RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 TIMM29Q9BSF4 260 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 ZNF426Q9BUY5 554 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 PRUNE2Q8WUY3 3088 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 MFSD2BA6NFX1 497 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 IGLON5A6NGN9 336 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 SULT1B1O43704 296 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 OR2A4O95047 310 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 ADRB1P08588 477 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 ACSM4P0C7M7 580 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 GKN3PP0CG01 181 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 MAT2AP31153 395 aaKnown RBP12.26□□□□□ -0.45
TRIM40-207ENST00000396581 PTGS2P35354 604 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 SLC16A1P53985 500 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 SEC13P55735 322 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 AP3S2P59780 193 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 TSPAN5P62079 268 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 SIRPAP78324 504 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 BTN3A2P78410 334 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 PLAURQ03405 335 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 RPE65Q16518 533 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 TMEM196Q5HYL7 178 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 FHL5Q5TD97 284 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 RPL22L1Q6P5R6 122 aaKnown RBP12.26□□□□□ -0.45
TRIM40-207ENST00000396581 ZNF613Q6PF04 617 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 GLDNQ6ZMI3 551 aaPredicted RBP12.26□□□□□ -0.45
TRIM40-207ENST00000396581 RFLNBQ8N5W9 214 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 SMAP2Q8WU79 429 aaPredicted RBP12.26□□□□□ -0.45
TRIM40-207ENST00000396581 PMM1Q92871 262 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 SLC25A38Q96DW6 304 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 KLHL15Q96M94 604 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 ZNF578Q96N58 590 aaPredicted RBP12.26□□□□□ -0.45
TRIM40-207ENST00000396581 OR2A7Q96R45 310 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 DDOQ99489 341 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 EVA1AQ9H8M9 152 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 OR6C2Q9NZP2 312 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 FLVCR2Q9UPI3 526 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 RCE1Q9Y256 329 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 ATG2BQ96BY7 2078 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 MYO10Q9HD67 2058 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 TICRRQ7Z2Z1 1910 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 OR2M5A3KFT3 312 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 GALR3O60755 368 aaPredicted RBP12.25□□□□□ -0.45
TRIM40-207ENST00000396581 IL5P05113 134 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 IFNGR1P15260 489 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 CXCL2P19875 107 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 DPP4P27487 766 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 MNDAP41218 407 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 GPR68Q15743 365 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 DCST2Q5T1A1 773 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 ARHGAP11AQ6P4F7 1023 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 VN1R4Q7Z5H5 301 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 IQCF2Q8IXL9 164 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 POMGNT2Q8NAT1 580 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 NT5CQ8TCD5 201 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 PCNPQ8WW12 178 aaKnown RBP12.25□□□□□ -0.45
TRIM40-207ENST00000396581 FAM131CQ96AQ9 280 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 GFI1Q99684 422 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 C14orf105Q9NVL8 296 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 SERGEFQ9UGK8 458 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 ING1Q9UK53 422 aaPredicted RBP12.25□□□□□ -0.45
TRIM40-207ENST00000396581 FBXL21Q9UKT6 434 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 C19orf53Q9UNZ5 99 aaPredicted RBP12.25□□□□□ -0.45
TRIM40-207ENST00000396581 CA5BQ9Y2D0 317 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 AK6Q9Y3D8 172 aaKnown RBP12.25□□□□□ -0.45
TRIM40-207ENST00000396581 TRPM6Q9BX84 2022 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 TRAV27A0A087WT01 109 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 C2CD4DB7Z1M9 353 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 AIPO00170 330 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 GPRIN2O60269 458 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 TOXO94900 526 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 PPP1R3DO95685 299 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 SMIM10L1P0DMW3 83 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 CMPK1P30085 196 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 CALCRP30988 508 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 MAP3K8P41279 467 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 VEGFCP49767 419 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 ILF3Q12906 894 aaKnown RBP eCLIP12.25□□□□□ -0.45
TRIM40-207ENST00000396581 TP53I3Q53FA7 332 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 ZNF776Q68DI1 518 aaPredicted RBP12.25□□□□□ -0.45
TRIM40-207ENST00000396581 SFRP4Q6FHJ7 346 aaPredicted RBP12.25□□□□□ -0.45
TRIM40-207ENST00000396581 RGS7BPQ6MZT1 257 aaPredicted RBP12.25□□□□□ -0.45
TRIM40-207ENST00000396581 C3P1Q6ZMU1 363 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 DNM1P46Q6ZS02 220 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 USP53Q70EK8 1073 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 LSRQ86X29 649 aaPredicted RBP12.25□□□□□ -0.45
TRIM40-207ENST00000396581 CYB561A3Q8NBI2 242 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 OR4K14Q8NGD5 310 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 DACT3Q96B18 629 aaPredicted RBP12.25□□□□□ -0.45
TRIM40-207ENST00000396581 SMIM10Q96HG1 83 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 SFXN2Q96NB2 322 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 OR14A2Q96R54 314 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 STACQ99469 402 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 CDCP1Q9H5V8 836 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 C8orf33Q9H7E9 229 aaPredicted RBP12.25□□□□□ -0.45
TRIM40-207ENST00000396581 FBRSQ9HAH7 460 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 BEX1Q9HBH7 125 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 MCCC2Q9HCC0 563 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 MBNL1Q9NR56 388 aaKnown RBP12.25□□□□□ -0.45
TRIM40-207ENST00000396581 DUSP22Q9NRW4 184 aa12.25□□□□□ -0.45
TRIM40-207ENST00000396581 SPHK1Q9NYA1 384 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms