RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 ZNF91Q05481 1191 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 Q499Y3 187 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 NDUFAF7Q7L592 441 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 ZNF610Q8N9Z0 462 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 OR11L1Q8NGX0 322 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 HAS2Q92819 552 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 DUS3LQ96G46 650 aaKnown RBP7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 PBX4Q9BYU1 374 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 SEMA4CQ9C0C4 833 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 LHX6Q9UPM6 363 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 ARRDC5A6NEK1 342 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 SERINC4A6NH21 518 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 C4orf47A7E2U8 309 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 EIF1BO60739 113 aaKnown RBP7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 CAPNS1P04632 268 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 CD53P19397 219 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 HOXD9P28356 352 aaPredicted RBP7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 PTPN6P29350 595 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 XCR1P46094 333 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 RBPJQ06330 500 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 SLC46A3Q7Z3Q1 461 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 CLEC1AQ8NC01 280 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 KCNG3Q8TAE7 436 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 THAP3Q8WTV1 239 aaPredicted RBP7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 SLC25A18Q9H1K4 315 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 C1orf198Q9H425 327 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 A0A1W2PQ09 198 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 E9PI62 339 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 SURF4O15260 269 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 LILRB5O75023 590 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 TK1P04183 234 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 EPHA1P21709 976 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 PLGLAQ15195 96 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 NKPD1Q17RQ9 610 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 SLC5A12Q1EHB4 618 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 DHRS4L2Q6PKH6 230 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.79□□□□□ -1.161e-6■■■□□ 16.2
SPTLC3-201ENST00000399002 HIST2H3AQ71DI3 136 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 WDR5BQ86VZ2 330 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 TP53INP2Q8IXH6 220 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 OR2T11Q8NH01 316 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 OR4K15Q8NH41 348 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 LILRB4Q8NHJ6 448 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 FBXO27Q8NI29 283 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 UCN3Q969E3 161 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 C3orf30Q96M34 536 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 UBL7Q96S82 380 aaPredicted RBP7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 CLSTN3Q9BQT9 956 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 TCEAL2Q9H3H9 227 aaPredicted RBP7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 ELOVL3Q9HB03 270 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 B3GAT1Q9P2W7 334 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 IL20RAQ9UHF4 553 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 HS3ST3A1Q9Y663 406 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 COL16A1Q07092 1604 aaPredicted RBP7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 COL22A1Q8NFW1 1626 aaPredicted RBP7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 TMEM82A0PJX8 343 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 DVL2O14641 736 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 PMS2P2O95744 297 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 CALCBP10092 127 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 CD79AP11912 226 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 DRD5P21918 477 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 GABRR1P24046 479 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 SLC1A3P43003 542 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 KCNJ10P78508 379 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 MOB3CQ70IA8 216 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 CMSS1Q9BQ75 279 aaKnown RBP7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 OCSTAMPQ9BR26 566 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 NGBQ9NPG2 151 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 CORINQ9Y5Q5 1042 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 IGLV3-10A0A075B6K4 115 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 TMEM269A0A1B0GVZ9 245 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 MSR1P21757 451 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 HTR2CP28335 458 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 FGFBP1Q14512 234 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 ZNF585AQ6P3V2 769 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 HMGN2P46Q86SG4 172 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 NAA40Q86UY6 237 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 SERPINA12Q8IW75 414 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 SLC22A24Q8N4F4 322 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 VN1R2Q8NFZ6 395 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 KHSRPQ92945 711 aaKnown RBP eCLIP7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 MS4A8Q9BY19 250 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 LIN7BQ9HAP6 207 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 PLEK2Q9NYT0 353 aa7.79□□□□□ -1.16
SPTLC3-201ENST00000399002 BTBD17A6NE02 478 aa7.78□□□□□ -1.16
SPTLC3-201ENST00000399002 TMEM221A6NGB7 291 aa7.78□□□□□ -1.16
SPTLC3-201ENST00000399002 GASTP01350 101 aa7.78□□□□□ -1.16
SPTLC3-201ENST00000399002 HLA-AP01891 365 aaKnown RBP7.78□□□□□ -1.16
SPTLC3-201ENST00000399002 GIFP27352 417 aa7.78□□□□□ -1.16
SPTLC3-201ENST00000399002 DDOSTP39656 456 aa7.78□□□□□ -1.16
SPTLC3-201ENST00000399002 TM4SF4P48230 202 aa7.78□□□□□ -1.16
SPTLC3-201ENST00000399002 IDH3GP51553 393 aaPredicted RBP7.78□□□□□ -1.16
SPTLC3-201ENST00000399002 HBG1P69891 147 aa7.78□□□□□ -1.16
SPTLC3-201ENST00000399002 HBG2P69892 147 aa7.78□□□□□ -1.16
SPTLC3-201ENST00000399002 TNK1Q13470 666 aa7.78□□□□□ -1.16
SPTLC3-201ENST00000399002 SLC36A2Q495M3 483 aa7.78□□□□□ -1.16
SPTLC3-201ENST00000399002 EMC4Q5J8M3 183 aa7.78□□□□□ -1.16
SPTLC3-201ENST00000399002 MARCH8Q5T0T0 291 aa7.78□□□□□ -1.16
SPTLC3-201ENST00000399002 UBE2UQ5VVX9 321 aa7.78□□□□□ -1.16
SPTLC3-201ENST00000399002 ELP2Q6IA86 826 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms