RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 MT-ND5P03915 603 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 ALAS2P22557 587 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 CAPZA2P47755 286 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 CLDN20P56880 219 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 PRTGQ2VWP7 1150 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 TRMT12Q53H54 448 aaKnown RBP14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 TRILQ7L0X0 811 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 LIX1LQ8IVB5 337 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 GPALPP1Q8IXQ4 340 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 PFN4Q8NHR9 129 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 KISS1RQ969F8 398 aaPredicted RBP14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 NACC2Q96BF6 587 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 LIN37Q96GY3 246 aaPredicted RBP14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 TMEM246Q9BRR3 403 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 ADAP2Q9NPF8 381 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 POLE3Q9NRF9 147 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 OCIAD1Q9NX40 245 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 PAQR5Q9NXK6 330 aaPredicted RBP14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 AKAP7Q9P0M2 348 aaPredicted RBP14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 PRR23D1E9PI22 279 aaPredicted RBP14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 SCO2O43819 266 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 SLC43A1O75387 559 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 OR2B3O76000 313 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 GKN3PP0CG01 181 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 PRR23D2P0DMB1 279 aaPredicted RBP14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 PTNP21246 168 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 CLDN6P56747 220 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 TAS2R43P59537 309 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 SHC2P98077 582 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 COL9A2Q14055 689 aaPredicted RBP14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 IL11RAQ14626 422 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 TMPRSS12Q86WS5 348 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 LRRC28Q86X40 367 aaPredicted RBP14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 ARHGEF39Q8N4T4 335 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 OR5W2Q8NH69 310 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 OR1L3Q8NH93 324 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 FYTTD1Q96QD9 318 aaKnown RBP14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 OR6C1Q96RD1 312 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 TIMP4Q99727 224 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 NDC1Q9BTX1 674 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 SPRTNQ9H040 489 aaPredicted RBP14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 MED20Q9H944 212 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 STARD5Q9NSY2 213 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 C20orf141Q9NUB4 165 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 BAIAP2Q9UQB8 552 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 MED31Q9Y3C7 131 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 ALG5Q9Y673 324 aa14.62□□□□□ -0.07
CHRFAM7A-203ENST00000401522 CFAP54Q96N23 3096 aa14.61□□□□□ -0.07
CHRFAM7A-203ENST00000401522 TTC36A6NLP5 189 aa14.61□□□□□ -0.07
CHRFAM7A-203ENST00000401522 RIIAD1A6NNX1 92 aa14.61□□□□□ -0.07
CHRFAM7A-203ENST00000401522 EFCAB7A8K855 629 aa14.61□□□□□ -0.07
CHRFAM7A-203ENST00000401522 ORC5O43913 435 aa14.61□□□□□ -0.07
CHRFAM7A-203ENST00000401522 ELK1P19419 428 aa14.61□□□□□ -0.07
CHRFAM7A-203ENST00000401522 CTBP2P56545 445 aa14.61□□□□□ -0.07
CHRFAM7A-203ENST00000401522 CD83Q01151 205 aa14.61□□□□□ -0.07
CHRFAM7A-203ENST00000401522 FOXK2Q01167 660 aa14.61□□□□□ -0.07
CHRFAM7A-203ENST00000401522 MC2RQ01718 297 aa14.61□□□□□ -0.07
CHRFAM7A-203ENST00000401522 IDNKQ5T6J7 187 aa14.61□□□□□ -0.07
CHRFAM7A-203ENST00000401522 ZNF613Q6PF04 617 aa14.61□□□□□ -0.07
CHRFAM7A-203ENST00000401522 UTS2BQ765I0 119 aa14.61□□□□□ -0.07
CHRFAM7A-203ENST00000401522 OR10H4Q8NGA5 316 aa14.61□□□□□ -0.07
CHRFAM7A-203ENST00000401522 OR5M3Q8NGP4 307 aa14.61□□□□□ -0.07
CHRFAM7A-203ENST00000401522 SLC2A12Q8TD20 617 aa14.61□□□□□ -0.07
CHRFAM7A-203ENST00000401522 ADAMTS14Q8WXS8 1223 aa14.61□□□□□ -0.07
CHRFAM7A-203ENST00000401522 BPIFA2Q96DR5 249 aa14.61□□□□□ -0.07
CHRFAM7A-203ENST00000401522 ZNF559Q9BR84 538 aa14.61□□□□□ -0.07
CHRFAM7A-203ENST00000401522 MARVELD1Q9BSK0 173 aa14.61□□□□□ -0.07
CHRFAM7A-203ENST00000401522 IFT27Q9BW83 186 aa14.61□□□□□ -0.07
CHRFAM7A-203ENST00000401522 CYSLTR2Q9NS75 346 aa14.61□□□□□ -0.07
CHRFAM7A-203ENST00000401522 EXTL2Q9UBQ6 330 aa14.61□□□□□ -0.07
CHRFAM7A-203ENST00000401522 KCNE5Q9UJ90 142 aa14.61□□□□□ -0.07
CHRFAM7A-203ENST00000401522 SLC35A3Q9Y2D2 325 aa14.61□□□□□ -0.07
CHRFAM7A-203ENST00000401522 SIRT4Q9Y6E7 314 aaPredicted RBP14.61□□□□□ -0.07
CHRFAM7A-203ENST00000401522 B4E171 279 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 PEX12O00623 359 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 DNAJB6O75190 326 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 GPR75O95800 540 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 NT5EP21589 574 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 ERP29P30040 261 aaKnown RBP14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 TALDO1P37837 337 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 TSPAN7P41732 249 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 ID2Q02363 134 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 EIF3IQ13347 325 aaKnown RBP14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 GRM7Q14831 915 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 KLHL12Q53G59 568 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 B3GLCTQ6Y288 498 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 TPRA1Q86W33 373 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 GPR135Q8IZ08 494 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 SLC43A2Q8N370 569 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 SLC37A3Q8NCC5 494 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 NLGN4YQ8NFZ3 816 aaPredicted RBP14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 OR13C2Q8NGS9 318 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 ENKD1Q9H0I2 346 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 TMEM27Q9HBJ8 222 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 ATP13A2Q9NQ11 1180 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 DLL3Q9NYJ7 618 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 NLKQ9UBE8 527 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 RARRES3Q9UL19 164 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 SIGLEC7Q9Y286 467 aa14.6□□□□□ -0.07
CHRFAM7A-203ENST00000401522 ZC3H12DA2A288 527 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms