RNA–Protein interactions for RNA: ENST00000399132.5

COL25A1-203, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL25A1, Length 2,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-203ENST00000399132 VN1R1Q9GZP7 353 aa13.77□□□□□ -0.2
COL25A1-203ENST00000399132 SSR3Q9UNL2 185 aa13.77□□□□□ -0.2
COL25A1-203ENST00000399132 TP53BP1Q12888 1972 aaPredicted RBP13.77□□□□□ -0.2
COL25A1-203ENST00000399132 C2orf92A0A1B0GVN3 265 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 MCIDASD6RGH6 385 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 SERTAD2Q14140 314 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 ZNF181Q2M3W8 571 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 LYPD4Q6UWN0 246 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 MRGPREQ86SM8 312 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 CCDC120Q96HB5 630 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 TRIM2Q9C040 744 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 MCCC2Q9HCC0 563 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 TIGARQ9NQ88 270 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 ZNF346Q9UL40 294 aaKnown RBP13.77□□□□□ -0.21
COL25A1-203ENST00000399132 STUB1Q9UNE7 303 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 CACNA1CQ13936 2221 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 CD8B2A6NJW9 211 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 PRR23D1E9PI22 279 aaPredicted RBP13.77□□□□□ -0.21
COL25A1-203ENST00000399132 NCR1O76036 304 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 UTS2O95399 124 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 PRR23D2P0DMB1 279 aaPredicted RBP13.77□□□□□ -0.21
COL25A1-203ENST00000399132 CD8BP10966 210 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 AZGP1P25311 298 aaKnown RBP13.77□□□□□ -0.21
COL25A1-203ENST00000399132 SOX6P35712 828 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 UGT2B10P36537 528 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 EPHA4P54764 986 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 MLLT11Q13015 90 aaPredicted RBP13.77□□□□□ -0.21
COL25A1-203ENST00000399132 HLA-BQ31612 363 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 TIMM50Q3ZCQ8 353 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 C3orf38Q5JPI3 329 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 NXNL2Q5VZ03 156 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 ULK3Q6PHR2 472 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 GDPD3Q7L5L3 318 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 MARCH3Q86UD3 253 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 D2HGDHQ8N465 521 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 RFLNBQ8N5W9 214 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 ZNF501Q96CX3 271 aaPredicted RBP13.77□□□□□ -0.21
COL25A1-203ENST00000399132 ZMYND19Q96E35 227 aaPredicted RBP13.77□□□□□ -0.21
COL25A1-203ENST00000399132 PCED1AQ9H1Q7 454 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 APMAPQ9HDC9 416 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 C14orf119Q9NWQ9 140 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 TXNL4BQ9NX01 149 aaKnown RBP13.77□□□□□ -0.21
COL25A1-203ENST00000399132 NDUFB11Q9NX14 153 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 ERVK13-1Q9NX77 482 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 COQ3Q9NZJ6 369 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 NPAP1Q9NZP6 1156 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 IER3IP1Q9Y5U9 82 aa13.77□□□□□ -0.21
COL25A1-203ENST00000399132 SCDO00767 359 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 RCBTB2O95199 551 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 DDAH2O95865 285 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 HMGN1P05114 100 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 SDC2P34741 201 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 CCL7P80098 99 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 TOMM34Q15785 309 aaPredicted RBP13.76□□□□□ -0.21
COL25A1-203ENST00000399132 SLC25A30Q5SVS4 291 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 PRPF38BQ5VTL8 546 aaKnown RBP13.76□□□□□ -0.21
COL25A1-203ENST00000399132 OTPQ5XKR4 325 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 NIPAL3Q6P499 406 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 RPTNQ6XPR3 784 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 C9orf40Q8IXQ3 194 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 RNF113BQ8IZP6 322 aaKnown RBP13.76□□□□□ -0.21
COL25A1-203ENST00000399132 ZNF563Q8TA94 476 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 BRIX1Q8TDN6 353 aaKnown RBP13.76□□□□□ -0.21
COL25A1-203ENST00000399132 ACOXLQ9NUZ1 547 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 PRODH2Q9UF12 536 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 NUP50Q9UKX7 468 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 ADAMTS9Q9P2N4 1935 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 A0A1W2PQM1 296 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 FAM86C2PA6NEL3 165 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 NPIPB9F8W1W9 429 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 PSMD9O00233 223 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 HCRTR2O43614 444 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 HIST1H1CP16403 213 aaKnown RBP13.76□□□□□ -0.21
COL25A1-203ENST00000399132 ATF4P18848 351 aaPredicted RBP13.76□□□□□ -0.21
COL25A1-203ENST00000399132 GRPRP30550 384 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 HTR1FP30939 366 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 RORAP35398 523 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 NAA10P41227 235 aaPredicted RBP13.76□□□□□ -0.21
COL25A1-203ENST00000399132 OR2B6P58173 313 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 FABP5Q01469 135 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 ZNF141Q15928 474 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 HLA-DQA1Q5Y7H0 255 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 TMPRSS11FQ6ZWK6 438 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 ZPLD1Q8TCW7 415 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 ZNF721Q8TF20 911 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 HOXB13Q92826 284 aaPredicted RBP13.76□□□□□ -0.21
COL25A1-203ENST00000399132 MMP27Q9H306 513 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 POLE3Q9NRF9 147 aa13.76□□□□□ -0.21
COL25A1-203ENST00000399132 MN1Q10571 1320 aaPredicted RBP13.75□□□□□ -0.21
COL25A1-203ENST00000399132 PCNX3Q9H6A9 2034 aa13.75□□□□□ -0.21
COL25A1-203ENST00000399132 TEX51A0A1B0GUA7 166 aa13.75□□□□□ -0.21
COL25A1-203ENST00000399132 ERVK-25P63136 954 aa13.75□□□□□ -0.21
COL25A1-203ENST00000399132 HNRNPA0Q13151 305 aaKnown RBP13.75□□□□□ -0.21
COL25A1-203ENST00000399132 C19orf48Q6RUI8 117 aa13.75□□□□□ -0.21
COL25A1-203ENST00000399132 ZNF550Q7Z398 422 aa13.75□□□□□ -0.21
COL25A1-203ENST00000399132 PARP16Q8N5Y8 322 aa13.75□□□□□ -0.21
COL25A1-203ENST00000399132 C3orf49Q96BT1 292 aa13.75□□□□□ -0.21
COL25A1-203ENST00000399132 RASD2Q96D21 266 aa13.75□□□□□ -0.21
COL25A1-203ENST00000399132 RNF170Q96K19 258 aa13.75□□□□□ -0.21
COL25A1-203ENST00000399132 CEP19Q96LK0 163 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms