RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 RNF115Q9Y4L5 304 aa12.86□□□□□ -0.35
NIF3L1-205ENST00000409588 EVPLLA8MZ36 301 aa12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 C5orf58C9J3I9 102 aa12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 AP3D1O14617 1153 aa12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 C1QCP02747 245 aa12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 AQP5P55064 265 aa12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 TGFBR3Q03167 851 aa12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 CAPRIN1Q14444 709 aaKnown RBP12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 PPA1Q15181 289 aa12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 KRTAP21-3Q3LHN1 58 aa12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 ZNF311Q5JNZ3 666 aa12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 C5orf46Q6UWT4 87 aa12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 KRT73Q86Y46 540 aa12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 UBE2J2Q8N2K1 259 aa12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 ZNF433Q8N7K0 673 aaPredicted RBP12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 OR9I1Q8NGQ6 314 aa12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 STK35Q8TDR2 534 aa12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 IGFBPL1Q8WX77 278 aa12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 SPDL1Q96EA4 605 aa12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 TMEM19Q96HH6 336 aa12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 MAGEB18Q96M61 343 aa12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 MUS81Q96NY9 551 aa12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 TAPBPLQ9BX59 468 aa12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 GRIP2Q9C0E4 1043 aa12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 OR11A1Q9GZK7 315 aa12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 C12orf10Q9HB07 376 aa12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 ZNF701Q9NV72 531 aaPredicted RBP12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 RLIMQ9NVW2 624 aa12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 TAS2R16Q9NYV7 291 aa12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 MALT1Q9UDY8 824 aa12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 TRIM33Q9UPN9 1127 aa12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 MGAT4BQ9UQ53 548 aa12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 ZNF443Q9Y2A4 671 aaPredicted RBP12.85□□□□□ -0.35
NIF3L1-205ENST00000409588 NIPBLQ6KC79 2804 aaeCLIP12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 A0A1W2PP18 115 aa12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 TMEM72A0PK05 275 aa12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 OR6C65A6NJZ3 312 aa12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 OR5H1A6NKK0 313 aa12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 NCF2P19878 526 aaPredicted RBP12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 CCNA2P20248 432 aa12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 IGHV1-2P23083 117 aa12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 IDUAP35475 653 aa12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 SLC17A1Q14916 467 aa12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 ETFDHQ16134 617 aa12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 Q5PR19 223 aa12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 METTL21CQ5VZV1 264 aa12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 REEP3Q6NUK4 255 aa12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 KLHL17Q6TDP4 642 aa12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 ZNF836Q6ZNA1 936 aa12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 VRK2Q86Y07 508 aa12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 FUNDC1Q8IVP5 155 aa12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 TSPEARQ8WU66 669 aa12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 AKAP1Q92667 903 aaKnown RBP eCLIP12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 FBXW5Q969U6 566 aa12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 GTPBP3Q969Y2 492 aaKnown RBP12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 TMEM45BQ96B21 275 aa12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 SLCO1B3Q9NPD5 702 aa12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 FAIMQ9NVQ4 179 aa12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 CCDC167Q9P0B6 97 aa12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 PRSS50Q9UI38 385 aa12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 DCTN4Q9UJW0 460 aa12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 C2CD3Q4AC94 2353 aa12.84□□□□□ -0.35
NIF3L1-205ENST00000409588 NF1P21359 2839 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 CIB4A0PJX0 185 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 PRORSD1PA6NEY8 169 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 LIPT2A6NK58 231 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 ST8SIA5O15466 376 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 SERPINB7O75635 380 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 LYZL6O75951 148 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 INHBBP09529 407 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 GKN3PP0CG01 181 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 IMPDH2P12268 514 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 HOXB9P17482 250 aaPredicted RBP12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 GPX2P18283 190 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 PTAFRP25105 342 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 PRKAR1BP31321 381 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 SQLEQ14534 574 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 TTMPQ5BVD1 217 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 TMEM225Q6GV28 225 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 SLC2A7Q6PXP3 512 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 TMEM108Q6UXF1 575 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 ABHD12BQ7Z5M8 362 aaPredicted RBP12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 NET1Q7Z628 596 aaPredicted RBP12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 HMGN2P46Q86SG4 172 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 CCDC103Q8IW40 242 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 CLIP4Q8N3C7 705 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 C17orf78Q8N4C9 275 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 LSMEM1Q8N8F7 131 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 POMGNT2Q8NAT1 580 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 C1orf162Q8NEQ5 155 aaPredicted RBP12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 CKAP2Q8WWK9 683 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 TRMT61AQ96FX7 289 aaKnown RBP12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 AURKBQ96GD4 344 aaPredicted RBP12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 BOD1Q96IK1 185 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 ZNF607Q96SK3 696 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 TMEM38AQ9H6F2 299 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 SLC52A3Q9NQ40 469 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 UPB1Q9UBR1 384 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 FLVCR1Q9Y5Y0 555 aa12.83□□□□□ -0.36
NIF3L1-205ENST00000409588 AQP7P3A6NL99 342 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms