RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 TMEM65Q6PI78 240 aa16.86■□□□□ 0.29
CHRFAM7A-202ENST00000397827 DEFB119Q8N690 84 aa16.86■□□□□ 0.29
CHRFAM7A-202ENST00000397827 SMRP1Q8NCR6 262 aa16.86■□□□□ 0.29
CHRFAM7A-202ENST00000397827 OR5M3Q8NGP4 307 aa16.86■□□□□ 0.29
CHRFAM7A-202ENST00000397827 OR13C5Q8NGS8 318 aa16.86■□□□□ 0.29
CHRFAM7A-202ENST00000397827 OR10Z1Q8NGY1 313 aa16.86■□□□□ 0.29
CHRFAM7A-202ENST00000397827 OR5J2Q8NH18 312 aa16.86■□□□□ 0.29
CHRFAM7A-202ENST00000397827 RNF121Q9H920 327 aa16.86■□□□□ 0.29
CHRFAM7A-202ENST00000397827 SCPEP1Q9HB40 452 aa16.86■□□□□ 0.29
CHRFAM7A-202ENST00000397827 HSPB11Q9Y547 144 aa16.86■□□□□ 0.29
CHRFAM7A-202ENST00000397827 C10orf142B7Z368 130 aa16.85■□□□□ 0.29
CHRFAM7A-202ENST00000397827 TSC22D2O75157 780 aa16.85■□□□□ 0.29
CHRFAM7A-202ENST00000397827 RNH1P13489 461 aaKnown RBP16.85■□□□□ 0.29
CHRFAM7A-202ENST00000397827 PYCR1P32322 319 aa16.85■□□□□ 0.29
CHRFAM7A-202ENST00000397827 MTNR1BP49286 362 aa16.85■□□□□ 0.29
CHRFAM7A-202ENST00000397827 GZMKP49863 264 aa16.85■□□□□ 0.29
CHRFAM7A-202ENST00000397827 OR4C3Q8NH37 302 aa16.85■□□□□ 0.29
CHRFAM7A-202ENST00000397827 ZMYND19Q96E35 227 aaPredicted RBP16.85■□□□□ 0.29
CHRFAM7A-202ENST00000397827 AHCYL2Q96HN2 611 aaKnown RBP16.85■□□□□ 0.29
CHRFAM7A-202ENST00000397827 FRMD6Q96NE9 622 aa16.85■□□□□ 0.29
CHRFAM7A-202ENST00000397827 TRIM2Q9C040 744 aa16.85■□□□□ 0.29
CHRFAM7A-202ENST00000397827 CCDC86Q9H6F5 360 aaKnown RBP16.85■□□□□ 0.29
CHRFAM7A-202ENST00000397827 EXTL2Q9UBQ6 330 aa16.85■□□□□ 0.29
CHRFAM7A-202ENST00000397827 HIST1H1CP16403 213 aaKnown RBP16.85■□□□□ 0.29
CHRFAM7A-202ENST00000397827 CBX5P45973 191 aa16.85■□□□□ 0.29
CHRFAM7A-202ENST00000397827 MAP2K3P46734 347 aa16.85■□□□□ 0.29
CHRFAM7A-202ENST00000397827 RPS5P46782 204 aaKnown RBP16.85■□□□□ 0.29
CHRFAM7A-202ENST00000397827 CREB3L2Q70SY1 520 aa16.85■□□□□ 0.29
CHRFAM7A-202ENST00000397827 CEACAM19Q7Z692 300 aa16.85■□□□□ 0.29
CHRFAM7A-202ENST00000397827 SLC23A1Q9UHI7 598 aa16.85■□□□□ 0.29
CHRFAM7A-202ENST00000397827 ERVK-19Q9WJR5 959 aa16.85■□□□□ 0.29
CHRFAM7A-202ENST00000397827 ADAM18Q9Y3Q7 739 aa16.85■□□□□ 0.29
CHRFAM7A-202ENST00000397827 PLPP2O43688 288 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 CT45A8P0DMV1 189 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 CT45A9P0DMV2 189 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 GALP22466 123 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 SLC6A6P31641 620 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 PRTGQ2VWP7 1150 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 CT45A2Q5DJT8 189 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 PAMR1Q6UXH9 720 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 FAM98AQ8NCA5 519 aaKnown RBP16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 KLHL1Q9NR64 748 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 PRTFDC1Q9NRG1 225 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 CLDN16Q9Y5I7 305 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 A0A1W2PPK0 400 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 MCIDASD6RGH6 385 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 IMPA2O14732 288 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 FGFBP1Q14512 234 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 QPRTQ15274 297 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 TP53I3Q53FA7 332 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 METAP1DQ6UB28 335 aaPredicted RBP16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 ARSKQ6UWY0 536 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 C16orf52Q8NHV5 167 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 ABHD4Q8TB40 342 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 MARC2Q969Z3 335 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 KLHDC7BQ96G42 594 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 DGAT2Q96PD7 388 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 LMF1Q96S06 567 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 INPP5EQ9NRR6 644 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 NLKQ9UBE8 527 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 RPS6KB2Q9UBS0 482 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 OR10H1Q9Y4A9 318 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 IER3IP1Q9Y5U9 82 aa16.84■□□□□ 0.29
CHRFAM7A-202ENST00000397827 CIB4A0PJX0 185 aa16.83■□□□□ 0.29
CHRFAM7A-202ENST00000397827 CTNSO60931 367 aa16.83■□□□□ 0.29
CHRFAM7A-202ENST00000397827 HLA-DQB1P01920 261 aa16.83■□□□□ 0.29
CHRFAM7A-202ENST00000397827 F8A1P23610 371 aa16.83■□□□□ 0.29
CHRFAM7A-202ENST00000397827 ULK3Q6PHR2 472 aa16.83■□□□□ 0.29
CHRFAM7A-202ENST00000397827 PLET1Q6UQ28 207 aa16.83■□□□□ 0.29
CHRFAM7A-202ENST00000397827 OR8H1Q8NGG4 311 aa16.83■□□□□ 0.29
CHRFAM7A-202ENST00000397827 PGLYRP3Q96LB9 341 aa16.83■□□□□ 0.29
CHRFAM7A-202ENST00000397827 TMEM43Q9BTV4 400 aa16.83■□□□□ 0.29
CHRFAM7A-202ENST00000397827 TPSD1Q9BZJ3 242 aa16.83■□□□□ 0.29
CHRFAM7A-202ENST00000397827 Q9N2J8 555 aa16.83■□□□□ 0.29
CHRFAM7A-202ENST00000397827 RASD1Q9Y272 281 aa16.83■□□□□ 0.29
CHRFAM7A-202ENST00000397827 TMEM184BQ9Y519 407 aaPredicted RBP16.83■□□□□ 0.29
CHRFAM7A-202ENST00000397827 ARPC4-TTLL3A0A0A6YYG9 625 aa16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 A0A1W2PRG6 482 aa16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 TOR1AO14656 332 aa16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 PAHP00439 452 aa16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 TFP02787 698 aa16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 IFI6P09912 130 aa16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 NAA10P41227 235 aaPredicted RBP16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 RBM34P42696 430 aaKnown RBP16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 CCR5P51681 352 aa16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ZMYND11Q15326 602 aa16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 CCDC85BQ15834 202 aaPredicted RBP16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 HBMQ6B0K9 141 aa16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 ARHGAP11AQ6P4F7 1023 aa16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 GPALPP1Q8IXQ4 340 aa16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 GATSQ8NAP1 163 aa16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 MMABQ96EY8 250 aaPredicted RBP16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 WACQ9BTA9 647 aa16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 PCDHGB7Q9Y5F8 929 aa16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 SEC16AO15027 2179 aa16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 LYRM1O43325 122 aa16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 CSTAP01040 98 aa16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 GPR3P46089 330 aa16.83■□□□□ 0.28
CHRFAM7A-202ENST00000397827 LINC00114Q6XXX2 140 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms