RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 SNX4O95219 450 aa11.5□□□□□ -0.57
TRIM39-204ENST00000396548 JUNBP17275 347 aaPredicted RBP11.5□□□□□ -0.57
TRIM39-204ENST00000396548 RPL5P46777 297 aaKnown RBP11.5□□□□□ -0.57
TRIM39-204ENST00000396548 AADACL4Q5VUY2 407 aa11.5□□□□□ -0.57
TRIM39-204ENST00000396548 CYP4Z2PQ8N1L4 340 aa11.5□□□□□ -0.57
TRIM39-204ENST00000396548 THAP4Q8WY91 577 aa11.5□□□□□ -0.57
TRIM39-204ENST00000396548 FKRPQ9H9S5 495 aa11.5□□□□□ -0.57
TRIM39-204ENST00000396548 DEPPQ9NTK1 212 aa11.5□□□□□ -0.57
TRIM39-204ENST00000396548 STMN3Q9NZ72 180 aa11.5□□□□□ -0.57
TRIM39-204ENST00000396548 KLK13Q9UKR3 277 aa11.5□□□□□ -0.57
TRIM39-204ENST00000396548 LOC400499M0QZD8 3231 aa11.5□□□□□ -0.57
TRIM39-204ENST00000396548 NKX2-8O15522 239 aa11.5□□□□□ -0.57
TRIM39-204ENST00000396548 SLC2A10O95528 541 aa11.5□□□□□ -0.57
TRIM39-204ENST00000396548 CD96P40200 585 aa11.5□□□□□ -0.57
TRIM39-204ENST00000396548 FOXK1P85037 733 aa11.5□□□□□ -0.57
TRIM39-204ENST00000396548 IPCEF1Q8WWN9 437 aaPredicted RBP11.5□□□□□ -0.57
TRIM39-204ENST00000396548 ZNF582Q96NG8 517 aaPredicted RBP11.5□□□□□ -0.57
TRIM39-204ENST00000396548 DDOQ99489 341 aa11.5□□□□□ -0.57
TRIM39-204ENST00000396548 ANKRD10Q9NXR5 420 aa11.5□□□□□ -0.57
TRIM39-204ENST00000396548 BLOC1S6Q9UL45 172 aa11.5□□□□□ -0.57
TRIM39-204ENST00000396548 TPRKBQ9Y3C4 175 aa11.5□□□□□ -0.57
TRIM39-204ENST00000396548 CEP250Q9BV73 2442 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 MCIDASD6RGH6 385 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 TLX2O43763 284 aaPredicted RBP11.49□□□□□ -0.57
TRIM39-204ENST00000396548 ZIC3O60481 467 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 RPS5P46782 204 aaKnown RBP11.49□□□□□ -0.57
TRIM39-204ENST00000396548 NR1H2P55055 460 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 FOXK2Q01167 660 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 MVKQ03426 396 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 PSD4Q8NDX1 1056 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 NRIP3Q9NQ35 241 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 MRPS18AQ9NVS2 196 aaKnown RBP11.49□□□□□ -0.57
TRIM39-204ENST00000396548 VDAC3Q9Y277 283 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 SSUH2Q9Y2M2 353 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 A0A087WZY1 265 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 LRRC3CA6NJW4 275 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 SHISA8B8ZZ34 492 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 EFSO43281 561 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 PIPP12273 146 aaPredicted RBP11.49□□□□□ -0.57
TRIM39-204ENST00000396548 ACVR2AP27037 513 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 ADH6P28332 368 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 CYB561P49447 251 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 MAP2K6P52564 334 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 SNAPC1Q16533 368 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 ANKDD1AQ495B1 522 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 C1orf140Q5VVS0 124 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 TIGD3Q6B0B8 471 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 C5orf46Q6UWT4 87 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 MOSPD2Q8NHP6 518 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 NXPE2Q96DL1 559 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 SIGLEC12Q96PQ1 595 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 CMC2Q9NRP2 79 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 SACM1LQ9NTJ5 587 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 CLN6Q9NWW5 311 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 BAIAP2Q9UQB8 552 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 SPENQ96T58 3664 aaKnown RBP11.49□□□□□ -0.57
TRIM39-204ENST00000396548 AHCTF1Q8WYP5 2266 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 FAM20BO75063 409 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 NDUFB2O95178 105 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 MT-ATP6P00846 226 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 ZNF41P51814 821 aaPredicted RBP11.49□□□□□ -0.57
TRIM39-204ENST00000396548 NUDT6P53370 316 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 FOXO1Q12778 655 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 IRF3Q14653 427 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 MEDAGQ5VYS4 303 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 GTF2IRD2BQ6EKJ0 949 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 DPY19L2P2Q6ZN68 376 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 FAM122BQ7Z309 247 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 GTF2IRD2Q86UP8 949 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 SATL1Q86VE3 508 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 GALNT16Q8N428 558 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 ZBTB8AQ96BR9 441 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 TAS2R5Q9NYW4 299 aa11.49□□□□□ -0.57
TRIM39-204ENST00000396548 CNOT2Q9NZN8 540 aaKnown RBP11.49□□□□□ -0.57
TRIM39-204ENST00000396548 MED13Q9UHV7 2174 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 PINLYPA6NC86 204 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 PTGES3LE9PB15 166 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 HMGN1P05114 100 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 CCNA2P20248 432 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 MASP1P48740 699 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 MLLT10P55197 1068 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 NADK2Q4G0N4 442 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 KCTD8Q6ZWB6 473 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 PRSS48Q7RTY5 328 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 CLEC1AQ8NC01 280 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 ZNF540Q8NDQ6 660 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 OR52L1Q8NGH7 329 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 LRR1Q96L50 414 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 GNRHR2Q96P88 292 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 SLC38A2Q96QD8 506 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 OR11A1Q9GZK7 315 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 RBM38Q9H0Z9 239 aaKnown RBP11.48□□□□□ -0.57
TRIM39-204ENST00000396548 FN3KQ9H479 309 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 SCN3BQ9NY72 215 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 GPR83Q9NYM4 423 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 DNAJC27Q9NZQ0 273 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 GPR52Q9Y2T5 361 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 LAMA5O15230 3695 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 WDPCPO95876 746 aa11.48□□□□□ -0.57
TRIM39-204ENST00000396548 CDK1P06493 297 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms