RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 TMEM99Q8N816 258 aa16.58■□□□□ 0.24
MCF2L-207ENST00000397024 OR52N5Q8NH56 324 aa16.58■□□□□ 0.24
MCF2L-207ENST00000397024 GTF2H4Q92759 462 aa16.58■□□□□ 0.24
MCF2L-207ENST00000397024 TMEM19Q96HH6 336 aa16.58■□□□□ 0.24
MCF2L-207ENST00000397024 RSPO3Q9BXY4 272 aaPredicted RBP16.58■□□□□ 0.24
MCF2L-207ENST00000397024 PAIP1Q9H074 479 aaKnown RBP16.58■□□□□ 0.24
MCF2L-207ENST00000397024 ASB6Q9NWX5 421 aa16.58■□□□□ 0.24
MCF2L-207ENST00000397024 CISD1Q9NZ45 108 aaKnown RBP16.58■□□□□ 0.24
MCF2L-207ENST00000397024 P2RX2Q9UBL9 471 aa16.58■□□□□ 0.24
MCF2L-207ENST00000397024 MALT1Q9UDY8 824 aa16.58■□□□□ 0.24
MCF2L-207ENST00000397024 PCDHB14Q9Y5E9 798 aa16.58■□□□□ 0.24
MCF2L-207ENST00000397024 SLC25A15Q9Y619 301 aa16.58■□□□□ 0.24
MCF2L-207ENST00000397024 USH1CQ9Y6N9 552 aa16.58■□□□□ 0.24
MCF2L-207ENST00000397024 A0A1W2PP18 115 aa16.57■□□□□ 0.24
MCF2L-207ENST00000397024 CIB4A0PJX0 185 aa16.57■□□□□ 0.24
MCF2L-207ENST00000397024 LIPT2A6NK58 231 aa16.57■□□□□ 0.24
MCF2L-207ENST00000397024 CCT8L1PA6NM43 557 aa16.57■□□□□ 0.24
MCF2L-207ENST00000397024 PDLIM1O00151 329 aa16.57■□□□□ 0.24
MCF2L-207ENST00000397024 ABCD4O14678 606 aa16.57■□□□□ 0.24
MCF2L-207ENST00000397024 EIF1BO60739 113 aaKnown RBP16.57■□□□□ 0.24
MCF2L-207ENST00000397024 THBS1P07996 1170 aa16.57■□□□□ 0.24
MCF2L-207ENST00000397024 HOXB9P17482 250 aaPredicted RBP16.57■□□□□ 0.24
MCF2L-207ENST00000397024 ZNF83P51522 516 aa16.57■□□□□ 0.24
MCF2L-207ENST00000397024 CEACAM7Q14002 265 aa16.57■□□□□ 0.24
MCF2L-207ENST00000397024 C9orf135Q5VTT2 229 aa16.57■□□□□ 0.24
MCF2L-207ENST00000397024 SLC2A7Q6PXP3 512 aa16.57■□□□□ 0.24
MCF2L-207ENST00000397024 MSANTD1Q6ZTZ1 278 aa16.57■□□□□ 0.24
MCF2L-207ENST00000397024 ZNF440Q8IYI8 595 aa16.57■□□□□ 0.24
MCF2L-207ENST00000397024 MUS81Q96NY9 551 aa16.57■□□□□ 0.24
MCF2L-207ENST00000397024 NAA11Q9BSU3 229 aaPredicted RBP16.57■□□□□ 0.24
MCF2L-207ENST00000397024 C1QTNF6Q9BXI9 259 aa16.57■□□□□ 0.24
MCF2L-207ENST00000397024 RMND5AQ9H871 391 aa16.57■□□□□ 0.24
MCF2L-207ENST00000397024 SLC7A10Q9NS82 523 aa16.57■□□□□ 0.24
MCF2L-207ENST00000397024 ZNF443Q9Y2A4 671 aaPredicted RBP16.57■□□□□ 0.24
MCF2L-207ENST00000397024 SONP18583 2426 aaKnown RBP16.56■□□□□ 0.24
MCF2L-207ENST00000397024 DNHD1Q96M86 4753 aa16.56■□□□□ 0.24
MCF2L-207ENST00000397024 FAM234BA2RU67 622 aa16.56■□□□□ 0.24
MCF2L-207ENST00000397024 ERLIN1O75477 346 aa16.56■□□□□ 0.24
MCF2L-207ENST00000397024 AKR7A3O95154 331 aa16.56■□□□□ 0.24
MCF2L-207ENST00000397024 CXCR1P25024 350 aa16.56■□□□□ 0.24
MCF2L-207ENST00000397024 PCSK6P29122 969 aa16.56■□□□□ 0.24
MCF2L-207ENST00000397024 MAP2K6P52564 334 aa16.56■□□□□ 0.24
MCF2L-207ENST00000397024 CRISP3P54108 245 aa16.56■□□□□ 0.24
MCF2L-207ENST00000397024 SPOCK1Q08629 439 aa16.56■□□□□ 0.24
MCF2L-207ENST00000397024 CLEC12BQ2HXU8 276 aa16.56■□□□□ 0.24
MCF2L-207ENST00000397024 LIN52Q52LA3 116 aa16.56■□□□□ 0.24
MCF2L-207ENST00000397024 C6orf10Q5SRN2 563 aa16.56■□□□□ 0.24
MCF2L-207ENST00000397024 TSPO2Q5TGU0 170 aa16.56■□□□□ 0.24
MCF2L-207ENST00000397024 PAQR6Q6TCH4 344 aa16.56■□□□□ 0.24
MCF2L-207ENST00000397024 CASP12Q6UXS9 341 aa16.56■□□□□ 0.24
MCF2L-207ENST00000397024 FUNDC1Q8IVP5 155 aa16.56■□□□□ 0.24
MCF2L-207ENST00000397024 MIER2Q8N344 545 aa16.56■□□□□ 0.24
MCF2L-207ENST00000397024 CADM2Q8N3J6 435 aa16.56■□□□□ 0.24
MCF2L-207ENST00000397024 WDR31Q8NA23 367 aa16.56■□□□□ 0.24
MCF2L-207ENST00000397024 MAPK1IP1LQ8NDC0 245 aa16.56■□□□□ 0.24
MCF2L-207ENST00000397024 MAL2Q969L2 176 aa16.56■□□□□ 0.24
MCF2L-207ENST00000397024 TRAF4Q9BUZ4 470 aaPredicted RBP16.56■□□□□ 0.24
MCF2L-207ENST00000397024 HEATR1Q9H583 2144 aaKnown RBP16.56■□□□□ 0.24
MCF2L-207ENST00000397024 TAS2R16Q9NYV7 291 aa16.56■□□□□ 0.24
MCF2L-207ENST00000397024 CALML5Q9NZT1 146 aa16.56■□□□□ 0.24
MCF2L-207ENST00000397024 A0A0G2JPF8 293 aa16.55■□□□□ 0.24
MCF2L-207ENST00000397024 HNRNPCL2B2RXH8 293 aa16.55■□□□□ 0.24
MCF2L-207ENST00000397024 HNRNPCL3B7ZW38 293 aa16.55■□□□□ 0.24
MCF2L-207ENST00000397024 E7EQL1 145 aa16.55■□□□□ 0.24
MCF2L-207ENST00000397024 HNRNPCL1O60812 293 aaKnown RBP16.55■□□□□ 0.24
MCF2L-207ENST00000397024 IGHV4-39P01824 125 aa16.55■□□□□ 0.24
MCF2L-207ENST00000397024 HNRNPCL4P0DMR1 293 aa16.55■□□□□ 0.24
MCF2L-207ENST00000397024 UQCRBP14927 111 aa16.55■□□□□ 0.24
MCF2L-207ENST00000397024 IDUAP35475 653 aa16.55■□□□□ 0.24
MCF2L-207ENST00000397024 ACVR1BP36896 505 aa16.55■□□□□ 0.24
MCF2L-207ENST00000397024 CDH11P55287 796 aa16.55■□□□□ 0.24
MCF2L-207ENST00000397024 HOXC5Q00444 222 aa16.55■□□□□ 0.24
MCF2L-207ENST00000397024 KRTAP1-1Q07627 177 aa16.55■□□□□ 0.24
MCF2L-207ENST00000397024 RGNQ15493 299 aa16.55■□□□□ 0.24
MCF2L-207ENST00000397024 OR7A5Q15622 319 aa16.55■□□□□ 0.24
MCF2L-207ENST00000397024 OTUD3Q5T2D3 398 aaPredicted RBP16.55■□□□□ 0.24
MCF2L-207ENST00000397024 SERPINA11Q86U17 422 aa16.55■□□□□ 0.24
MCF2L-207ENST00000397024 DTX2Q86UW9 622 aa16.55■□□□□ 0.24
MCF2L-207ENST00000397024 GTPBP3Q969Y2 492 aaKnown RBP16.55■□□□□ 0.24
MCF2L-207ENST00000397024 ZNF385AQ96PM9 386 aaKnown RBP16.55■□□□□ 0.24
MCF2L-207ENST00000397024 SPATA9Q9BWV2 254 aa16.55■□□□□ 0.24
MCF2L-207ENST00000397024 SLCO1B3Q9NPD5 702 aa16.55■□□□□ 0.24
MCF2L-207ENST00000397024 PARPBPQ9NWS1 579 aa16.55■□□□□ 0.24
MCF2L-207ENST00000397024 SLAMF8Q9P0V8 285 aa16.55■□□□□ 0.24
MCF2L-207ENST00000397024 GDF2Q9UK05 429 aaPredicted RBP16.55■□□□□ 0.24
MCF2L-207ENST00000397024 ZNF232Q9UNY5 417 aa16.55■□□□□ 0.24
MCF2L-207ENST00000397024 SLC9A8Q9Y2E8 581 aa16.55■□□□□ 0.24
MCF2L-207ENST00000397024 RNF223E7ERA6 249 aa16.54■□□□□ 0.24
MCF2L-207ENST00000397024 CLIC1O00299 241 aa16.54■□□□□ 0.24
MCF2L-207ENST00000397024 FRS3O43559 492 aa16.54■□□□□ 0.24
MCF2L-207ENST00000397024 GPIP06744 558 aa16.54■□□□□ 0.24
MCF2L-207ENST00000397024 CD40P25942 277 aa16.54■□□□□ 0.24
MCF2L-207ENST00000397024 IDH3AP50213 366 aa16.54■□□□□ 0.24
MCF2L-207ENST00000397024 P2RY4P51582 365 aa16.54■□□□□ 0.24
MCF2L-207ENST00000397024 SLC25A3Q00325 362 aa16.54■□□□□ 0.24
MCF2L-207ENST00000397024 LARS2Q15031 903 aaKnown RBP16.54■□□□□ 0.24
MCF2L-207ENST00000397024 AGBL2Q5U5Z8 902 aa16.54■□□□□ 0.24
MCF2L-207ENST00000397024 RNF220Q5VTB9 566 aa16.54■□□□□ 0.24
MCF2L-207ENST00000397024 WBP2NLQ6ICG8 309 aa16.54■□□□□ 0.24
MCF2L-207ENST00000397024 MSRB3Q8IXL7 192 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms