RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 PDSS1Q5T2R2 415 aa11.98□□□□□ -0.49
PTPRN-202ENST00000409251 PRAMEF13Q5VWM6 474 aa11.98□□□□□ -0.49
PTPRN-202ENST00000409251 PDXPQ96GD0 296 aa11.98□□□□□ -0.49
PTPRN-202ENST00000409251 NKX6-2Q9C056 277 aaPredicted RBP11.98□□□□□ -0.49
PTPRN-202ENST00000409251 GPN1Q9HCN4 374 aaPredicted RBP11.98□□□□□ -0.49
PTPRN-202ENST00000409251 TRBV2A0A0J9YWF9 115 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 FCMRO60667 390 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 PNLIPRP1P54315 467 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 ZNF155Q12901 538 aaPredicted RBP11.97□□□□□ -0.49
PTPRN-202ENST00000409251 SHISA5Q8N114 240 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 SLC44A3Q8N4M1 653 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 RFLNBQ8N5W9 214 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 TMIEQ8NEW7 156 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 OR10Z1Q8NGY1 313 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 INSM2Q96T92 566 aaPredicted RBP11.97□□□□□ -0.49
PTPRN-202ENST00000409251 PINK1Q9BXM7 581 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 ENKD1Q9H0I2 346 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 FGF22Q9HCT0 170 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 NIT2Q9NQR4 276 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 PRELID3BQ9Y3B1 194 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 IDSB3KWA1 339 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 F8W036 122 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 EML2O95834 649 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 SULT1A3P0DMM9 295 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 SULT1A4P0DMN0 295 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 FGF9P31371 208 aaPredicted RBP11.97□□□□□ -0.49
PTPRN-202ENST00000409251 CTHP32929 405 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 ACTR1BP42025 376 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 PCBP3P57721 371 aaKnown RBP11.97□□□□□ -0.49
PTPRN-202ENST00000409251 ACTR1AP61163 376 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 BLOC1S1P78537 153 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 BTN2A1Q7KYR7 527 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 TMEFF1Q8IYR6 380 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 CMTM4Q8IZR5 234 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 CASTOR1Q8WTX7 329 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 EXO5Q9H790 373 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 OR2S2Q9NQN1 319 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 AHSPQ9NZD4 102 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 C2orf16Q68DN1 1984 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 TTC28Q96AY4 2481 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 TCRBV21S2A2A0A5A6 115 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 H0YIV9 168 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 NPC1O15118 1278 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 SUSD5O60279 629 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 LIMS1P48059 325 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 SEC61A1P61619 476 aaKnown RBP11.97□□□□□ -0.49
PTPRN-202ENST00000409251 PCGF3Q3KNV8 242 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 PAN3Q58A45 887 aaKnown RBP11.97□□□□□ -0.49
PTPRN-202ENST00000409251 FOXRED2Q8IWF2 684 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 OR4K13Q8NH42 304 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 THAP6Q8TBB0 222 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 ATOH1Q92858 354 aaPredicted RBP11.97□□□□□ -0.49
PTPRN-202ENST00000409251 SLC25A28Q96A46 364 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 ZNF75AQ96N20 296 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 DMRTA2Q96SC8 542 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 MED18Q9BUE0 208 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 ACTR6Q9GZN1 396 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 HRASLSQ9HDD0 168 aa11.97□□□□□ -0.49
PTPRN-202ENST00000409251 C7orf66A4D0T2 115 aa11.96□□□□□ -0.49
PTPRN-202ENST00000409251 LRIT2A6NDA9 550 aa11.96□□□□□ -0.49
PTPRN-202ENST00000409251 D6RAR5 112 aa11.96□□□□□ -0.49
PTPRN-202ENST00000409251 DOK2O60496 412 aa11.96□□□□□ -0.49
PTPRN-202ENST00000409251 CHRM4P08173 479 aa11.96□□□□□ -0.49
PTPRN-202ENST00000409251 MPC1LP0DKB6 136 aa11.96□□□□□ -0.49
PTPRN-202ENST00000409251 TRHRP34981 398 aaPredicted RBP11.96□□□□□ -0.49
PTPRN-202ENST00000409251 RPL4P36578 427 aaKnown RBP11.96□□□□□ -0.49
PTPRN-202ENST00000409251 UBE2IP63279 158 aaKnown RBP11.96□□□□□ -0.49
PTPRN-202ENST00000409251 PITPNAQ00169 270 aa11.96□□□□□ -0.49
PTPRN-202ENST00000409251 SERTAD2Q14140 314 aa11.96□□□□□ -0.49
PTPRN-202ENST00000409251 EOGTQ5NDL2 527 aa11.96□□□□□ -0.49
PTPRN-202ENST00000409251 FAM71E1Q6IPT2 247 aa11.96□□□□□ -0.49
PTPRN-202ENST00000409251 SEZ6L2Q6UXD5 910 aa11.96□□□□□ -0.49
PTPRN-202ENST00000409251 C17orf64Q86WR6 236 aa11.96□□□□□ -0.49
PTPRN-202ENST00000409251 POGLUT1Q8NBL1 392 aa11.96□□□□□ -0.49
PTPRN-202ENST00000409251 BPIFCQ8NFQ6 507 aa11.96□□□□□ -0.49
PTPRN-202ENST00000409251 FANK1Q8TC84 345 aa11.96□□□□□ -0.49
PTPRN-202ENST00000409251 SLC22A8Q8TCC7 542 aa11.96□□□□□ -0.49
PTPRN-202ENST00000409251 DPYSL5Q9BPU6 564 aa11.96□□□□□ -0.49
PTPRN-202ENST00000409251 PTDSS2Q9BVG9 487 aa11.96□□□□□ -0.49
PTPRN-202ENST00000409251 CYP8B1Q9UNU6 501 aa11.96□□□□□ -0.49
PTPRN-202ENST00000409251 DNAJC13O75165 2243 aa11.96□□□□□ -0.49
PTPRN-202ENST00000409251 PRSS44E7EML9 344 aa11.96□□□□□ -0.5
PTPRN-202ENST00000409251 F5H0A9 414 aaPredicted RBP11.96□□□□□ -0.5
PTPRN-202ENST00000409251 PLPP1O14494 284 aa11.96□□□□□ -0.5
PTPRN-202ENST00000409251 CDC42EP2O14613 210 aa11.96□□□□□ -0.5
PTPRN-202ENST00000409251 B4GALT2O60909 372 aa11.96□□□□□ -0.5
PTPRN-202ENST00000409251 SERPINA3P01011 423 aa11.96□□□□□ -0.5
PTPRN-202ENST00000409251 NTSR1P30989 418 aa11.96□□□□□ -0.5
PTPRN-202ENST00000409251 METTL11BQ5VVY1 283 aa11.96□□□□□ -0.5
PTPRN-202ENST00000409251 TMEM92Q6UXU6 159 aa11.96□□□□□ -0.5
PTPRN-202ENST00000409251 IKBIPQ70UQ0 350 aa11.96□□□□□ -0.5
PTPRN-202ENST00000409251 C10orf53Q8N6V4 93 aa11.96□□□□□ -0.5
PTPRN-202ENST00000409251 ANKRD53Q8N9V6 530 aa11.96□□□□□ -0.5
PTPRN-202ENST00000409251 PAQR8Q8TEZ7 354 aa11.96□□□□□ -0.5
PTPRN-202ENST00000409251 FCAMRQ8WWV6 532 aa11.96□□□□□ -0.5
PTPRN-202ENST00000409251 CA14Q9ULX7 337 aa11.96□□□□□ -0.5
PTPRN-202ENST00000409251 MFSD2BA6NFX1 497 aa11.96□□□□□ -0.5
PTPRN-202ENST00000409251 LINC00587B1AMM8 73 aa11.96□□□□□ -0.5
PTPRN-202ENST00000409251 MCRIP1C9JLW8 97 aa11.96□□□□□ -0.5
PTPRN-202ENST00000409251 NDUFV2P19404 249 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms