RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 SLC6A11P48066 632 aa9.83□□□□□ -0.84
NIF3L1-204ENST00000409357 RPIAP49247 311 aa9.83□□□□□ -0.84
NIF3L1-204ENST00000409357 CDH4P55283 916 aa9.83□□□□□ -0.84
NIF3L1-204ENST00000409357 RAB8AP61006 207 aa9.83□□□□□ -0.84
NIF3L1-204ENST00000409357 UBE2IP63279 158 aaKnown RBP9.83□□□□□ -0.84
NIF3L1-204ENST00000409357 HBA1P69905 142 aa9.83□□□□□ -0.84
NIF3L1-204ENST00000409357 ARHGEF7Q14155 803 aa9.83□□□□□ -0.84
NIF3L1-204ENST00000409357 PTPRRQ15256 657 aa9.83□□□□□ -0.84
NIF3L1-204ENST00000409357 ZNF805Q5CZA5 627 aa9.83□□□□□ -0.84
NIF3L1-204ENST00000409357 LPCAT3Q6P1A2 487 aa9.83□□□□□ -0.84
NIF3L1-204ENST00000409357 TMEM88Q6PEY1 159 aa9.83□□□□□ -0.84
NIF3L1-204ENST00000409357 KLBQ86Z14 1044 aa9.83□□□□□ -0.84
NIF3L1-204ENST00000409357 CBLN2Q8IUK8 224 aa9.83□□□□□ -0.84
NIF3L1-204ENST00000409357 ZFP41Q8N8Y5 198 aa9.83□□□□□ -0.84
NIF3L1-204ENST00000409357 WBP2Q969T9 261 aa9.83□□□□□ -0.84
NIF3L1-204ENST00000409357 PKP4Q99569 1192 aa9.83□□□□□ -0.84
NIF3L1-204ENST00000409357 OR10A4Q9H209 315 aa9.83□□□□□ -0.84
NIF3L1-204ENST00000409357 LMAN1LQ9HAT1 526 aa9.83□□□□□ -0.84
NIF3L1-204ENST00000409357 PRM3Q9NNZ6 103 aa9.83□□□□□ -0.84
NIF3L1-204ENST00000409357 PRMT8Q9NR22 394 aaPredicted RBP9.83□□□□□ -0.84
NIF3L1-204ENST00000409357 FXYD6-FXYD2A0A087WZ82 144 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 MGAT4DA6NG13 374 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 LEFTY2O00292 366 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 SLC31A2O15432 143 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 COCHO43405 550 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 VEGFDO43915 354 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 TBX19O60806 448 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 SLC25A14O95258 325 aaPredicted RBP9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 POP4O95707 220 aaKnown RBP9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 TBX18O95935 607 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 IGF2P01344 180 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 MT-ND4LP03901 98 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 ANXA4P09525 319 aaPredicted RBP9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 ALPIP09923 528 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 EPXP11678 715 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 MUC1P15941 1255 aaPredicted RBP9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 FPR3P25089 353 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 CERS1P27544 350 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 ABCD3P28288 659 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 TIA1P31483 386 aaKnown RBP eCLIP9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 FAUP35544 74 aaKnown RBP9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 HTR5AP47898 357 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 NAAAQ02083 359 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 MESP2Q0VG99 397 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 ILF3Q12906 894 aaKnown RBP eCLIP9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 TSPAN31Q12999 210 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 RUNX3Q13761 415 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 CCINQ13939 588 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 ITPRIPL2Q3MIP1 535 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 GRHL2Q6ISB3 625 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 H3F3CQ6NXT2 135 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 JMJD6Q6NYC1 403 aaPredicted RBP9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 PODNL1Q6PEZ8 512 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 RBMS3Q6XE24 437 aaKnown RBP9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 TMPRSS11FQ6ZWK6 438 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 OR2W3Q7Z3T1 314 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 NAA40Q86UY6 237 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 GID4Q8IVV7 300 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 ACBD7Q8N6N7 88 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 POMGNT2Q8NAT1 580 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 OR1J4Q8NGS1 313 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 STOML3Q8TAV4 291 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 ABHD4Q8TB40 342 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 FCAMRQ8WWV6 532 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 ARL11Q969Q4 196 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 PPP1R16AQ96I34 528 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 CNTNAP3BQ96NU0 1288 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 ELF4Q99607 663 aaPredicted RBP9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 EBPLQ9BY08 206 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 FXYD6Q9H0Q3 95 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 MIEF1Q9NQG6 463 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 GHRLQ9UBU3 117 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 FLVCR2Q9UPI3 526 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 MRPS17Q9Y2R5 130 aaKnown RBP9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 EML5Q05BV3 1969 aa9.82□□□□□ -0.84
NIF3L1-204ENST00000409357 NUP214P35658 2090 aaPredicted RBP9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 KANTRA0A1W2PQU2 76 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 ACOD1A6NK06 481 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 PROB1E7EW31 1015 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 FAM227AF5H4B4 570 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 GATBO75879 557 aaKnown RBP9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 ARL6IP5O75915 188 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 SPDEFO95238 335 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 RAB40ALP0C0E4 278 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 TDGF1P13385 188 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 LAP3P28838 519 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 TRHRP34981 398 aaPredicted RBP9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 GJA4P35212 333 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 H2BFSP57053 126 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 TBX4P57082 545 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 SLC7A9P82251 487 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 TMEM115Q12893 351 aaPredicted RBP9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 GAB4Q2WGN9 574 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 ATPAF1Q5TC12 328 aaPredicted RBP9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 SFRP4Q6FHJ7 346 aaPredicted RBP9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 FBXL22Q6P050 247 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 DRAM2Q6UX65 266 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 PARGQ86W56 976 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 SERPINA9Q86WD7 417 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 C1QL4Q86Z23 238 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms