RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 CHRNB3Q05901 458 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 DPYSL2Q16555 572 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 C1orf220Q5T0J3 134 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 ENPP6Q6UWR7 440 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 TFAP2EQ6VUC0 442 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 SLC26A11Q86WA9 606 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 NBPF5PQ86XG9 351 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 SLC22A9Q8IVM8 553 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 CDH26Q8IXH8 852 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 C11orf53Q8IXP5 236 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 SPAG16Q8N0X2 631 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 OR1L6Q8NGR2 347 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 MAGEE2Q8TD90 523 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 DCUN1D4Q92564 292 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 NT5C3BQ969T7 300 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 OXGR1Q96P68 337 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 PANX2Q96RD6 677 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 TSG101Q99816 390 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 MRPL45Q9BRJ2 306 aaKnown RBP2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 TCHPQ9BT92 498 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 PARD6BQ9BYG5 372 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 ACTR6Q9GZN1 396 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 EHD1Q9H4M9 534 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 REEP4Q9H6H4 257 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 AZI2Q9H6S1 392 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 ISG20L2Q9H9L3 353 aaKnown RBP2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 SGK2Q9HBY8 427 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 CD274Q9NZQ7 290 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 TRAF3IP3Q9Y228 551 aa2.78□□□□□ -1.96
HMGB1P17-201ENST00000403495 PLEKHH1Q9ULM0 1364 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 A0A0J9YXY3 114 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 IQANK1A0A1B0GTG1 560 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 FAM231BA6NCW3 169 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 A8MXQ7 604 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 HSD17B6O14756 317 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 ECI2O75521 394 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 TSPAN12O95859 305 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 UQCRFS1P1P0C7P4 283 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 ETS2P15036 469 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 NCF2P19878 526 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 CXCR2P25025 360 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 CALCRP30988 508 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 HNRNPH3P31942 346 aaKnown RBP2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 UGT1A5P35504 534 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 SULT1E1P49888 294 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 CSNK1G2P78368 415 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 ZNF45Q02386 682 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 OXA1LQ15070 435 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 ZNF630Q2M218 657 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 KLHL38Q2WGJ6 581 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 CFAP221Q4G0U5 840 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 PRR30Q53SZ7 412 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 CCDC183Q5T5S1 534 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 PPP1R27Q86WC6 154 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 TRIM69Q86WT6 500 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 VRK2Q86Y07 508 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 ZNF100Q8IYN0 542 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 C6orf223Q8N319 242 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 FTMTQ8N4E7 242 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 ACOT4Q8N9L9 421 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 AKR7LQ8NHP1 331 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 RNF139Q8WU17 664 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 HTR3CQ8WXA8 447 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 UFD1Q92890 307 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 CXorf40BQ96DE9 158 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 NUS1Q96E22 293 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 CNDP1Q96KN2 507 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 TECTBQ96PL2 329 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 NUDT15Q9NV35 164 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 MARCH5Q9NX47 278 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 SUN2Q9UH99 717 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 SLC7A8Q9UHI5 535 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 COPS3Q9UNS2 423 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 KCNIP3Q9Y2W7 256 aa2.77□□□□□ -1.97
HMGB1P17-201ENST00000403495 RBMY1BA6NDE4 496 aaKnown RBP2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 RBMY1EA6NEQ0 496 aaKnown RBP2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 HAS3O00219 553 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 HDAC3O15379 428 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 UGT1A9O60656 530 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 TOM1O60784 492 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 LY6G6DO95868 133 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 RBMY1DP0C7P1 496 aaKnown RBP2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 RBMY1A1P0DJD3 496 aaKnown RBP2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 ATP1B2P14415 290 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 PLK1P53350 603 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 APOC4P55056 127 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 ACTR3P61158 418 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 SELENOTP62341 195 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 GK3PQ14409 553 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 ARL6IP1Q15041 203 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 KLF17Q5JT82 389 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 METTL11BQ5VVY1 283 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 WDR74Q6RFH5 385 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 ZYG11AQ6WRX3 759 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 SCARA5Q6ZMJ2 495 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 Q6ZN92 141 aa2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 ZNF571Q7Z3V5 609 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 C14orf178Q8N769 122 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P17-201ENST00000403495 BBS1Q8NFJ9 593 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms