RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 ADAMTS16Q8TE57 1224 aa17.77■□□□□ 0.44
SNCA-203ENST00000394986 DNAJA4Q8WW22 397 aaPredicted RBP17.77■□□□□ 0.44
SNCA-203ENST00000394986 KTI12Q96EK9 354 aaPredicted RBP17.77■□□□□ 0.44
SNCA-203ENST00000394986 GMPPAQ96IJ6 420 aaPredicted RBP17.77■□□□□ 0.44
SNCA-203ENST00000394986 POTEKPQ9BYX7 375 aa17.77■□□□□ 0.44
SNCA-203ENST00000394986 ADPRHL2Q9NX46 363 aa17.77■□□□□ 0.44
SNCA-203ENST00000394986 SS18L1O75177 396 aaPredicted RBP17.76■□□□□ 0.43
SNCA-203ENST00000394986 NPIPB7O75200 414 aa17.76■□□□□ 0.43
SNCA-203ENST00000394986 SMNDC1O75940 238 aaKnown RBP eCLIP17.76■□□□□ 0.43
SNCA-203ENST00000394986 LYPD3O95274 346 aa17.76■□□□□ 0.43
SNCA-203ENST00000394986 CRHP06850 196 aa17.76■□□□□ 0.43
SNCA-203ENST00000394986 FPR1P21462 350 aa17.76■□□□□ 0.43
SNCA-203ENST00000394986 CCDC103Q8IW40 242 aa17.76■□□□□ 0.43
SNCA-203ENST00000394986 TUSC5Q8IXB3 177 aa17.76■□□□□ 0.43
SNCA-203ENST00000394986 SLC38A4Q969I6 547 aa17.76■□□□□ 0.43
SNCA-203ENST00000394986 SLC47A1Q96FL8 570 aa17.76■□□□□ 0.43
SNCA-203ENST00000394986 HSH2DQ96JZ2 352 aa17.76■□□□□ 0.43
SNCA-203ENST00000394986 PCDHAC1Q9H158 963 aa17.76■□□□□ 0.43
SNCA-203ENST00000394986 OPN3Q9H1Y3 402 aaPredicted RBP17.76■□□□□ 0.43
SNCA-203ENST00000394986 C12orf10Q9HB07 376 aa17.76■□□□□ 0.43
SNCA-203ENST00000394986 SELENONQ9NZV5 590 aa17.76■□□□□ 0.43
SNCA-203ENST00000394986 KLHL13Q9P2N7 655 aa17.76■□□□□ 0.43
SNCA-203ENST00000394986 ING1Q9UK53 422 aaPredicted RBP17.76■□□□□ 0.43
SNCA-203ENST00000394986 SLC7A7Q9UM01 511 aa17.76■□□□□ 0.43
SNCA-203ENST00000394986 LIPT2A6NK58 231 aa17.75■□□□□ 0.43
SNCA-203ENST00000394986 PNMTP11086 282 aa17.75■□□□□ 0.43
SNCA-203ENST00000394986 AGTR1P30556 359 aa17.75■□□□□ 0.43
SNCA-203ENST00000394986 RPS5P46782 204 aaKnown RBP17.75■□□□□ 0.43
SNCA-203ENST00000394986 ASCL1P50553 236 aa17.75■□□□□ 0.43
SNCA-203ENST00000394986 CTBP2P56545 445 aa17.75■□□□□ 0.43
SNCA-203ENST00000394986 SP5Q6BEB4 398 aaPredicted RBP17.75■□□□□ 0.43
SNCA-203ENST00000394986 ABLIM2Q6H8Q1 611 aa17.75■□□□□ 0.43
SNCA-203ENST00000394986 ZNF613Q6PF04 617 aa17.75■□□□□ 0.43
SNCA-203ENST00000394986 WDR88Q6ZMY6 472 aa17.75■□□□□ 0.43
SNCA-203ENST00000394986 STK35Q8TDR2 534 aa17.75■□□□□ 0.43
SNCA-203ENST00000394986 LZICQ8WZA0 190 aa17.75■□□□□ 0.43
SNCA-203ENST00000394986 ZNF775Q96BV0 537 aaPredicted RBP17.75■□□□□ 0.43
SNCA-203ENST00000394986 ZHX1-C8orf76Q96EF9 292 aa17.75■□□□□ 0.43
SNCA-203ENST00000394986 PSD2Q9BQI7 771 aa17.75■□□□□ 0.43
SNCA-203ENST00000394986 PTDSS2Q9BVG9 487 aa17.75■□□□□ 0.43
SNCA-203ENST00000394986 TRAPPC4Q9Y296 219 aa17.75■□□□□ 0.43
SNCA-203ENST00000394986 EMC9Q9Y3B6 208 aa17.75■□□□□ 0.43
SNCA-203ENST00000394986 SNX13Q9Y5W8 968 aa17.75■□□□□ 0.43
SNCA-203ENST00000394986 A0A087WUJ7 227 aa17.74■□□□□ 0.43
SNCA-203ENST00000394986 ARPC2O15144 300 aa17.74■□□□□ 0.43
SNCA-203ENST00000394986 CYTIPO60759 359 aa17.74■□□□□ 0.43
SNCA-203ENST00000394986 PRKD3O94806 890 aa17.74■□□□□ 0.43
SNCA-203ENST00000394986 AKR7A3O95154 331 aa17.74■□□□□ 0.43
SNCA-203ENST00000394986 SLC35A1P78382 337 aa17.74■□□□□ 0.43
SNCA-203ENST00000394986 RASGEF1BQ0VAM2 473 aa17.74■□□□□ 0.43
SNCA-203ENST00000394986 FOXD4Q12950 439 aaPredicted RBP17.74■□□□□ 0.43
SNCA-203ENST00000394986 SNTB1Q13884 538 aaKnown RBP17.74■□□□□ 0.43
SNCA-203ENST00000394986 RNPS1Q15287 305 aaKnown RBP17.74■□□□□ 0.43
SNCA-203ENST00000394986 FXNQ16595 210 aa17.74■□□□□ 0.43
SNCA-203ENST00000394986 MED12LQ86YW9 2145 aa17.74■□□□□ 0.43
SNCA-203ENST00000394986 FAM86B1Q8N7N1 296 aa17.74■□□□□ 0.43
SNCA-203ENST00000394986 ZNF300Q96RE9 604 aaPredicted RBP17.74■□□□□ 0.43
SNCA-203ENST00000394986 C12orf49Q9H741 205 aa17.74■□□□□ 0.43
SNCA-203ENST00000394986 TAS2R1Q9NYW7 299 aa17.74■□□□□ 0.43
SNCA-203ENST00000394986 JKAMPQ9P055 326 aa17.74■□□□□ 0.43
SNCA-203ENST00000394986 V9GYQ6 96 aa17.74■□□□□ 0.43
SNCA-203ENST00000394986 CACNA1CQ13936 2221 aa17.73■□□□□ 0.43
SNCA-203ENST00000394986 TRAPPC13A5PLN9 417 aa17.73■□□□□ 0.43
SNCA-203ENST00000394986 CHP2O43745 196 aa17.73■□□□□ 0.43
SNCA-203ENST00000394986 PDE5AO76074 875 aa17.73■□□□□ 0.43
SNCA-203ENST00000394986 AHSA1O95433 338 aa17.73■□□□□ 0.43
SNCA-203ENST00000394986 CGAP01215 116 aa17.73■□□□□ 0.43
SNCA-203ENST00000394986 GPIP06744 558 aa17.73■□□□□ 0.43
SNCA-203ENST00000394986 UQCRC1P31930 480 aa17.73■□□□□ 0.43
SNCA-203ENST00000394986 YAP1P46937 504 aaKnown RBP17.73■□□□□ 0.43
SNCA-203ENST00000394986 PIN1Q13526 163 aaPredicted RBP17.73■□□□□ 0.43
SNCA-203ENST00000394986 SWT1Q5T5J6 900 aaKnown RBP17.73■□□□□ 0.43
SNCA-203ENST00000394986 ZNF787Q6DD87 383 aa17.73■□□□□ 0.43
SNCA-203ENST00000394986 GTF2IRD2BQ6EKJ0 949 aa17.73■□□□□ 0.43
SNCA-203ENST00000394986 FKBP9P1Q75LS8 142 aa17.73■□□□□ 0.43
SNCA-203ENST00000394986 NUFIP2Q7Z417 695 aaKnown RBP17.73■□□□□ 0.43
SNCA-203ENST00000394986 GDF7Q7Z4P5 450 aa17.73■□□□□ 0.43
SNCA-203ENST00000394986 GTF2IRD2Q86UP8 949 aa17.73■□□□□ 0.43
SNCA-203ENST00000394986 SLC43A2Q8N370 569 aa17.73■□□□□ 0.43
SNCA-203ENST00000394986 TMEM99Q8N816 258 aa17.73■□□□□ 0.43
SNCA-203ENST00000394986 TAAR8Q969N4 342 aa17.73■□□□□ 0.43
SNCA-203ENST00000394986 SLC25A36Q96CQ1 311 aa17.73■□□□□ 0.43
SNCA-203ENST00000394986 SLC41A3Q96GZ6 507 aa17.73■□□□□ 0.43
SNCA-203ENST00000394986 TAPBPLQ9BX59 468 aa17.73■□□□□ 0.43
SNCA-203ENST00000394986 AMBRA1Q9C0C7 1298 aa17.73■□□□□ 0.43
SNCA-203ENST00000394986 PIGMQ9H3S5 423 aa17.73■□□□□ 0.43
SNCA-203ENST00000394986 CHST11Q9NPF2 352 aa17.73■□□□□ 0.43
SNCA-203ENST00000394986 GLRX2Q9NS18 164 aa17.73■□□□□ 0.43
SNCA-203ENST00000394986 KLHL9Q9P2J3 617 aa17.73■□□□□ 0.43
SNCA-203ENST00000394986 SEC14L4Q9UDX3 406 aa17.73■□□□□ 0.43
SNCA-203ENST00000394986 MAGEL2Q9UJ55 1249 aa17.73■□□□□ 0.43
SNCA-203ENST00000394986 FTCDNL1E5RQL4 147 aa17.72■□□□□ 0.43
SNCA-203ENST00000394986 DNPH1O43598 174 aa17.72■□□□□ 0.43
SNCA-203ENST00000394986 FUT4P22083 530 aa17.72■□□□□ 0.43
SNCA-203ENST00000394986 CBLP22681 906 aa17.72■□□□□ 0.43
SNCA-203ENST00000394986 TAS2R41P59536 307 aa17.72■□□□□ 0.43
SNCA-203ENST00000394986 H3F3AP84243 136 aa17.72■□□□□ 0.43
SNCA-203ENST00000394986 IFI44LQ53G44 452 aa17.72■□□□□ 0.43
SNCA-203ENST00000394986 OTUD3Q5T2D3 398 aaPredicted RBP17.72■□□□□ 0.43
SNCA-203ENST00000394986 ZNF610Q8N9Z0 462 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms