RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 RAD1O60671 282 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 SCGB1D1O95968 90 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 JMJD7P0C870 316 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 NTSR1P30989 418 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 MAGEB1P43366 347 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 PRLHRP49683 370 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 CTSL3PQ5NE16 218 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 HIST2H3AQ71DI3 136 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 LIX1LQ8IVB5 337 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 ABHD5Q8WTS1 349 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 ZNF480Q8WV37 535 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 SLC35B4Q969S0 331 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 UHRF2Q96PU4 802 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 TMEM38AQ9H6F2 299 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 LIN7BQ9HAP6 207 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 CSNK1G1Q9HCP0 422 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 SLC9B1P1A6NJY1 282 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 CSO75390 466 aaKnown RBP12.1□□□□□ -0.47
RNF43-201ENST00000407977 GYPBP06028 91 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 LIPCP11150 499 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 HTR2CP28335 458 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 SPOCK1Q08629 439 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 YIF1BQ5BJH7 314 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 RTP2Q5QGT7 225 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 KCNG3Q8TAE7 436 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 DOK4Q8TEW6 326 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 CTRCQ99895 268 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 GALNT9Q9HCQ5 603 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 PLEK2Q9NYT0 353 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 KPTNQ9Y664 436 aa12.1□□□□□ -0.47
RNF43-201ENST00000407977 A0A0B4J2A0 478 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 ANKRD30BLA7E2S9 258 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 C17orf105B2RV13 164 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 NCR1O76036 304 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 KCNK5O95279 499 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 GIPP09681 153 aaPredicted RBP12.09□□□□□ -0.47
RNF43-201ENST00000407977 CSNK1A1P48729 337 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 HBG1P69891 147 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 HBG2P69892 147 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 ZNF74Q16587 644 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 STEAP1BQ6NZ63 245 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 ZNF534Q76KX8 674 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 NPRL2Q8WTW4 380 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 MZB1Q8WU39 189 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 SHPKQ9UHJ6 478 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 FER1L4A9Z1Z3 1794 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 TRABD2BA6NFA1 517 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 ARGFXA6NJG6 315 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 C1orf105O95561 183 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 PCSK6P29122 969 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 CDC20Q12834 499 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 LEXMQ3ZCV2 418 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 NDUFAF7Q7L592 441 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 DPY19L4Q7Z388 723 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 VRK2Q86Y07 508 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 GMLQ99445 158 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 PAAF1Q9BRP4 392 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 METTL9Q9H1A3 318 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 C20orf85Q9H1P6 137 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 NOX4Q9NPH5 578 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 IFT172Q9UG01 1749 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 C17orf112F2Z3M2 114 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 J3KTA2 159 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 ATXN1LP0C7T5 689 aaKnown RBP12.09□□□□□ -0.47
RNF43-201ENST00000407977 GABRR1P24046 479 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 PCBD1P61457 104 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 SLC9A3R2Q15599 337 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 FBXW12Q6X9E4 464 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 Q6ZPB1 254 aaPredicted RBP12.09□□□□□ -0.47
RNF43-201ENST00000407977 RSPRY1Q96DX4 576 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 DTD2Q96FN9 168 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 LRRC46Q96FV0 321 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 DUS3LQ96G46 650 aaKnown RBP12.09□□□□□ -0.47
RNF43-201ENST00000407977 CMSS1Q9BQ75 279 aaKnown RBP12.09□□□□□ -0.47
RNF43-201ENST00000407977 A4GALTQ9NPC4 353 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 CPMP14384 443 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 GPX2P18283 190 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 LIPAP38571 399 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 SEC22CQ9BRL7 303 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 SUSD2Q9UGT4 822 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 PIK3C2AO00443 1686 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 TCRBV21S2A2A0A5A6 115 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 TMEM129A0AVI4 362 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 GPR75O95800 540 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 IDUAP35475 653 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 HCCSP53701 268 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 SEC61A1P61619 476 aaKnown RBP12.09□□□□□ -0.47
RNF43-201ENST00000407977 TCEAL8Q8IYN2 117 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 SLC38A5Q8WUX1 472 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 CHTF18Q8WVB6 975 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 OR5M11Q96RB7 305 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 RTP3Q9BQQ7 232 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 MUTYHQ9UIF7 546 aa12.09□□□□□ -0.47
RNF43-201ENST00000407977 HEPACAM2A8MVW5 462 aa12.08□□□□□ -0.48
RNF43-201ENST00000407977 IGHG1P01857 330 aa12.08□□□□□ -0.48
RNF43-201ENST00000407977 FPR3P25089 353 aa12.08□□□□□ -0.48
RNF43-201ENST00000407977 HOXC13P31276 330 aa12.08□□□□□ -0.48
RNF43-201ENST00000407977 SF3B4Q15427 424 aaKnown RBP eCLIP12.08□□□□□ -0.482e-6■■□□□ 14.5
RNF43-201ENST00000407977 PDLIM3Q53GG5 364 aaPredicted RBP12.08□□□□□ -0.48
RNF43-201ENST00000407977 OR10K2Q6IF99 312 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms