RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 OR4C3Q8NH37 302 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 SNRNP27Q8WVK2 155 aaKnown RBP13.57□□□□□ -0.24
CAPN3-207ENST00000397200 SLC38A2Q96QD8 506 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 OR5M11Q96RB7 305 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 ZNF559Q9BR84 538 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 UTP23Q9BRU9 249 aaKnown RBP13.57□□□□□ -0.24
CAPN3-207ENST00000397200 SLIRPQ9GZT3 109 aaKnown RBP13.57□□□□□ -0.24
CAPN3-207ENST00000397200 FGF20Q9NP95 211 aaPredicted RBP13.57□□□□□ -0.24
CAPN3-207ENST00000397200 ANKRD10Q9NXR5 420 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 FLRT3Q9NZU0 649 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 IRGMA1A4Y4 181 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 M0R3G1 203 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 WDPCPO95876 746 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 F10P00742 488 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 NGFRP08138 427 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 EVI2BP34910 448 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 GPR4P46093 362 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 TUBA1BP68363 451 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 PRKCDQ05655 676 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 FGFBP1Q14512 234 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 SNAPC1Q16533 368 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 DGUOKQ16854 277 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 TMEM44Q2T9K0 475 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 PGGHGQ32M88 737 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 TUBA3EQ6PEY2 450 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 RTL4Q6ZR62 310 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 TUBA1AQ71U36 451 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 ATCAYQ86WG3 371 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 MEX3DQ86XN8 651 aaKnown RBP13.57□□□□□ -0.24
CAPN3-207ENST00000397200 PROKR2Q8NFJ6 384 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 OIT3Q8WWZ8 545 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 LRR1Q96L50 414 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 SGCZQ96LD1 299 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 OPALINQ96PE5 141 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 MGLLQ99685 303 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 ZNF426Q9BUY5 554 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 TBL1XR1Q9BZK7 514 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 AKIP1Q9NQ31 210 aa13.57□□□□□ -0.24
CAPN3-207ENST00000397200 DNAJB12Q9NXW2 375 aaKnown RBP13.57□□□□□ -0.24
CAPN3-207ENST00000397200 A0A0B4J2E0 115 aa13.56□□□□□ -0.24
CAPN3-207ENST00000397200 A0A1B0GX12 115 aa13.56□□□□□ -0.24
CAPN3-207ENST00000397200 CDC42EP2O14613 210 aa13.56□□□□□ -0.24
CAPN3-207ENST00000397200 SURF4O15260 269 aa13.56□□□□□ -0.24
CAPN3-207ENST00000397200 SCG5P05408 212 aa13.56□□□□□ -0.24
CAPN3-207ENST00000397200 GKN3PP0CG01 181 aa13.56□□□□□ -0.24
CAPN3-207ENST00000397200 SERPINB10P48595 397 aa13.56□□□□□ -0.24
CAPN3-207ENST00000397200 CTBP2P56545 445 aa13.56□□□□□ -0.24
CAPN3-207ENST00000397200 LSM3P62310 102 aaKnown RBP13.56□□□□□ -0.24
CAPN3-207ENST00000397200 FOXK2Q01167 660 aa13.56□□□□□ -0.24
CAPN3-207ENST00000397200 TBR1Q16650 682 aa13.56□□□□□ -0.24
CAPN3-207ENST00000397200 TMPRSS11FQ6ZWK6 438 aa13.56□□□□□ -0.24
CAPN3-207ENST00000397200 BCDIN3DQ7Z5W3 292 aaKnown RBP13.56□□□□□ -0.24
CAPN3-207ENST00000397200 CMIPQ8IY22 773 aa13.56□□□□□ -0.24
CAPN3-207ENST00000397200 NANOGP1Q8N7R0 232 aa13.56□□□□□ -0.24
CAPN3-207ENST00000397200 OR52I1Q8NGK6 324 aa13.56□□□□□ -0.24
CAPN3-207ENST00000397200 TMEM239Q8WW34 195 aa13.56□□□□□ -0.24
CAPN3-207ENST00000397200 CNOT9Q92600 299 aaKnown RBP13.56□□□□□ -0.24
CAPN3-207ENST00000397200 SECISBP2Q96T21 854 aaKnown RBP13.56□□□□□ -0.24
CAPN3-207ENST00000397200 MND1Q9BWT6 205 aa13.56□□□□□ -0.24
CAPN3-207ENST00000397200 RNF32Q9H0A6 362 aa13.56□□□□□ -0.24
CAPN3-207ENST00000397200 METTL7AQ9H8H3 244 aa13.56□□□□□ -0.24
CAPN3-207ENST00000397200 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.56□□□□□ -0.24
CAPN3-207ENST00000397200 TBC1D23Q9NUY8 699 aa13.56□□□□□ -0.24
CAPN3-207ENST00000397200 PLA2G3Q9NZ20 509 aa13.56□□□□□ -0.24
CAPN3-207ENST00000397200 KLRF1Q9NZS2 232 aa13.56□□□□□ -0.24
CAPN3-207ENST00000397200 LRFN1Q9P244 771 aa13.56□□□□□ -0.24
CAPN3-207ENST00000397200 TMEM5Q9Y2B1 443 aa13.56□□□□□ -0.24
CAPN3-207ENST00000397200 CHCHD2Q9Y6H1 151 aaPredicted RBP13.56□□□□□ -0.24
CAPN3-207ENST00000397200 A3GALT2U3KPV4 340 aa13.56□□□□□ -0.24
CAPN3-207ENST00000397200 PTPRQQ9UMZ3 2332 aa13.56□□□□□ -0.24
CAPN3-207ENST00000397200 CCRL2O00421 344 aa13.55□□□□□ -0.24
CAPN3-207ENST00000397200 CHP2O43745 196 aa13.55□□□□□ -0.24
CAPN3-207ENST00000397200 FADS1O60427 444 aa13.55□□□□□ -0.24
CAPN3-207ENST00000397200 RAB36O95755 333 aa13.55□□□□□ -0.24
CAPN3-207ENST00000397200 ITGB2P05107 769 aa13.55□□□□□ -0.24
CAPN3-207ENST00000397200 CD96P40200 585 aa13.55□□□□□ -0.24
CAPN3-207ENST00000397200 OPRL1P41146 370 aa13.55□□□□□ -0.24
CAPN3-207ENST00000397200 ACAA2P42765 397 aaKnown RBP13.55□□□□□ -0.24
CAPN3-207ENST00000397200 RNF144AP50876 292 aaPredicted RBP13.55□□□□□ -0.24
CAPN3-207ENST00000397200 ARG2P78540 354 aa13.55□□□□□ -0.24
CAPN3-207ENST00000397200 RAB40BQ12829 278 aa13.55□□□□□ -0.24
CAPN3-207ENST00000397200 SSX1Q16384 188 aa13.55□□□□□ -0.24
CAPN3-207ENST00000397200 KLHL26Q53HC5 615 aa13.55□□□□□ -0.24
CAPN3-207ENST00000397200 AADACL4Q5VUY2 407 aa13.55□□□□□ -0.24
CAPN3-207ENST00000397200 SLC22A10Q63ZE4 541 aa13.55□□□□□ -0.24
CAPN3-207ENST00000397200 USP43Q70EL4 1123 aa13.55□□□□□ -0.24
CAPN3-207ENST00000397200 LSMEM1Q8N8F7 131 aa13.55□□□□□ -0.24
CAPN3-207ENST00000397200 GRHL3Q8TE85 626 aa13.55□□□□□ -0.24
CAPN3-207ENST00000397200 PAQR8Q8TEZ7 354 aa13.55□□□□□ -0.24
CAPN3-207ENST00000397200 ZHX1-C8orf76Q96EF9 292 aa13.55□□□□□ -0.24
CAPN3-207ENST00000397200 SH3YL1Q96HL8 342 aaPredicted RBP13.55□□□□□ -0.24
CAPN3-207ENST00000397200 SMAD5Q99717 465 aaKnown RBP13.55□□□□□ -0.24
CAPN3-207ENST00000397200 DCSTAMPQ9H295 470 aa13.55□□□□□ -0.24
CAPN3-207ENST00000397200 B3GNT3Q9Y2A9 372 aa13.55□□□□□ -0.24
CAPN3-207ENST00000397200 PCDHGA9Q9Y5G4 932 aaKnown RBP13.55□□□□□ -0.24
CAPN3-207ENST00000397200 CFAP47Q6ZTR5 3102 aa13.55□□□□□ -0.24
CAPN3-207ENST00000397200 A0A1W2PQD3 144 aa13.54□□□□□ -0.24
CAPN3-207ENST00000397200 OR5H15A6NDH6 313 aa13.54□□□□□ -0.24
CAPN3-207ENST00000397200 SERINC4A6NH21 518 aa13.54□□□□□ -0.24
CAPN3-207ENST00000397200 SNTNA6NMZ2 147 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms