RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 ASRGL1Q7L266 308 aa22.78■■□□□ 1.24
U2AF1-203ENST00000398137 CHMP1BQ7LBR1 199 aa22.78■■□□□ 1.24
U2AF1-203ENST00000398137 RELL2Q8NC24 303 aaPredicted RBP22.78■■□□□ 1.24
U2AF1-203ENST00000398137 ELOA3Q8NG57 546 aa22.78■■□□□ 1.24
U2AF1-203ENST00000398137 OR10D3Q8NH80 312 aa22.78■■□□□ 1.24
U2AF1-203ENST00000398137 ZPLD1Q8TCW7 415 aa22.78■■□□□ 1.24
U2AF1-203ENST00000398137 PYURFQ96I23 114 aa22.78■■□□□ 1.24
U2AF1-203ENST00000398137 ZNF845Q96IR2 970 aaPredicted RBP22.78■■□□□ 1.24
U2AF1-203ENST00000398137 AMBRA1Q9C0C7 1298 aa22.78■■□□□ 1.24
U2AF1-203ENST00000398137 ZC3H12DA2A288 527 aaKnown RBP22.77■■□□□ 1.24
U2AF1-203ENST00000398137 TRAPPC13A5PLN9 417 aa22.77■■□□□ 1.24
U2AF1-203ENST00000398137 ADAMDEC1O15204 470 aa22.77■■□□□ 1.24
U2AF1-203ENST00000398137 CXCL13O43927 109 aa22.77■■□□□ 1.24
U2AF1-203ENST00000398137 CEACAM8P31997 349 aaPredicted RBP22.77■■□□□ 1.24
U2AF1-203ENST00000398137 YAP1P46937 504 aaKnown RBP22.77■■□□□ 1.24
U2AF1-203ENST00000398137 TAS2R41P59536 307 aa22.77■■□□□ 1.24
U2AF1-203ENST00000398137 RPS3AP61247 264 aaKnown RBP22.77■■□□□ 1.24
U2AF1-203ENST00000398137 TRAP1Q12931 704 aaKnown RBP22.77■■□□□ 1.24
U2AF1-203ENST00000398137 MTX3Q5HYI7 312 aa22.77■■□□□ 1.24
U2AF1-203ENST00000398137 SLC47A1Q96FL8 570 aa22.77■■□□□ 1.24
U2AF1-203ENST00000398137 ARL5BQ96KC2 179 aa22.77■■□□□ 1.24
U2AF1-203ENST00000398137 LRGUKQ96M69 825 aa22.77■■□□□ 1.24
U2AF1-203ENST00000398137 TRIM15Q9C019 465 aa22.77■■□□□ 1.24
U2AF1-203ENST00000398137 SLC7A8Q9UHI5 535 aa22.77■■□□□ 1.24
U2AF1-203ENST00000398137 TCRBV5S2A0A599 114 aa22.76■■□□□ 1.23
U2AF1-203ENST00000398137 ZNF208O43345 1280 aa22.76■■□□□ 1.23
U2AF1-203ENST00000398137 THY1P04216 161 aa22.76■■□□□ 1.23
U2AF1-203ENST00000398137 PNMTP11086 282 aa22.76■■□□□ 1.23
U2AF1-203ENST00000398137 PTNP21246 168 aa22.76■■□□□ 1.23
U2AF1-203ENST00000398137 PDSS1Q5T2R2 415 aa22.76■■□□□ 1.23
U2AF1-203ENST00000398137 PPP4R4Q6NUP7 873 aa22.76■■□□□ 1.23
U2AF1-203ENST00000398137 DDIT4LQ96D03 193 aa22.76■■□□□ 1.23
U2AF1-203ENST00000398137 C12orf10Q9HB07 376 aa22.76■■□□□ 1.23
U2AF1-203ENST00000398137 SLC7A7Q9UM01 511 aa22.76■■□□□ 1.23
U2AF1-203ENST00000398137 POMPQ9Y244 141 aa22.76■■□□□ 1.23
U2AF1-203ENST00000398137 DOCK7Q96N67 2140 aa22.75■■□□□ 1.23
U2AF1-203ENST00000398137 J3KTA2 159 aa22.75■■□□□ 1.23
U2AF1-203ENST00000398137 hCG_2039718K7EN88 272 aa22.75■■□□□ 1.23
U2AF1-203ENST00000398137 CHP2O43745 196 aa22.75■■□□□ 1.23
U2AF1-203ENST00000398137 LYPD3O95274 346 aa22.75■■□□□ 1.23
U2AF1-203ENST00000398137 SEMG1P04279 462 aa22.75■■□□□ 1.23
U2AF1-203ENST00000398137 PIN1Q13526 163 aaPredicted RBP22.75■■□□□ 1.23
U2AF1-203ENST00000398137 FLOT2Q14254 428 aa22.75■■□□□ 1.23
U2AF1-203ENST00000398137 SF3B4Q15427 424 aaKnown RBP eCLIP22.75■■□□□ 1.23
U2AF1-203ENST00000398137 SGCBQ16585 318 aa22.75■■□□□ 1.23
U2AF1-203ENST00000398137 SWT1Q5T5J6 900 aaKnown RBP22.75■■□□□ 1.23
U2AF1-203ENST00000398137 NSUN5P2Q63ZY6 315 aa22.75■■□□□ 1.23
U2AF1-203ENST00000398137 SLC38A4Q969I6 547 aa22.75■■□□□ 1.23
U2AF1-203ENST00000398137 SLC41A3Q96GZ6 507 aa22.75■■□□□ 1.23
U2AF1-203ENST00000398137 PRRC1Q96M27 445 aa22.75■■□□□ 1.23
U2AF1-203ENST00000398137 SRXN1Q9BYN0 137 aa22.75■■□□□ 1.23
U2AF1-203ENST00000398137 CLCF1Q9UBD9 225 aa22.75■■□□□ 1.23
U2AF1-203ENST00000398137 CELSR1Q9NYQ6 3014 aa22.74■■□□□ 1.23
U2AF1-203ENST00000398137 OR5F1O95221 314 aa22.74■■□□□ 1.23
U2AF1-203ENST00000398137 MAP2K6P52564 334 aa22.74■■□□□ 1.23
U2AF1-203ENST00000398137 CARD18P57730 90 aa22.74■■□□□ 1.23
U2AF1-203ENST00000398137 VLDLRP98155 873 aa22.74■■□□□ 1.23
U2AF1-203ENST00000398137 FOXD4Q12950 439 aaPredicted RBP22.74■■□□□ 1.23
U2AF1-203ENST00000398137 MYBPHQ13203 477 aa22.74■■□□□ 1.23
U2AF1-203ENST00000398137 SLC25A35Q3KQZ1 300 aa22.74■■□□□ 1.23
U2AF1-203ENST00000398137 WDR88Q6ZMY6 472 aa22.74■■□□□ 1.23
U2AF1-203ENST00000398137 TSEN54Q7Z6J9 526 aaKnown RBP22.74■■□□□ 1.23
U2AF1-203ENST00000398137 ADGRE4PQ86SQ3 457 aa22.74■■□□□ 1.23
U2AF1-203ENST00000398137 P3H2Q8IVL5 708 aa22.74■■□□□ 1.23
U2AF1-203ENST00000398137 OSTF1Q92882 214 aa22.74■■□□□ 1.23
U2AF1-203ENST00000398137 POLR2J2Q9GZM3 115 aaKnown RBP22.74■■□□□ 1.23
U2AF1-203ENST00000398137 POLR2J3Q9H1A7 115 aaKnown RBP22.74■■□□□ 1.23
U2AF1-203ENST00000398137 MMADHCQ9H3L0 296 aaPredicted RBP22.74■■□□□ 1.23
U2AF1-203ENST00000398137 ENPP4Q9Y6X5 453 aa22.74■■□□□ 1.23
U2AF1-203ENST00000398137 IGKV1D-42A0A075B6H8 117 aa22.73■■□□□ 1.23
U2AF1-203ENST00000398137 A0A087WUJ7 227 aa22.73■■□□□ 1.23
U2AF1-203ENST00000398137 A8MVM7 634 aa22.73■■□□□ 1.23
U2AF1-203ENST00000398137 FKBP2P26885 142 aaKnown RBP22.73■■□□□ 1.23
U2AF1-203ENST00000398137 TIMP3P35625 211 aa22.73■■□□□ 1.23
U2AF1-203ENST00000398137 CLK1P49759 484 aaKnown RBP22.73■■□□□ 1.23
U2AF1-203ENST00000398137 DIO1P49895 249 aa22.73■■□□□ 1.23
U2AF1-203ENST00000398137 SNTB1Q13884 538 aaKnown RBP22.73■■□□□ 1.23
U2AF1-203ENST00000398137 PON3Q15166 354 aa22.73■■□□□ 1.23
U2AF1-203ENST00000398137 C7orf34Q96L11 122 aa22.73■■□□□ 1.23
U2AF1-203ENST00000398137 SEPHS2Q99611 448 aa22.73■■□□□ 1.23
U2AF1-203ENST00000398137 RIMS3Q9UJD0 308 aa22.73■■□□□ 1.23
U2AF1-203ENST00000398137 A4GNTQ9UNA3 340 aa22.73■■□□□ 1.23
U2AF1-203ENST00000398137 HDGFL3Q9Y3E1 203 aa22.73■■□□□ 1.23
U2AF1-203ENST00000398137 CCDC168Q8NDH2 2452 aa22.73■■□□□ 1.23
U2AF1-203ENST00000398137 CD8B2A6NJW9 211 aa22.72■■□□□ 1.23
U2AF1-203ENST00000398137 SLC22A20A6NK97 555 aa22.72■■□□□ 1.23
U2AF1-203ENST00000398137 HSPB2A8KAH6 182 aa22.72■■□□□ 1.23
U2AF1-203ENST00000398137 ERFP50548 548 aa22.72■■□□□ 1.23
U2AF1-203ENST00000398137 EGR4Q05215 589 aa22.72■■□□□ 1.23
U2AF1-203ENST00000398137 HSPB2Q16082 182 aa22.72■■□□□ 1.23
U2AF1-203ENST00000398137 C1orf140Q5VVS0 124 aa22.72■■□□□ 1.23
U2AF1-203ENST00000398137 TMPPEQ6ZT21 453 aa22.72■■□□□ 1.23
U2AF1-203ENST00000398137 CYP4Z1Q86W10 505 aa22.72■■□□□ 1.23
U2AF1-203ENST00000398137 FNDC9Q8TBE3 224 aa22.72■■□□□ 1.23
U2AF1-203ENST00000398137 STK35Q8TDR2 534 aa22.72■■□□□ 1.23
U2AF1-203ENST00000398137 CALHM2Q9HA72 323 aa22.72■■□□□ 1.23
U2AF1-203ENST00000398137 PAQR5Q9NXK6 330 aaPredicted RBP22.72■■□□□ 1.23
U2AF1-203ENST00000398137 NDUFAF4Q9P032 175 aa22.72■■□□□ 1.23
U2AF1-203ENST00000398137 RHCGQ9UBD6 479 aa22.72■■□□□ 1.23
U2AF1-203ENST00000398137 KCNN3Q9UGI6 736 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms