP5O95183 116 aa12.95□□□□□ -0.34
CBX3-203ENST00000409747 WNT11O96014 354 aa12.95□□□□□ -0.34
CBX3-203ENST00000409747 GKN3PP0CG01 181 aa12.95□□□□□ -0.34
CBX3-203ENST00000409747 MPGP29372 298 aa12.95□□□□□ -0.34
CBX3-203ENST00000409747 TTKP33981 857 aa12.95□□□□□ -0.34
CBX3-203ENST00000409747 PRAMEF8Q5VWM4 474 aa12.95□□□□□ -0.34
CBX3-203ENST00000409747 PRAMEF7Q5VXH5 474 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms