RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 IVDP26440 423 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 APOBEC3AP31941 199 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 CCKBRP32239 447 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 FOXN2P32314 431 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 GDNFP39905 211 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 EIF2S3P41091 472 aaKnown RBP4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 ACTR1BP42025 376 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 MAGEA3P43357 314 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 PRLHRP49683 370 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 CCNG1P51959 295 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 PDX1P52945 283 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 CTSCP53634 463 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 GNG11P61952 73 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 CXADRP78310 365 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 CYP4F2P78329 520 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 DR1Q01658 176 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 ZFP36L1Q07352 338 aaKnown RBP4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 SLC3A1Q07837 685 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 FOXM1Q08050 763 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 ITIH4Q14624 930 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 RBBP7Q16576 425 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 ISXQ2M1V0 245 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 EIF2S3LQ2VIR3 472 aaKnown RBP4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 PDCD4Q53EL6 469 aaKnown RBP4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 SYT14P1Q58G82 188 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 C6orf183Q5T699 404 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 LYPLAL1Q5VWZ2 237 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 LIPNQ5VXI9 398 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 GGNBP1Q5YKI7 109 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 LCN10Q6JVE6 187 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 OGFOD2Q6N063 350 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 CERS6Q6ZMG9 384 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 RBM44Q6ZP01 1051 aaKnown RBP4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 PATL1Q86TB9 770 aaKnown RBP4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 LRRC6Q86X45 466 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 SFTPA2Q8IWL1 248 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 PIANPQ8IYJ0 282 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 MICU2Q8IYU8 434 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 OR1L4Q8NGR5 311 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 OR2L2Q8NH16 312 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 M1APQ8TC57 530 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 MAPK15Q8TD08 544 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 SLC37A2Q8TED4 501 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 SLC44A1Q8WWI5 657 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 PATE1Q8WXA2 126 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 ELMO1Q92556 727 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 NRGNQ92686 78 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 ERGIC1Q969X5 290 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 ADIPOR1Q96A54 375 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 CIDECQ96AQ7 238 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 TMEM45BQ96B21 275 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 ZG16BQ96DA0 208 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 RAB39BQ96DA2 213 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 ZNF778Q96MU6 729 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 TSNARE1Q96NA8 513 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 TSSK2Q96PF2 358 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 COPS8Q99627 209 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 SLC29A1Q99808 456 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 CCDC3Q9BQI4 270 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 CENPKQ9BS16 269 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 ST6GALNAC5Q9BVH7 336 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 KIFC1Q9BW19 673 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 GATA5Q9BWX5 397 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 OR52A5Q9H2C5 316 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 LRRN3Q9H3W5 708 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 SLA2Q9H6Q3 261 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 ASB8Q9H765 288 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 LYRM4Q9HD34 91 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 TREX1Q9NSU2 369 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 GAR1Q9NY12 217 aaKnown RBP4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 SPHK1Q9NYA1 384 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 BFARQ9NZS9 450 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 BCAP29Q9UHQ4 241 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 ADAM29Q9UKF5 820 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 ACSL5Q9ULC5 683 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 SH2B3Q9UQQ2 575 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 TCAF1Q9Y4C2 921 aa4.84□□□□□ -1.63
HMGB3P7-201ENST00000400214 LOC105371242A0A075B767 164 aa4.83□□□□□ -1.64
HMGB3P7-201ENST00000400214 IGHV1OR21-1A0A087WYE8 117 aa4.83□□□□□ -1.64
HMGB3P7-201ENST00000400214 TRAV24A0A0B4J272 114 aa4.83□□□□□ -1.64
HMGB3P7-201ENST00000400214 GOLGA8QA0A0J9YX86 632 aa4.83□□□□□ -1.64
HMGB3P7-201ENST00000400214 A0A1W2PNU3 283 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P7-201ENST00000400214 CCDC162PA2VCL2 907 aa4.83□□□□□ -1.64
HMGB3P7-201ENST00000400214 TRABD2BA6NFA1 517 aa4.83□□□□□ -1.64
HMGB3P7-201ENST00000400214 MGAT4DA6NG13 374 aa4.83□□□□□ -1.64
HMGB3P7-201ENST00000400214 TUBAL3A6NHL2 446 aa4.83□□□□□ -1.64
HMGB3P7-201ENST00000400214 LILRA5A6NI73 299 aa4.83□□□□□ -1.64
HMGB3P7-201ENST00000400214 TMEM150CB9EJG8 249 aa4.83□□□□□ -1.64
HMGB3P7-201ENST00000400214 D6RAR5 112 aa4.83□□□□□ -1.64
HMGB3P7-201ENST00000400214 GLRA3O75311 464 aa4.83□□□□□ -1.64
HMGB3P7-201ENST00000400214 POP7O75817 140 aaKnown RBP4.83□□□□□ -1.64
HMGB3P7-201ENST00000400214 MYO1DO94832 1006 aa4.83□□□□□ -1.64
HMGB3P7-201ENST00000400214 H6PDO95479 791 aa4.83□□□□□ -1.64
HMGB3P7-201ENST00000400214 TSPAN12O95859 305 aa4.83□□□□□ -1.64
HMGB3P7-201ENST00000400214 CST1P01037 141 aa4.83□□□□□ -1.64
HMGB3P7-201ENST00000400214 TGFB1P01137 390 aa4.83□□□□□ -1.64
HMGB3P7-201ENST00000400214 RPLP0P05388 317 aaKnown RBP4.83□□□□□ -1.64
HMGB3P7-201ENST00000400214 NAGAP17050 411 aa4.83□□□□□ -1.64
HMGB3P7-201ENST00000400214 TCN1P20061 433 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P7-201ENST00000400214 MSH3P20585 1137 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms